Larimichthys crocea (large yellow croaker): 104925192
Help
Entry
104925192 CDS
T04659
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104925192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lco04091
]
104925192
Lectins [BR:
lco04091
]
C-Type lectins
Lecticans
104925192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Insulin_TMD
DUF3377
Motif
Other DBs
NCBI-GeneID:
104925192
NCBI-ProteinID:
XP_019125957
LinkDB
All DBs
Position
XXII:complement(7444947..7505131)
Genome browser
AA seq
3134 aa
AA seq
DB search
MFFLITSVSKMFHRLLLCFSLTGLVFAQPDSTGLFYALRSELSEDAILVANNGIRVPFGR
SVFIDPINDLVIQTQPGDRCSITVLDNDPLSQRPGHLSPKKFPCDFGPNDVTYSHYGSRS
PAKDRVRLQLRYDAQTETVIIPFMMEVEVVFTQLELLTKNMPLTVDNLKGTSNPIDKKIL
EFTYDRDSHKCEVTALSSGSALPRYGRLLDGGKLSKMMDCDEFTQADIRYEHTFERKSPN
RDYVPMVVELHDKEGNLVKQEYFHLMIRIKEGEENTPPKPSFVSMMMMEISQFVMTALTP
DMLAAEDAESDPDELIFNITSPLSYEEGYIVSTDDRNLPITSFYQRDLRDLKIAYKPPSL
DSDTERIFQLEFEVVDTDGAVSDPFAFMIVVKPMNSLAPVVTRNTGQLLYEGQSRPLFSA
HNLEISDEDNLDSVTITVVDGLRHGDLMVLGSHRKFFTPADLTTGVVVYMHDGSDTYSDN
IVFKMSDGKNEVEFLFPITIVPTDDEPPIINANTGLVLFKNQMMPISPLMLSAADIDSED
STIKFTIVPPFSNIGTVFLRQSDAPEDPSSWKFNAEDEVYEKEVTEWLQKDITDGKLFYK
HTGPHNTETIMDQFVFTAQDDNDPPNESGENVFIIRVLPIDDVPPELFPGTTLQLTVQEY
KLTQFSKEVLRYTDLDSEDRDLKYTVIQPPTDTDENNPVVFGSLVLTDSPDTEVTEFTQA
QINHHKISYGPPDVELGITAHVVQFRYTVEDTAGNSVEGAFTIYLQPVNNKPPQITNTGF
TVLERGMHIISIAELDTTDVDTASEQITFTLSQLPKHGQLQVALTDLEKKGVFRLEEISE
GKISYIHDGEETVSDEFQLDVSDGIHVVSVTVKVNVKPVDDETPTVSLPAGTIGSHMDVL
ENGATEITTNVIQGHDDDTDDLQLTFIVEDPPAMGEILVKGVPATRFTQADIINGVVVYA
HTGGEIGLPSQQDGFNLTLTDMSDDWTVGGNKVNGVHVRVTILPVDSQAPEVGVGIQFSV
IEGEKYAIGPQHLNADDNDTPTDDILCTIIVQPTAGYVENISPAPGSEKSRSGTAISAFT
IRDIREGNIYYVQSIHKGVEPVEDRFTFRCSDGINFSENHFFPIVIIPANDEKPEIYLRE
IVVMEGMNIVIDTPILNGDDADIPPEELMFIISKPPKHGAILNQLSTGSVLVTNFTLEQI
REASSIIYEHDDSETTEDSFDVTLTDGKYSVQKTAMVLIISVDDETPRMLINDGLEVEIG
ETKEINNKVLKATDLDSDDSMLTFIIRYGPGQGLLQRKTSSGSLENITTGMNFTQAEIDA
GVILYTHNGQEGIRDLIKFDITDGMNPLIDRYFYITVGSIDMVFPDVVSKGVSLREGGRV
TLTTDLLSTTDLNSPDENLAFTITRAPVRGHLECTDTPGMPIVSFTQLQLAGSKIYYIHT
SDDEVKMDSFEFEVTDGYNPIFRTFRVSIVDVDNKKPVVTVNSLVVTEGQMKLITPFELT
AEDQDTTEKQLKFTITQLPVHGKVLYNQSTPVTSFTKQDLNENLISYKHDGTESSEDSFS
FTVTDGTHTDFYVFPDTVFETRHPQTMKITIVGIDNGVPQIVVNKGAPTLKILTTGHLGF
PITTKVLRVEDRDSIPASLVYHITTEPRHGYIVNLGKGNDSISMFSQADIDDLNVCYVLR
NDENATSDVFHFSVEDRGGNKLKDQQFRLDWAWISLEKEYYVVDEEDKFLEVVLRRRGYL
GETSFIGIGTEDGTAKKEEDFKGRSQRQVQFNPGQTTATWRVRILTDGKYEQAETFQILL
SEPVMGVMEFPATATVEILDPSDESTVFFPEQIHSVEEDVGELFIPVHRSGDISQELMVV
CYTQHGSASGTIPTTVLSYSDYISRPEEHSSILRFDTGEREKQCRVMIIDDSLYEGEESF
NVTLSLPVGGRLGMHYPTTKVNILEDIDDAPVFYFGEAEYRVDESDGYVEVKVWRTGTDL
SKTGTITVRSRKAEPVSAEAGIDYVGISRNLDFAPGVSMQTFRVTILDDLGQPELEGTES
FELVLRMPVDGVLGEPGKATVFINDSISDLPKVQFREPVYTGEESDGQITATVYRSGDIR
HKSTIRCYTRQGSAEVASDFDERPNTDSSIITFLPGEAEKPCILSLVDDTLYEEGEELRL
VLGYPKSDSQFGASVGALNETLVKIKDTADKPIIRFLGTKFSVSEPKESGAVAIVSIPVV
RVGDTSKVSVVRVHTKDGSAISGEDYNPVSQDIEFKQGDKEHVVEVEVLFDGVREMREAF
TLHLKPDENMVAETQVTKVIVYIEETNSMADVTFPSLPHVVSLLHYDDVARTPENLQPPA
GYPVVCVTACNTKYPDYDKTGSICVSEHINNTLTRYRWLISAPAGPDGVTSPMREVDFDT
FFTSSKMITLDSVYFQAGSRVQCAARAVNSNGDEGLELSSPIVTINKEEGMCQPRKMGTV
GAEPFSAKLRYTGADDPKHPNLIKVTVTMPHIDGMLPVISTRPLMNFELTLSPDGTRVGN
HRCSNLLDYQEVTTGHGFITASTRNPESMGDMAPYQFSSPLRGNSTLRFYRNLNLEACLW
EFTSYYHMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGTGGWQHFDLQ
SELRLTFVYDTAILWKDGIGSPPQAELQGALYPTSMRINEQGRLVVNFRTKARFRGLFVE
SHSGGRIKRAATSMSSMVMSVDHPGLTFNLTLVRSEPTYNQPVQQWTFTSDFAVRDYSGT
YTVKLIPCTTAQNMEYTLPPVCSPREPITFDLDIRFQQVSDPVAVEFSLNTQMFLLSKRS
LWLSDGSMGFGQESDVAFSEGDTVYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKY
NPTKFEFGCLADSPSLLYRFKIIDKAQPETQAHAFGDVGFKALLAVDDPSALSLVRQPGS
DGFSLDSRAMFQVAAGREWYIHTIYTVRSKENANRGIGKRSLEYHSLVTTSNDLALSPSG
GKAHRSRRSAPDEIPEVAEDIGADNNRGTNIMHIALDRGKRRAGGSNELLTDGLEPSELN
AVEEEEGLVTVVGALVGLLLTVLIIVTIILVLRSRQKDGKVGWREGVQEVVKGSVSTEPM
LVVRMQDCHNSSEV
NT seq
9405 nt
NT seq
+upstream
nt +downstream
nt
atgttttttttaatcacgtccgtttccaagatgttccacagacttctcctgtgcttttca
ctaacaggtcttgttttcgcgcagcctgacagcactggattattttacgcactcagatcc
gaactgtcagaagatgcaatcttggtggccaacaacggaatacgcgtgcctttcgggaga
tcggtcttcatcgatcccatcaatgatttggtgattcagacgcagccgggagaccgatgc
agcatcacagtcctggataatgacccgctctcacagagaccggggcacctctctcccaaa
aagtttccgtgtgatttcggtcccaacgatgtgacatactcccactacgggtccagaagc
ccggctaaagatagagtgaggctgcagctcaggtatgacgcgcaaaccgaaaccgttatc
atcccgtttatgatggaggttgaagtagtttttacgcagctagagttactcaccaaaaac
atgccactcactgtcgataatctgaaagggaccagtaaccctatcgataagaagatttta
gagtttacttatgacagagactctcataaatgtgaggtgacagccctgtccagcggcagc
gcgctgcctagatacggaagactccttgatggggggaaactttccaaaatgatggactgt
gatgaattcacgcaggctgacatccgctatgagcacacgtttgagcgcaagtctcccaac
agggactatgttcccatggtggtggagctgcatgataaggaaggcaacctggtgaaacag
gagtatttccatcttatgattcgcattaaagagggggaagaaaacactccccccaaacca
agctttgtgtccatgatgatgatggagatcagccagtttgtcatgactgctctcacccct
gatatgctcgctgctgaagatgcagagtcagacccagatgagcttattttcaacatcaca
tctcccttatcatacgaggagggctacatagtcagcactgatgacagaaaccttcccatc
acgtctttctaccagagagacctgcgtgatctgaaaatagcttacaagcccccctccctg
gattctgacactgagaggattttccagcttgagtttgaggtggtagacacagacggggcc
gtctcagaccccttcgcttttatgatagtggtgaagccgatgaactctttggcccctgtt
gtgacacgtaacactggtcagctactgtatgagggccagtctcggcccctcttcagcgcc
cacaacttggagatcagcgatgaagacaacctggacagtgtcaccatcacagtggtggat
gggttgcgccacggtgacctcatggttctgggctctcataggaaattcttcacacctgct
gaccttacaacaggggttgttgtgtacatgcatgacggcagcgacacatacagtgacaac
attgtcttcaagatgtccgatggaaaaaatgaagtagaatttctttttcctatcactatc
gttcccactgatgacgagccgccgattataaatgccaacactggcctggtgctgttcaaa
aaccagatgatgccgatatctcccctcatgctcagcgctgccgacattgactctgaggac
tcaactattaaattcaccattgtacctcccttttctaatattggcacagtgttcctgagg
cagtctgatgccccagaggacccctcctcctggaagtttaacgccgaggatgaagtgtat
gaaaaggaagtgacagagtggcttcaaaaagatatcactgatgggaagctgttttacaag
cacacagggcctcacaacacagagaccatcatggatcagtttgtgttcacggctcaggat
gacaatgatcctcctaatgagtcaggagagaacgtatttataatccgggttttacccata
gatgacgtacctcccgagctgttccctggcaccaccctgcagctgactgttcaggagtac
aagctcactcaatttagcaaagaagttctgcgctacactgatttggactctgaggaccgt
gacctcaaatacacagtcatccagcctccgacagatacagatgaaaataacccagttgtg
ttcggttctttggttctgacagacagcccagacaccgaagtcactgagttcacacaggct
cagattaaccatcataagatctcctacggccccccggatgttgaactcggcattacagcc
cacgttgtgcagtttcggtacactgttgaagacacagctgggaacagtgttgaaggggct
ttcactatctacctccagcctgtcaacaacaaacccccacagattacaaacactggcttc
actgtgttagaacgtggcatgcacatcatcagtatcgccgagctagacaccacagacgtg
gacacagccagtgaacagattacctttactctaagccagctccctaaacacggccagctt
caggttgcattaactgacctagagaaaaaaggggttttcagacttgaggagatctcagag
gggaagatatcatacattcacgacggggaggagacggtgagtgatgagtttcagttggat
gtcagtgatgggattcatgttgtaagcgtgacggtcaaagttaatgtaaagcccgtcgat
gatgaaactccgactgtcagcctgcctgcgggaacaatcggctctcatatggatgtgctg
gaaaacggagccacagaaatcacaactaatgtcattcaaggccatgatgatgacacagat
gacctccagctaacctttatcgtggaagatcctcctgctatgggtgaaatattggttaaa
ggagtgcctgcaactaggtttacccaggctgatatcattaatggtgtggttgtgtatgca
cacacgggtggggagataggtctcccctctcagcaggacggtttcaatttgactctcaca
gacatgtccgatgattggacagtaggtggcaataaggtcaacggagtgcatgttcgagtt
accatccttcctgttgacagccaggcccctgaggtcggagtcgggattcaattcagtgtc
attgaaggggagaaatacgccatcggtccacagcacttgaacgctgatgataatgacacc
ccaacggatgatatcctttgcactatcatcgtccagcccactgctggctatgtggaaaat
atatcacccgccccaggctcagaaaagtccagatcaggaacagctatcagtgcttttacc
atcagagacatcagggaggggaatatctactatgtgcagagcattcacaaaggagtagag
ccagtggaggacaggttcacatttaggtgttctgatggcatcaatttctctgagaaccat
ttcttcccaattgttatcattccagcaaatgacgaaaagccagagatttatttgagggag
atagtcgtgatggaggggatgaacattgtcatcgacactccgattctgaacggagacgat
gccgatatcccacctgaggagctgatgttcatcatttccaaacctcccaaacacggtgcc
attttaaaccagctatccacaggctcagttttggtgactaatttcactttagagcagatt
agagaagcatcaagtattatttatgagcacgatgactcagagacaacagaggacagcttt
gatgtcactctgactgatggaaagtactctgtgcagaaaacagccatggttttgatcatt
tctgttgacgacgagacccccagaatgctaatcaatgatgggttggaggtggaaattgga
gagaccaaagagataaacaacaaagtgcttaaagcaacagatttagattcagacgacagc
atgctcacatttatcatccggtacgggcctggtcaaggtcttctgcagagaaaaacctca
tccgggtctctggagaatatcacgacaggcatgaatttcacacaagctgaaatcgatgcc
ggtgttatactttacacgcacaacggtcaggagggcatccgagatttgatcaaatttgac
atcacagatggaatgaacccgctaattgatcgttacttctacatcaccgtgggcagtatt
gacatggtgttccctgatgtggtcagtaaaggcgtgtctctgagggaaggtggcagagtg
actttgaccacagatcttctcagcaccactgacctcaacagccctgatgagaacttagcc
ttcaccataacaagggcccctgtcagaggccacttagagtgcacagatactcccgggatg
cccattgtgtctttcactcagcttcagctggctggcagcaagatttactacatccacacc
tcagatgatgaagtcaaaatggacagttttgagtttgaagtcactgacggctacaatcct
atattcagaacattcagagtctccatcgtagatgttgataataagaaacctgttgttact
gtaaatagtttagttgtcacagaagggcagatgaaactgattacaccatttgagcttacc
gccgaggaccaggataccactgagaagcagctgaaattcaccattacccagctgcctgtt
catggcaaagtcctctacaaccagtcaacgcccgtcaccagcttcaccaaacaagacctc
aatgaaaacctcatcagctacaaacacgacggaaccgaatcctcagaggactccttctcc
tttactgtcactgacggcacacacactgacttttacgtttttcccgacaccgtgttcgag
acccgtcaccctcaaaccatgaagatcaccatcgtggggatcgacaacggcgtcccccag
attgtggtgaataaaggcgccccaactttgaagattttgaccacaggtcacctggggttc
cccatcaccaccaaagtgctgagggtggaggacagagacagcatcccggcctccctggtg
taccacatcaccaccgagcccagacatggttacatcgtcaacctggggaaaggaaatgac
tccatcagcatgtttagtcaagctgatattgatgacctgaatgtctgctacgtgctacgg
aatgatgaaaacgctacttctgatgtcttccacttctccgttgaggatagaggtgggaac
aaactcaaggatcagcagttccgtctagactgggcctggatctctctggagaaagaatac
tacgtggtggacgaggaggacaagttcctggaggtggtactgaggcggagaggctacctg
ggggagacgtctttcattggtattggcacagaggatggtactgcaaagaaggaggaggat
ttcaagggtaggtcccagaggcaggttcagttcaaccccgggcagaccacagccacgtgg
cgggttcggatactgactgatgggaagtatgagcaggcggagaccttccagattttgctg
tcggagccagtgatgggcgtaatggagttccctgccacagcaacagttgagatcctggat
ccgagtgacgagtcaacggtgttcttccccgaacagatccactcggtagaggaagacgtg
ggagagcttttcatcccggtgcaccgcagtggagacatcagccaggagctcatggtggtc
tgctacacacagcatggttcggcctcagggacgattcccactaccgtcctgtcttactca
gactacatctcccgcccggaggagcacagcagcatccttcgcttcgacacaggtgaaagg
gaaaagcagtgccgcgtaatgatcatcgatgactctctgtacgagggagaagagagcttc
aacgtcactctgtcactgcctgttggaggacgtctgggaatgcactaccccaccaccaaa
gtcaacatcttggaagatatagacgacgcaccagtgttttactttggagaggcagagtat
cgcgtggatgagagtgatggatatgtggaggttaaagtgtggaggacaggaaccgatctg
tccaagactggcaccatcaccgtccgctcccgcaaggctgagcctgtctctgcggaagct
ggtattgactatgtgggcatcagtcggaacctggacttcgccccgggcgtcagcatgcag
acattcagggtcaccattcttgatgacctgggacagccagagctggaggggacagagagc
tttgagcttgtcctgcgtatgccagtggacggcgttctgggagaacctgggaaggctaca
gtcttcattaatgactcgatatctgacttgccaaaggttcaattccgcgagccggtgtac
actggagaggagagtgacggtcagatcacagcaacagtgtaccgcagcggcgacatcagg
cacaaatccaccatccgctgttacacccgtcagggctccgcagaggtcgcctctgacttt
gatgagcgacccaacacggattcatctatcatcactttcctgccaggtgaggcggagaag
ccgtgtattctgtcacttgttgatgacacgctgtacgaggaaggagaagagcttcggttg
gttttaggctacccgaagagcgactcacagtttggagcatcagttggagctctgaatgag
accctggtgaaaatcaaggacacggctgacaaacccatcatccgttttcttggaaccaag
ttcagtgttagtgaaccgaaggaatctggtgccgtggcaattgtgagcatccctgtggta
cgagtgggcgacacgtccaaggtgtcagtggtccgtgttcacaccaaggatgggtcggct
atctcaggagaggactacaaccccgtctctcaagacatcgagttcaaacagggcgataag
gaacatgtggtggaggtggaggtgctgtttgatggagtcagagagatgagggaagccttc
actctccacctgaagcccgatgagaacatggtggctgaaactcaggtaacaaaagtgata
gtttacatcgaggagaccaacagcatggccgatgtcactttcccctccttgcctcacgtg
gtgtcactgctccactacgacgacgtcgcaaggacaccggaaaacctccaaccaccggct
ggctaccccgtcgtctgtgtcacagcttgcaacacaaaatacccagactatgacaagaca
ggctctatctgtgtcagcgagcacatcaacaacaccttgacccgctaccgctggctcatc
agtgctccagctggccccgatggcgtcaccagtcccatgagggaggtggactttgacacc
ttctttacatcctccaagatgatcacattggactcagtctacttccaggcaggctccagg
gtccagtgtgctgcaagggccgtgaattctaacggggatgagggtttagagctcagcagc
cccattgtcactatcaacaaggaggaaggtatgtgtcaaccacggaagatggggactgtt
ggcgccgagcctttctctgccaagctacgctacactggagcagacgacccgaaacacccc
aacctcatcaaagtgactgtcaccatgcctcacatagatggtatgcttccagtaatctcc
acccgccctctcatgaactttgagctgactctcagcccagacggaacccgggtcggaaac
caccgctgctccaacctactcgactaccaggaggtcaccaccggtcacggcttcatcacc
gcctccacacgcaaccccgaaagcatgggagacatggcgccctatcaattcagcagccct
ctgcgggggaacagcacattgcgcttctacaggaacctgaacctggaggcatgtctttgg
gagttcaccagctattaccacatgtctgagctgctcaccgactgcggaggcaccataggg
actgatggacaggtgctgaacctggtccagtcctatgtgaccctgcgtgtgcctctttat
gtgtcgtatgtgttccactcccccgtgggaactggtggctggcagcacttcgacctgcag
tcagagttgcgcctcactttcgtgtacgacacggccattctctggaaggatggcatcggc
agccccccacaggctgagctacagggtgcgttgtatccaactagcatgcgcatcaatgag
cagggacgtttggtggttaacttccgtaccaaggctcgtttcagggggctgtttgtggag
tctcattctggaggcagaataaaaagagctgcaacctccatgtcatccatggtgatgagc
gtggaccaccctggcctgaccttcaacctcaccttagtgaggagtgagcccacctacaac
cagccagtccagcagtggaccttcacctctgattttgctgtgagagactactctgggact
tacacagtgaagctgatcccctgtacaacagcccagaatatggaatacactcttccacct
gtctgcagtcccagagaaccaatcaccttcgatctagacatcagattccagcaagtcagt
gacccagttgcagtggagttcagtctgaacactcagatgttcttgctgtccaagaggagc
ttatggctctctgatggctccatgggcttcggtcaggagagtgatgtagccttttcagag
ggtgatacagtttatggccgtgtgatggtggatcctgtgcagaacttgggagactctttc
tattgtagcattgaaaaggtgttcctctgcactggtgccgatggctatgtaccaaagtat
aaccccaccaagtttgaatttggctgcctggccgactccccgtcgttgctgtatagattc
aagattattgacaaggcacagccagaaactcaggcacacgcgtttggtgatgtcggtttt
aaagcattgctggctgtggatgatccatcagccctgtccctcgtcagacagccggggtct
gacggctttagtttggactctagagccatgttccaggttgctgcaggccgtgagtggtac
attcacaccatttacacagtccgctccaaagagaatgcaaacagaggcattggaaagcgc
agcctagagtaccactccttggttaccacaagcaacgacctcgccctgagcccatcgggt
ggcaaagctcatcgctctaggaggtctgcacccgatgaaatcccagaggttgctgaggat
atcggagcagacaacaaccgtggcaccaatataatgcacattgctctggaccgtggcaag
cgtcgggcaggggggtcgaatgagttgttaaccgacgggctggaacctagtgagctgaac
gcagtggaggaagaggagggtctggtgactgttgtgggggcactggtggggctgctgctg
actgttctcattatcgtcaccatcattctggtgctgagatctagacagaaggatgggaag
gtgggatggagggagggggtgcaggaggtggtgaaagggtctgtcagcacagagcccatg
ttggtggtgaggatgcaagactgccacaacagctcagaggtctga
DBGET
integrated database retrieval system
