Larimichthys crocea (large yellow croaker): 104925193
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Entry
104925193 CDS
T04659
Symbol
gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104925193 (gigyf1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104925193 (gigyf1)
Surveillance factors
Other surveillance factors
104925193 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
104925193
NCBI-ProteinID:
XP_010737061
UniProt:
A0A0F8ASI0
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Position
XIV:complement(11940031..11959999)
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AA seq
1094 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGVVRGRG
ATRGGRGRGRGEGGFYQRSIEEAEVGFGRSVREIHRSQSWDDRGERRFEKPLRREVGRPG
FEESAGPGGPGRKEYTRADSDNWRTLREEHDEEEGEPGSSWRLTGSRRDDGGPRSAGWRD
HVGPGENRRRKFDFDFRDAEGHGGGRRRAGSDGLEDDRDGLPEWCTDEEDGEMGTFDSSG
AFMPMKKGGKETILEEELEFKGIEEEEEEECLADIERNSAEGDKDRESKEVGSAVGDDET
KPASPSASPPLHCTPPFLEPRPSNAGPLVDNPQLNNSHPVKASSTSSEDMAPVGGSKTQL
SPSVASSSSLPPPPPSSAAPLLPPSGGDTEDDEGMKHLQQEAEKMVASLQDTSLEEECFT
QALQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLLVK
RGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQPPPTQRPQPNRGPAGTVSQSSANVE
DGEGRMQRRGKIDRQVTGNLDQERLKKQQELAAAAALYQQLQQQQLFQLINRCSEQSMMP
SMNRSMSVPDTGSMWDMHTSASQPSGGEASLWDITMNPSTQGPTLEQLQKLQQERRDAEL
RAKREEEEQRKRREEKRRQQEEQKRREEEELFRRKQCRQQQELIMKLLQQAPQQQGPGAG
GSGWSGAPSSGLTKPGKPPALALLEMQQEAERLLKQQQQQRAQQQRDRHSGLSMGSSSMG
GQWVDGVGMWGGPGGMEGKGGSGSSSGSMGMWDEAVKNQSGLRGNSNNNMGLKNSRSSPS
LSDQYMMRRKRTEEEEKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIVA
YLKEVESPYAVLDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNMN
FPLQDSMRGMNPSTLQSMFQANHMGKAGLYDNQGGKMKKKQPMMLHSDPSILGYSFHNAG
DCMGLNEMEMVEDY
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccactggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggcggtgctg
aggctcatgggaaaaggggtgggtggagccgccccagctggagtggtccgaggacgaggg
gccacacgaggcggccgaggacgaggtcgtggtgaaggtggattctaccaaagaagtatt
gaagaagcggaggtgggttttggccgcagcgtccgagaaatccaccgcagccagagctgg
gatgaccggggtgagcgtcgtttcgaaaagccgctgaggcgggaggttgggcgtcctggc
tttgaagaatcggcaggtcccgggggtccagggaggaaggagtacacaagggctgacagc
gataactggcgcaccctccgggaggagcacgacgaggaagagggggagccaggcagcagc
tggagacttactggatcccgcagggatgatggtggtcctcgctcagcaggctggcgggac
catgttggtccaggtgagaatcgccggaggaagtttgatttcgacttccgggacgccgag
ggtcacggtggtggccgccggcgtgcaggcagtgatggactagaggatgacagagacggc
ctgcccgagtggtgtacggacgaggaggacggggagatgggcacttttgactcctctgga
gctttcatgcctatgaagaagggtggcaaggagacaatcctggaagaggagttagagttt
aaggggatagaagaggaggaagaagaggagtgcctcgctgacatagagaggaacagtgct
gaaggagacaaagacagggagagtaaagaagttggctctgctgtaggggatgatgagacg
aagccagcatcaccctccgcctctcctccactccactgtactcctccgttcctggagcct
cgacccagcaatgctggcccattggtggacaaccctcagctgaataacagccaccccgtc
aaggccagcagcacatccagtgaagacatggctccggtagggggctccaagacccagctg
agccccagcgttgcctcctcctccagtctgcctcctccacccccttcctccgctgcccct
ctcctccctccatctggaggagacacagaggacgacgagggcatgaagcacctgcagcag
gaggcagagaagatggttgcatcactgcaggacacttctttggaggaggagtgttttacc
caggctctgcagcagcagcaggagagcaggaacacagcagctgctctgccactgtcacac
gaggccgccatgaagtggttctacaaggacccacagggagagatccagggcccattcacc
acagtggagatgtgcgagtggttccaggctggctacttcaccatgaccctgctggtgaag
cgtggctgcgacgagggcttccaacccctgggggacgtcatcaagatgtggggccgcgtg
cccttcgccccagggccctccccgccgcccctgctggtgagacagccaccaccaacgcag
cgcccgcagcccaaccgggggcccgccgggactgtgagtcagagctcagccaacgtagag
gatggggaagggaggatgcagaggagagggaagattgatagacaggtcacgggaaacctg
gaccaggagcgcctgaaaaagcaacaggagctggcagcagcagcagctctttatcagcag
ctccaacagcagcagctattccagctcattaacaggtgcagtgagcagagtatgatgcct
tcgatgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctca
gcttcacagccgtcaggcggtgaagccagtctttgggacataacaatgaatccttctact
cagggtccaactctcgaacagcttcaaaagctccagcaggagaggcgagacgctgaactc
agggcgaagcgtgaggaggaggagcagcgtaagaggagggaggagaagaggaggcaacag
gaggagcagaagaggagggaggaggaggagctcttcagacgcaagcagtgtcgtcagcag
caggaactgattatgaagctgctgcagcaggccccccagcagcagggtcctggggcaggt
ggctcaggctggagcggggctccctcctctgggctcaccaagccaggaaagcccccggct
ctggctctgctggaaatgcagcaggaggcagagaggctcctgaagcagcagcagcaacag
agagcccagcagcagagagaccgccactccggcttgtcgatggggagctcctccatggga
gggcagtgggtggatggtgttggcatgtggggcgggcctggaggtatggagggtaagggt
ggcagcggaagctcttcaggcagcatgggcatgtgggacgaggctgtgaagaaccagtcc
ggcctgcgtggcaacagcaacaacaacatgggcttgaagaacagccgcagcagtccttca
ctcagtgatcagtacatgatgcgtcgtaagcggacggaagaggaggagaagctgctgaag
ctgctgcagggcatgaagcctcaggacggcttcaccacctggtgtgaacagatgctgcac
gctctcaacacctctgccaacaactcctcctcctctctggatgttgccacgattgtggca
tacttgaaggaggtggagtctccctatgcagtgctggacttcatccggtcctacctaggg
gacacagtggaagccaaagagttcgccaaacagtttctggagcgacgtgccaaacagaaa
gccaaccaacagagacagcagcagcagttatcaaaggaagtggctggattgaacatgaac
ttccctctgcaggactcaatgcgaggtatgaatccaagcaccctgcagtctatgtttcaa
gccaaccacatgggcaaggctggtctctatgacaaccaaggggggaagatgaagaagaaa
cagcccatgatgctgcactctgaccccagcatcttagggtactcattccacaatgcgggc
gactgtatgggcctgaatgagatggagatggtggaggattactga
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