Larimichthys crocea (large yellow croaker): 104925276
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Entry
104925276 CDS
T04659
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104925276 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104925276 (fanci)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
104925276 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
104925276
NCBI-ProteinID:
XP_010737170
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Position
XXI:complement(7700058..7709379)
Genome browser
AA seq
1327 aa
AA seq
DB search
MKTEMDQIVKLSDEDSTAELQKYLSSITDDRLITVITNGALKAKKVGTLIKGILKGSPCN
TTEGSNRRLLVYQHCIPLCESGDLKTEVAADIIGLLMLETHALSGPSLAQLASLFVEAIK
VGKMGSGKSLELFPTVLTALSACESLSYGKGELSGEEYKKQLINSLCSSRWDPQCVIHLT
TMFRDVPLSSEELRFVVEKVLRMFTKLDLQEIPPLVYQLLLLSAKGCKKQVLDGIISYFK
EQDISQEEEQKHSDSLDLEVQSIPQDQLRHVEGTAILHIVFAIRLDHELGREFLKSFKTS
YGDLCPFSVALLLSVARIQRYEEQVFDLLKGAIIKSFKDEQLQQGSKFLQDLLPGHCSVA
QMILDTVRNSVFGWDHVTQGLVQLGFFLMDTFGPKPGPFGKTTEGSTTIARTPAQQTCKL
GGQVLLQGFKMHEPIRGEILEQVLNRLVTKIASPVSHYLDLFSDIVVSAPMILLESSSKV
TETFDHLSNLPLATVQGLLKAVQPLLKVSMSLKDALILVLRKAMFSSQLDGRKSAVTGFL
LLLKNFKVLGSVASSQCSQAISSSQIQVDVHSRYNSAANEAFCLEILSSLRRCLGQQADV
RLMLYEGFYDVLRRNSQLASSIMQTLFSQLRRYYEPEQDLLPPVKLEPCITAHGDQVYLQ
EPLAHLVTCTVHCLLWLQNMHRSAKSNADDSDDDDEEEEEGYQSELQTILESMTRRMIKS
ELEDFELDKSAEFSMGSSVGVKNNIYAVLVMGVYEVLMEYNFIKANYSKSRFEELMELFN
RYHKLSEILKEKSGKGKVSTHKTPRSLLSLGFVSTLLTVLFRDSTQSREEALSVLRSNGE
FVRYTVSVAVQKIQQLEETGHTDGPDGQNTDRTFRFLCDMTSVLMWRYTNIPSAVEDAGK
KEKRSSLSHLCLEGLLRIFTTCQQRYPDRMTQLLSTMEVSEDDAEPDDDTEMNFFYIRQF
QRALFTQLSGGEDEFNSKEAQLLVSILSVLSRQLKPSSKQFVQMITWTVKICKETSFEDS
AFSKGLLSLLFNLHILYKSPVGLLLELSQDIHSQLGDIDQDVEVEKQSHFAIVNMKTATT
AALLVLSQVDRVLDEVDWLIARKKSQTATDKSGSGEPTQTAGQQDPIEKAVTLQLGTLLT
ALNELIQTALLPGTCTITLLRELTRTYSILTTLVKYYIQVCASQHGALPARFEKLVKLSG
SHLTPQCYSFITYAQSGEFSGGGADDKKKKKRKDEVNTAASAKLLRETKAIPNLIFSIEQ
YEKYLITLSKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQDDSQETPESQAVEETQEP
KQKKRKQ
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgaaatggatcaaatcgtcaagctgtcagatgaagacagcaccgctgaactc
cagaagtacctgtcctccattacagatgaccggctaataactgtgattaccaatggcgca
ctgaaggctaagaaggtggggacattgattaaaggcatactgaaaggctctccatgtaat
accacagaaggatcaaaccgcagacttcttgtttatcaacactgcatccctctgtgtgag
tccggggatcttaagactgaggtggcagctgatatcattggactactgatgctggagact
catgcactgtccggaccctctcttgcacaactggcgtccctttttgttgaagccattaag
gtgggaaaaatgggcagtgggaaatcgctggagctgtttcctactgtgcttactgctctg
tcagcctgtgaatccttatcttatggcaaaggcgaactcagtggcgaggaatacaagaaa
cagctgatcaacagcctctgctcaagcagatgggatccacaatgtgttatccacctgaca
actatgttcagggacgtgcccttgtcatcagaggagctgcggtttgtggtggagaaagta
ctgaggatgttcaccaaactggatctgcaggagattccaccgctggtttatcagctgctg
cttttatctgcaaagggttgtaagaaacaggtcctggatggaatcattagttattttaag
gagcaagacatatcccaggaagaagaacagaaacacagcgatagcctggatttagaggtt
cagtccatcccacaggaccagttaaggcatgtagagggcactgctatcctccacatagtc
tttgctatacgacttgaccatgaacttgggagagaattccttaaaagctttaagacatct
tatggggacctgtgtcccttcagtgtagccctgttgctctcagtggcacgcatccagcgt
tatgaggagcaggtgtttgatcttttgaagggggcaatcatcaagagcttcaaggacgag
cagctgcagcaggggtcaaagttcctgcaggacctcctgcctggacactgcagtgtggct
cagatgatactggacacagtcaggaacagtgtgtttggttgggatcatgtgacacaagga
ctggtgcagctaggcttcttccttatggacacatttggacccaaacctggaccatttggc
aagaccacagaagggtccactaccatagcccggacccctgctcagcagacatgtaagctt
ggaggacaggtgctcttgcagggctttaagatgcacgagcctatcagaggcgagatactg
gagcaggtgttgaatcgattggtcacaaagatagcctcacctgtcagtcattacttagac
cttttctctgacattgtggtctctgctcccatgatcctcctggagtcatcctctaaggtg
acagagacgtttgaccacctgtcaaacctgcctttagccacggttcagggtctactaaaa
gctgtccagcccctgctcaaagtcagcatgtccttgaaagatgctttgattctagttctc
cgtaaggccatgttttccagccaactggacggcaggaagtccgcagtgactggcttcttg
ttgctgctgaagaacttcaaagttttgggcagcgtggcgtcgagtcagtgtagccaagcg
atctcctctagccagatccaagtggatgttcattctcgttacaactctgctgccaatgaa
gcgttttgtctggagattctcagcagcctgcgtcgctgccttggccagcaggccgatgtg
cggctcatgctatatgagggtttctatgatgttctccgtcgcaactctcagcttgcaagc
tccatcatgcagaccctcttctcacagctgaggcggtactacgagcctgagcaagacctt
ctgccaccagtgaaactggaaccgtgcatcacagctcacggagaccaagtctacctccag
gagccactggcccatttggtgacctgtactgtacattgcctgttgtggctgcagaacatg
catcgatcagccaaatccaatgctgatgatagtgatgatgacgatgaggaggaggaggag
ggatatcagtctgaactacagacaatcctggaaagcatgacaagacgcatgatcaagagt
gaactggaggactttgaactggacaagtcagctgagttctcaatgggatccagtgtcgga
gtgaagaacaatatctatgctgtgctggtgatgggagtgtatgaagtcctgatggagtac
aatttcatcaaagccaactacagtaaaagccgcttcgaggagctcatggagctgttcaac
cgctaccacaagctctctgagatcctgaaggagaaatccggaaagggcaaagtgtccaca
cacaagaccccccgtagtttactctctttgggcttcgtatcaactctacttacagtgctc
ttcagagacagtactcagagcagagaggaggccctctcagtgcttcgctcaaatggagag
tttgtgcgttacacagttagtgtagctgtacagaagatccagcagctcgaggaaaccgga
cacacagatggcccagacggacagaacacagacagaactttccgcttcctctgtgacatg
acaagtgtgctgatgtggcgttacaccaacatcccgagcgctgtggaggacgcaggaaag
aaggagaagcgttccagcctctcccacttgtgtctggaaggtctgctcaggatcttcaca
acctgccagcaacgatatccagacaggatgacccagctcctctccaccatggaagtctca
gaagacgatgctgaaccagatgatgatacagagatgaacttcttttacatccgacagttt
cagagggcactgttcacacagttaagtggaggagaggatgaatttaacagcaaagaggct
cagctgctcgtcagcatcttgagtgtgctctcccgccagctaaagccatcctcaaagcag
tttgttcagatgatcacatggactgtgaaaatatgcaaggagaccagttttgaggattcg
gctttctccaaaggtctgctctctcttctcttcaacctgcacattctctataagagtcct
gttggcctgttgctcgaactcagccaagacatccacagccaactgggagatatcgatcag
gatgtggaggtggaaaaacagtctcactttgccatcgtcaacatgaagactgcaaccaca
gcagcactgttggtcctgtctcaggttgacagagtgcttgatgaagtggactggctgatc
gccagaaagaaaagccagacggccactgacaaatcgggctctggtgagcccacccagact
gcaggccagcaggatccgatagagaaagcggtgacgctgcagctcgggacgcttttgacg
gcactgaatgagctcatccagacggccctgctgcctggaacctgtaccattacactgctg
agggaactgactcgcacatacagcatcctcaccaccctggtcaaatattacatccaggtg
tgtgcaagccagcacggtgcactgcccgcacgctttgagaagctggtcaaactgtctggc
tcccatctcacacctcagtgctactctttcatcacatacgcacagagtggagaattcagc
ggtggaggtgcagatgacaagaagaaaaagaaaaggaaggatgaagtcaacaccgctgcc
tctgcaaaacttctgcgtgagacaaaggccatcccgaacttgatcttcagcatcgagcaa
tatgagaagtacctcatcacgctctcaaagaaatcaaaggtaaatctgatgcagtacatg
aagctgagcacctcaagagattttcgcatcaacgctgctactctggacgcagccctacag
gagcaggacgacagtcaggagactcctgagtcacaggccgtagaggagacacaagaaccc
aaacagaagaagagaaagcagtga
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