Larimichthys crocea (large yellow croaker): 104925297
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Entry
104925297 CDS
T04659
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104925297 (myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104925297 (myom1)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
104925297 (myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
V-set
Ig_J_second
C2-set_3
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
104925297
NCBI-ProteinID:
XP_019127198
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Position
XXIII:7597411..7620502
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AA seq
1486 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRSKETESKLSQYQSSSRYTAGSSTSTTSRSRGLKVSSHSGL
EASRLSPVPKRAKPTYLAVDRENQIIGYVVPIFRGSEEFATGYSGTEEARVRDTAAYMAR
RDLFTSGLEMERSELISRREAMRESAERISLNKRIHEHEEHFKRMNEDSLMHPPEFVIKP
RSHTVWEKQCVRLHCTVTGWPDPRVVWYKNNVTIDPLANPGKYKLESKYSVHSLEINRCD
FDDTAQYRVSAMNSKGELSAFASIVVKRFKGEVDEYLPAPRQGPVSEYGINFKTHIVDKF
GVSFGKEGETMSLGCTVVIYPALHRYQPEVQWYRDGMLLSPSKWHHMHWSGDRATLTLTH
LNKEDEGLYTLRVTTKSGYETYSSYVFVRDADAELEGAPGAPLDVRCLDANKDYIIVTWK
QPAVDGGNSILGYFVDRCEIGTNHWIQCNDTPVKFARFPVTGLVEGRSYTFRVRAVNKSG
MSRPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGIVPGRPLELQVTEATKN
YVVLSWKPPGEKGLEGVMYYVEKCVLGTDSWQRVNTEIPVKSPRFALFDLAEGKSYSFRV
RCCNSAGVGEPSEATEATTVGDKLDIPSAPGKVVPTRNTDTSVVVSWEASKDAKELVGYY
IEGSIVGSSVWEPCNNKPVNASRFICHGLITGETYVFRVRAVNAAGLSQFSQESEPVEVK
AAIASPAPPYGITVLECVRDAMVLGWKQPNFVGGADIIGYFVDYREVIDGVPGNWHEANI
RAVSDRAYRVSDLKENKKYQFQVRAANIAGVGIPSLPSDTFLCEEWTIAVPGPPHDLQIR
EVRSDSLVLLWKPPIYQGRDPVNGFYIDIKEAEAPEEAWRGVNTKATEKLYYKIKNLKEG
ETYLFRVRAQNKAGVGKTSDVTEPVPAVTKPGTKEIVVDVNDDGIVSLNFECCDMTPDSK
FVWSKSYEEITESSRMTLETKGNKSKAVFSALGEEDIGLYSCFVTHTDGASASYNLSAEE
LQRLLVISHDHKFPIIPLKSELAVEMQEKGRVRFWLQAEKMSANGKVDYVFNDNLLSQGE
KYKMNFDKNTGVIEMFMDSLTPADEGTFTFQLQDGKATNQSSLVLIGDVFKELQKDSEFQ
RKEWFRKQGPHFIEYLSYEVTPECCVVLKCKVGNMKKETSALWYKDGREIKADEHLGFSE
GVLKLEIAQRDSCADTADYVDSLIWRRLKISKKDSGVYKVILKDDRGTDTSTLNLTDQGF
KDLMNEVFSYIANSSTPLKITSTEHGIRLYTFVSYYNDLLQVTWHYKDSAIAFSDRIKSG
VVGEQLWLQITEPTEKDMGKYAIEFNDGKGGLRRTVELSGQAFDDAFAEFQRLKAAAVAE
RNRARVAGGLPDVVTIQEGKALNLTCNISGDPLPEVTWLKNDKEITSNDHCILKFASGKF
ASFTITAVDTVDSGKYSILVKNKYGTESADFTVSVFIPDEAGGKKK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatctataccgttctaccagaagcaccatcgccactatgaccgtggctaccgc
agcaaggagacagagtctaaactgagccagtaccagtccagcagcagatatactgctggt
agcagcacgtccaccaccagcaggagcaggggacttaaagtgtcttcacattctgggctg
gaggcgagcagactgagccctgtaccaaagagagccaagccaacttacttggctgtggat
agagagaaccaaatcatcggctatgtagtgcctatcttcaggggcagtgaagagtttgct
acaggatattcgggtacagaggaagcaagggtgagagacactgctgcatacatggctcgc
agggatttgttcaccagtgggctggagatggagaggtcagagctgatctccaggagggag
gccatgcgcgagtcggccgaacgcatctctctgaacaaaaggatccatgaacacgaggaa
cactttaagcgtatgaacgaagatagcctgatgcaccccccggagtttgtgattaaacca
cgctcccacaccgtgtgggagaaacagtgcgtgcggctgcattgcactgtcactggctgg
ccggacccacgggtcgtctggtacaaaaacaatgtgacaattgaccctcttgccaaccct
ggcaagtataaacttgagagcaaatacagcgtgcactcactggagattaacagatgtgat
tttgatgacacggcgcagtatcgtgtctctgccatgaactccaagggagagctgtctgca
tttgcctccatcgtcgtcaagaggttcaaaggtgaagttgatgagtacctgccagcaccc
aggcagggcccagtctctgagtatggcatcaacttcaagactcacattgttgataagttc
ggtgtttcctttggaaaagagggtgagaccatgagtctgggatgcacggttgtcatttac
cctgccctgcaccgctatcagccggaggtccagtggtacagagatggcatgctgctgtct
ccttctaaatggcaccacatgcactggagtggagatcgagccacactgacgctcacacac
ctcaacaaggaggatgaggggctctacaccctgcgcgtcaccaccaagtctggatatgaa
acctactcatcttatgtctttgtcagagacgctgatgctgagctcgaaggagctcccggt
gcccctctggatgtccgttgtctggatgccaataaggattacattattgtcacctggaag
cagccagctgttgatggtggaaactctatcttgggctactttgtggacagatgtgagatt
ggaactaaccactggatccagtgcaacgacactcctgttaagtttgcccgtttccccgtc
actggcctggtggagggccgatcctacaccttccgtgtgcgtgccgtcaacaagagtggc
atgagccgcccgtctagagtctctgagccggtggctgccatggacccggctgatcgcgcc
cgcatgagaggtacctctgctccctggactggacaaatcattgtcacagaggaggagcct
gcagagggaatcgttcctggcagacctcttgagctgcaggtgacggaggcaaccaagaac
tatgtggtgctgagctggaagccacctggagagaaaggccttgagggtgtcatgtactat
gtggaaaagtgtgtcttgggcacagacagctggcagagggtgaacacagagatcccggtc
aagtctccgcgttttgctttgtttgatctcgccgaggggaaatcctacagcttccgcgtc
cgctgctgcaactccgccggtgttggcgaaccatctgaagcaaccgaggccaccactgtt
ggagacaagcttgatatcccatctgccccaggaaaagttgtcccaaccagaaacacagac
acatcagtcgttgtgtcttgggaagcatccaaagacgccaaagagttggtgggttactac
atcgaggggagtattgtgggcagcagtgtgtgggagccatgcaacaacaagcctgtaaat
gccagcaggttcatctgccacggtctgataacaggagagacttacgtgttcagggtgagg
gcagtgaacgcagcagggctcagccagttctcccaggagtctgagcctgtggaggtgaag
gctgctattgcctcccctgctccaccctatggcatcactgtcctggagtgcgtgcgcgac
gccatggtgctgggctggaaacagccaaacttcgtcggtggtgctgacatcataggctac
tttgtggattaccgtgaggtcatcgatggcgtgccagggaattggcatgaggcaaacatc
agggctgtcagcgacagggcctatagggtgtctgacctgaaggagaacaagaagtaccag
ttccaggtgcgtgcagccaacatagctggcgtcggcatcccgtcactgcccagtgacacc
ttcctgtgcgaggagtggaccattgccgtgccaggacctcctcatgacctgcagataaga
gaggtgcgaagcgactctctggtgctcctatggaaaccacccatttaccagggtcgtgat
ccagtcaacgggttctacatcgacatcaaggaggcagaagcaccagaggaggcgtggaga
ggagtgaacactaaagctacagagaagttatactataagattaagaatctgaaggaaggc
gagacgtatctgttccgtgtgcgtgctcagaataaagccggtgttggaaaaacctcagat
gtgacagagccggtcccagctgtgaccaaaccaggcaccaaagagatagtcgtggatgtt
aatgacgatggtatcgtctccctgaacttcgaatgctgtgacatgacccccgactccaaa
ttcgtgtggtccaagagctatgaggaaattacagagtcatcccgcatgaccttagagacc
aagggaaacaagtccaaagcagttttcagtgcccttggggaggaggacattggcctttac
tcatgttttgtcacccacaccgatggtgcttcagctagttacaatctttctgcagaagag
ttgcagaggctgctggtgatcagtcacgaccacaaatttcccattattcccctgaagtca
gagttggctgtggagatgcaggagaagggtagagttcgcttttggctgcaggcggaaaag
atgtcagcaaacggcaaagttgattacgtcttcaacgataatcttctctctcagggggag
aaatacaagatgaactttgacaagaacaccggtgtgattgagatgttcatggactcattg
acccccgcagatgagggcaccttcaccttccagttgcaggatggaaaagcaaccaaccag
tccagtttggtactgatcggagacgtgttcaaggagctgcagaaggactcagagttccag
aggaaagaatggttcagaaagcaaggtcctcactttatcgagtatttgagttatgaggtg
acaccagagtgctgcgttgtgctgaaatgcaaggttggcaacatgaagaaggaaacctca
gcgctgtggtacaaagatggacgcgagatcaaagcagacgagcacctcggcttcagcgag
ggagtgctgaaactggaaatcgctcagcgcgactcctgtgcagacacagcagactatgtc
gacagcctaatctggagaagactaaaaatttccaaaaaggactctggtgtgtataaggtt
attctgaaggatgacagaggaacggacacttccacgttgaatctgacagatcaaggtttc
aaagacttgatgaatgaagttttcagttatatcgccaattcctccactccactgaagatc
acaagcacagagcatggcatccgactctacacttttgtcagctactataacgatttactc
caagtgacatggcactacaaggattcagccatcgccttctctgaccgtataaagagtggt
gtggtgggagagcagctgtggctgcagatcacagagcccacagagaaagacatgggaaag
tatgccattgagttcaacgatggaaaaggtggcctgaggaggactgttgagctgtccggt
caagcatttgacgacgcttttgcagaattccagagactcaaagctgctgctgttgcagag
agaaatcgtgctcgagtagcaggaggcctacctgatgtggtcactatccaggagggcaag
gccctcaatctcacctgcaacatttcgggcgaccccctgccagaggtcacctggctgaag
aatgacaaggagatcacgtccaacgaccactgcatccttaagtttgcatcaggcaagttt
gccagcttcaccatcaccgccgtggacacagtggactctggcaagtacagcatcctggtg
aagaacaagtacggcacagagagcgcggacttcaccgtaagtgtcttcatccctgacgag
gctggcggcaagaaaaaataa
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