Larimichthys crocea (large yellow croaker): 104925739
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Entry
104925739 CDS
T04659
Symbol
slitrk1
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104925739 (slitrk1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
104925739
NCBI-ProteinID:
XP_010737743
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Position
XIX:3801548..3804416
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AA seq
705 aa
AA seq
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MLLWIVLLNAALCVASGNVTRDVCKEQICSCNEIEGDLHIDCEKRSFTTLQHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTLPYEGILEQIPGIAEVLLEDNPWDCNCDLVSLKEWLENIPHNALIGRVI
CEAPTRLQGGDLNETSEADLCPSENPGVDTSLVAPPTQEEISESRGPHPTPYKPNGDASG
PPTPGGHHGAKSRSKSRENWQLKTRPTPVLTGVNGDREQQQLHNVTCPQPCNCKLVGSRQ
GLGVNCEGKKIESLSSLKPKPLSAHELNMRDNNIHAVKKNQLLGYSSLNLLDLGGNNIKV
IDNSTFQNQSELRWLYMDKNYLDTLIAEMFVGLVNLEYLSLEYNDIQLIAAGAFSPMPNL
RVLFLNNNLLKSLPVDAFLGISLSKISLHNNYFPYLPVAGVLDQLNSIIQIDLHGNPWDC
SCNIVPFKQWTEKLGADVIVSDLKCESPEEFWKRDFRYVRNDLMCRKLYDKVPPTPLSKN
STFTQDSGTRPNSYLEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGN
SSASEINSLQTVCDSSYWHSGPYNADGGAHRGFDCSTHLSTTNDA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattgttctgctgaatgcggctctttgtgttgctagtggaaatgttaca
agggacgtttgtaaggagcagatatgctcttgcaacgagatcgagggtgatctgcacata
gactgcgaaaaaaggagcttcaccaccctgcagcatttgactggcccgagctcgcagttt
taccacttgctgttgcacgggaattctctatccaggctatttcccaacgagttcgccaac
ttttacaatgctgtgagcctgcatttggaaaacaatggcttgcacgacattgtccccggc
gcgtttctgggattgcagctggtgaaaaggctgcacatcaataacaataagatcagatca
ttcaggaagagtacatttctggggttagacgacttggaatatctccaagctgattttaat
ctattgagggatattgaccccgccgttttcagggacctaaataaacttgaagtgttaata
cttaacgacaacctcatcagtgcgctacctataaacgtgtttcaacatgtgcccattacg
catctcgacctgcgggggaaccgaatcaaaacgttgccttatgaggggatccttgagcag
ataccgggcattgcggaggttttattggaggacaacccgtgggactgtaactgcgacctg
gtttctcttaaggaatggctggagaacataccgcataacgcacttattgggagggtgata
tgcgaggcacccacccggctgcaagggggcgacttaaacgagacgtcagaagcggatctg
tgtccttcagagaaccccggagtggacaccagcctggtcgcccctcccacacaggaggag
atctcagaatcccgtggcccccatcccacgccttacaagcccaacggagacgccagcggg
cccccgacgcctggcggacaccacggtgccaagagtcgctccaaatctcgtgagaactgg
cagctgaaaacgaggccaactcccgtgctgacaggtgtgaacggggacagggagcagcag
cagctgcacaacgtgacgtgccctcagccgtgcaactgcaagctggtcggttccagacag
gggcttggggtcaactgcgagggcaaaaagatcgagagcctgtccagcctcaaacccaaa
cccctcagtgcgcacgagttgaacatgagagataacaacatccatgcagtgaaaaagaac
cagctgctcggctactccagcctcaacctgctagatctgggagggaacaacatcaaggtg
attgacaacagcactttccagaaccagagcgagctcaggtggctgtatatggataagaac
tatctggatactctgatagcagagatgttcgtgggcctcgtgaatctggaatatctcagt
ttggaatacaacgacatccagctgatagcggcaggtgcgttcagccccatgcccaacctg
agggttctgttcctcaacaacaacctgctgaaatctttacctgtggatgctttccttggg
atttctttgtccaaaatcagcctgcataataattacttcccctatctccccgtggctggc
gtgttagaccagctcaactcaatcatacagatcgatttgcacgggaacccgtgggattgc
tcgtgcaacatcgtgcccttcaagcagtggacggagaagttgggggccgacgtgatcgtg
agcgacctcaagtgcgagtcccccgaagagttctggaaacgcgatttccgctacgtccgg
aacgacctcatgtgccgcaaactctacgacaaagtccccccaaccccgctgtccaaaaac
agcactttcacccaggactcggggacgcgcccgaactcttatttggagccgaacagggtc
tccatctcggtgctcgtccccgggttgctgttggtgtttgtcacgtccgctttcactgtc
gtagggatgcttgtgtttattttgaggaatcgaaagaggtcaaagaggagggacgggaac
tcttcggcctcggagatcaattccttacagacagtgtgtgactcgtcttattggcacagc
gggccttataacgcagacgggggcgcgcaccggggattcgactgcagcacgcacctctcc
acgacaaatgacgcgtaa
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