Larimichthys crocea (large yellow croaker): 104925804
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Entry
104925804 CDS
T04659
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104925804 (supt6h)
03036 Chromosome and associated proteins [BR:
lco03036
]
104925804 (supt6h)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104925804 (supt6h)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104925804 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
104925804
NCBI-ProteinID:
XP_019108738
LinkDB
All DBs
Position
XXII:904518..921791
Genome browser
AA seq
1768 aa
AA seq
DB search
MSDFIESEAEESEEEEFEEKDLKPKKTQRFMEEDDEEDEENTEDQDEQGNLRGLIDDGDE
EEEEGEDEEARKSGSGGGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKK
YDRVKTLDDDEEDDDEKDLIADEIFHGDAEGELEEGEAVDEPLHHGDDDEEGEDEESDID
DFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDE
ESWDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRTTDMPERFQLRSIPVKPAE
DEELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQ
FEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISA
DPDKPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKASKKRLK
KIKEVSEDGEEEELEVEQQEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFG
ENLRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLR
QTFQERAKINTKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEDEGLLSI
DICIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAK
ELKSKLIAEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDENQGKGIRVLGVAYA
PSRDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKAHDIENLKRFLSSKKPHV
VAVAGENRDAQMIMEDMKRTIGELEQESSLPAVGVELVDNELATLYMNSKKSEVDFRDYP
PLLRQAVSIARKIQDPLMEYAQVCSTDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVN
EVGVDVNKAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKV
FINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAG
ALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNTE
EVFNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFP
ELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRI
MKIDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIK
RVIAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEG
KENAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLSHKYFQECHGGNKEKMEELL
VRTKREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEYVTITSDGFRYRSQIFPTVNGL
FRWFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAI
AAVTGQGQNPNTTPAQWGSSQYGYSGSTGGGGGGSSSAYHVFATPQQPIATPMMTPSYSY
TTPSQQALGTPQYHGSTPQSSHSHAHTHPHGSHVSHHSHHAHHSSSSSGGGGGGSSSSSH
HGHSSGTPSSSTSSRGRTPQQQQPKPSGSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTP
RPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttatcgagagcgaggctgaagagtcagaggaggaagagtttgaagagaaa
gacctaaagcccaagaagacccaaaggtttatggaggaagatgatgaagaggatgaagag
aacactgaggaccaggatgagcaaggaaatttacgcggactcattgatgatggagacgag
gaggaggaggaaggagaggatgaagaagctcgaaagagtgggagtggaggggggagtgac
tcagaagaggaagtgaggcatcggcgtaaaaagcgcaattacgacgactacctggatgac
gatgatctcgacctcattgaggaaaatttgggcgtcaaagttaaaagaaggaagaagaaa
tacgaccgtgtaaaaacacttgacgatgatgaagaagacgatgatgagaaggacttgatt
gcagatgaaatctttcatggggatgcagagggcgagctggaggaaggcgaggctgtcgat
gagcctctccaccacggagacgacgatgaagaaggagaggacgaggagtcagatattgat
gattttattgtggatgatgatggtcaaccgatcaccaaaaagaggggcaagaagttctca
ggatacacagatgcagccctccaggaggcccaggaaatctttggtggcgactttgacttt
gctgactttgacgcagacgcttacgaccagggcgaagaggaagaagaggaccaggacgaa
gagagctgggaccgacccaagaagcagactaagagaagacaagggaggaagagcatcttt
gagatctacgagcccagcgagctggaaagtagtcatatgaccgaccaagacaatgagatc
cgtactacagacatgcctgagaggttccagttacggtccatccctgttaaacctgctgag
gatgaggagctagaagaggaagcagagtggatcttccggcacggcttctccactctcact
atctccatgcaggagagcactgactatctagacagggggacaaccacaaacttcagcagg
aaaggtcccagcacaattgccaagatcaaagaagcccttaacttcatgaggaatcaacag
tttgaggttccattcatagctttctacagaaaagaatatgtggagcctgaactcaacatc
aatgacctgtggaaggtttggcagtgggatgaaaagtggacccaactgaagacccggaag
cagaacctgactcgtctgtttcagaaaatgcagtcctaccaatttgagcagatctcagcg
gatcctgacaaacctttggctgacggcatccgtcctctggacactgctgacatggagagg
ctaaaagatgtgcagactcttgaggagctaggtgacgtgtacaaccactttctgctctac
tatggccgagacattcccaaaatgcagaatgctgctaaggccagcaagaagaggctgaag
aagatcaaagaagtgtcagaggatggtgaagaagaggaactggaggtcgaacaacaagaa
gaagaacagaaaggtcctgacctcaagctggcgtctcgtagagatatgtacagcatctgt
cagagtgttggacttgatggtttggctaaaaagtttgggttaactccagagcagtttgga
gaaaatctgagagacagttaccaacgtcacgagaccgagcagttcccagcagagcctgta
gagctggccaaagattatgtttgcagtcagttttccactcctgaggcagtgctggaaggg
accaggtacatggtggccatgcagattgcccgtgaacctctggtcagacatgttctccga
cagaccttccaggaaagagccaaaatcaacaccaagcctacgaagaaaggcaaaaaggag
gtcgacgaggctcattttgcctactccttcaagtatcttaagaacaagcctgtgaaagag
ctgaatggggatcagttcttgaagatgtgcctggctgaggacgaggggctgctttccatt
gacatctgtatagaccttataggtgtgaaaggatatgccggcgaccagacctactttgat
gagatcaaacagttttactacagggatgagttcagtcaccaggtgcaggagtggaacagg
cagcgaactctggccatagagagagcgctcactcaattcctctaccctcagatggcaaag
gagctcaagagcaagcttatcgctgaggccaaagagagcattgtcaggtcctgctgtcgt
cggttgtataactggctcaaggtggctccttacaggccagaccagcaggttgaggaagac
gatgatctgatggatgagaatcaaggcaaaggcatccgggtgctgggtgtcgcctatgca
cccagcagagatacaccagtcttctgtgctctgatcaatggggaaggagaggtggtcgac
tttttgcgtctgccctacttcatgaagaggaggaatgccttcagggaggatgagagagag
aagaaggcccacgacattgagaatctcaagaggtttctgtccagtaagaaacctcacgtg
gtggctgttgctggggaaaaccgagacgctcaaatgattatggaggacatgaagaggact
attggtgagcttgagcaagagtcgtctctgcctgctgtaggagtggaacttgttgacaat
gagttggccacgctgtacatgaacagcaagaagtctgaggttgatttcagggattaccct
cccttgctgcgacaggctgtgtcaatagccaggaagatccaggatcccctgatggagtat
gctcaggtgtgcagcaccgatgatgatattctctgcctcaaactacacccgctacaggaa
cacgtggtgaaggaagatctgctctgtgctctttactgtgaattcatcaaccgtgtcaat
gaggttggagtggatgtgaacaaggccatcgcccaccctcacactcaaagcctggtccag
tatgtttgtggtctgggaccaaggaaggggtcccatctgctgaagattctgaagcagaat
aacactcgtctggagaatagaacccagctggtcacaatgtgtcacatgggacccaaagtt
tttatcaactgtgctggtttcatcaaaatcgacactgcgtcgctcggggacagtacggac
tcctacatcgaggtcctagatggatctcgtgtccacccagagacgtacgagtgggctcgc
aagatggctgtggacgcccttgaatatgacgagtcagcagaagatgccaatccagctgga
gctctggaagagatcttggaaaatccagaacgcctcaaagatctggacctggatgccttt
gcagaagagcttgagagacagggttacggcaacaagggaattactctgtatgatatccgt
gcagagttgagctgtaggtacaaagatctgagagttgcttacagagtccccaacactgaa
gaggtcttcaacttgctgaccaaggagactccagagaccttttatatcggtaagctgatc
accagtatagtgaccggtatcgctcaccggcggcctcagggagagagctacgaccaggcc
atccgcaacgatgccacagggttgtggcagtgtcccttctgtcagcaggataacttccct
gaactcagtgaggtgtggaatcactttgacagtggttcatgtccaggtcaagccatcggt
gtgcggtccagattagataacggtgtccagggattcattcccaccaagtttctcagtgac
aaagtggtcaaacaccctgaggagagggtcaaggtgggcatgacagttcactgccgcatc
atgaaaatcgacattgagaagttcagtgtggacctaacatgccgcacctcagatttgatg
gacaaggccaacgagtggaagctccccaaggacagctactacgactttgacacagagtcc
gaagaccaaaaacaggaggaggagctcaaaaagaaacagcagcgaacaccatatataaag
cgtgtgatcgctcatcccaacttccacaatatcagtttcaaccaagcagagaagatgatg
gagaccctggaccagggagacttgatcatcagacccagcagcaagggagagaaccacctc
accgtcacctggaaagtggctgatggcatctaccagcatgtggatgtgagagaagaaggc
aaagaaaacgcattcagcttaggacacactctctggatcaataatgaagaatttgaagat
ctggatgaaatcactgctcggtacatccagccaatggcgtcgttcgcccgggatcttcta
agtcataaatacttccaggagtgccatggaggaaacaaggagaaaatggaggaattattg
gtcaggacaaagagggagaagcctacttttattccgtactttatttcggcgtgtaaagat
ctgccaggaaaattcatactgggctaccagccccgcggaaaaccacgggttgagtatgtg
accatcacctcagatggtttccgctaccgttcacagatatttcccactgtgaacggacta
ttccggtggtttaaggaccattaccaagagcctgtgccaggaatcactcccagcaatagc
agccgaacaagaacacctgcatccctgaacgccaccccagccaatattaacatcgcagac
ttgacgcgagctgtcaacgcactcccacgcaacatgacctctcagatgttcagtgccatc
gccgcagtcacaggccagggccagaacccaaacaccacccccgcgcagtggggctcaagc
cagtacggctacagtggcagcacaggaggaggaggaggagggagctcctccgcttatcat
gtatttgccacacctcagcagcccatagcaacacccatgatgacgccgagctactcctac
accacgcccagccagcaggccctgggcacgccacagtaccacggctccaccccgcagtcc
tcgcactctcatgcacacacccacccacacgggagccacgtgtcacaccacagccaccac
gcccaccacagcagcagcagcagcggcggtggcggcggcggcagcagcagcagcagccac
catggccattcgtccggcacgccgtcgtcgtcaacttcatccagaggacggacgccgcag
cagcagcagccaaagcccagcggcagcaatgcctctgctgtggactggggcaagatggcg
gagcagtggttgaaagagaaagaagcagaggggaggaagaaagcccagaggatgacaccg
aggccgtcacccagccccatgattgaaagtacacccatgtcgattgctggagacgccaca
cccctgctagatgaaatggaccgatag
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