Larimichthys crocea (large yellow croaker): 104925949
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Entry
104925949 CDS
T04659
Name
(RefSeq) cell adhesion molecule-related/down-regulated by oncogenes isoform X2
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104925949
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Adeno_E3_CR1
Fn3_VIN3
Ig_VEGFR-1-like_5th
DUF7359
Motif
Other DBs
NCBI-GeneID:
104925949
NCBI-ProteinID:
XP_010738003
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Position
VII:24822693..24852943
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AA seq
1123 aa
AA seq
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MDSGLRVLLSTVLCLSQSLLISCSSQYPSFLSEPASLVLSRGSAAHLHCLVSPPSAVVSW
RFRGLPLVQDTLPGVELNAGSLTISSLKPGHVGVYQCVAHLGHGPAIASRHARVDIAEIS
EYEDGRRRSLSVQEGSTVLIECPLPHSVPPALPRLRVRGKRIEMSTDDYLVLPSGNLQII
SVSAEHQGMYKCGAFNPVTGETVVQPHGTKLSVKHSDSSPPVRIVYPTAPVIVSVQQSQP
LMLECTVSGSPAPAAKWFKNGKEVTPGPSHQRQHNNLAFVAVTRSDEGSYTCAADTEQGT
VMSANYTVKVLEPVSITEGLTNQLVSPGSSARFTCTAKGNPSPNVTWLFNADPITPSHRF
QISGSSLVITEVIPQDEGVFQCLLDNGIGSAQSSGMLSTQSDPQLGSTAGVLLEASPSLH
SMQSDEGHERFLTEDEGDTINLPSDRAGDRPTPEAPIIISPPQTHKPDMYDLEWRAGRDG
GSPINAYFVKYRKVDEMGTVVGNWHTVRVPGSEKTLRLSELESSSLYEVLMVARSSTGEG
QPAMLTFRTGKEKSTTSNKNPSKPPVILVPPKAPEDKTPNTHFGVVIHDRVPEAPDRPTI
SMATESSVYVTWIPRANGGSPITAFRVEYRRGRSAEWVVAADNISPLKLSVEVRNLEPGS
AYKFRVVAMNMYGESPHSIPSKLYQVPQASPRIADRPVVGPHISSTDAISDTQIMLRWTY
SPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGVKHWHMIGHLQPETSYDIKMQCFND
GGESEYSNVMICETRARQSPGSPSQHPITPPGPHPQEPPSPPGGLLYLIVGCVLGVMVLI
LLAFIAMCLWRNRQQNNMHKYDPPGYLYQPAEMNGHVLEYTTLPGSSRINGGVHGGYGHS
GPILPQGCHHLHHKLPNGLALLNGNGSLFSPGHPHSHDGTLPHSTRDCEHSHPHHHHNGG
GMYTALPQSESSECMSCQNLCNNNRCYSKTNSTFSSGTLPLMHRVASCQQDGLEMVPLGQ
VSSQCHGPDSQMHSGDQGADAGYQPDEDNESSPSQHSCCLVRNNENCPADNTAEEELDCV
DMEGPVVCWESLGLPDLDCDEKPGWISSSSLAGELIQPSPQEV
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctaagggtcctcctgtccactgtgctgtgtctcagccagtctctgctc
atcagctgctcatctcaatatccctctttcctctctgagccggcctctctggttctgagt
cgaggctctgctgctcacctgcactgcttagtaagccctccttcagcggtggtctcctgg
cgcttcagaggtcttcccctggtccaggacaccctccccggtgtggagctcaacgcgggc
tccctcaccatctcctcccttaagcccggccatgttggcgtctatcagtgcgtggcacac
ttaggccatgggccagcgatcgccagccgccacgcgcgtgtggacatagcagaaatctca
gaatatgaagacggcagacggcggtcgttatcggtgcaggaaggcagcaccgtccttata
gaatgtcctctaccgcacagcgtgcctccagccctgcctcgactcagagtacgagggaag
aggatagaaatgtcaacagacgactatttagttcttccatctggaaacttgcagattatc
tctgtttcagccgagcaccagggcatgtataaatgtggtgcgttcaaccccgtcactggg
gaaaccgtcgtgcaacctcacggtactaagctatcagtaaaacattcagactcttccccc
ccagtacggatcgtttaccccaccgccccggtgattgtttcggtgcagcagtctcagccg
ctgatgttggagtgtaccgtgtctggtagtcctgcaccagcagccaaatggtttaaaaat
ggtaaggaggtcacaccggggccttctcaccaacggcagcacaacaacctggcctttgtc
gcggtgacgaggagtgatgaggggagttacacctgtgctgctgacaccgagcaggggact
gtgatgagcgccaactacactgttaaagttcttgagcccgtgtccatcacggagggcctg
accaaccagctcgtctctcccggctcctccgctcgcttcacctgcacagcgaaaggaaac
ccgtcacccaacgtcacctggctgttcaacgccgaccccatcaccccgtcacatcgcttt
cagatctctggatcctcgctggttattacagaggtgataccgcaggacgagggcgtgttt
cagtgtctgctggacaacgggattggctcggcacagtcgtctggaatgctctcgactcag
tcagatcctcagctcggctccacggccggcgtgctcctggaggcttcgccgtcgcttcat
tccatgcagagcgacgagggccacgagcgcttcctgaccgaggacgagggagacacgatc
aacctgccgtctgaccgagctggtgaccgtcctactccagaggctccgatcatcatcagc
ccgcctcagactcataagcctgacatgtacgacctggagtggagggcggggcgcgacgga
ggcagtccaatcaacgcctattttgtcaaataccgtaaggtcgatgaaatgggaacagtg
gtggggaattggcatacggttcgagtccctggcagtgaaaagactctgcggctgtcagag
ctggagtcctccagtctctacgaggtgctgatggtggctcggagttcaacaggcgagggc
cagccggccatgctcaccttccgcaccggcaaggagaagagcaccacctccaacaagaat
ccgtccaagcctcccgtcatcctggtgccccccaaagctccagaggacaaaacccccaac
acacactttggtgtcgtcatacacgacagagtacccgaggcccccgatcgccccaccatc
tccatggcgactgaaagttcggtgtacgtcacctggatcccgagagccaacggcggctct
ccgatcacagccttccgtgtcgagtacagacgcggccgcagcgcagagtgggtagtcgcc
gcggataatatctcacctctcaagctgtctgtggaagttcgcaatctggagcctggctcc
gcctacaagtttcgcgtggtggcgatgaacatgtacggcgagagtccgcacagcattccc
tccaagctgtaccaggtgccgcaagccagcccgcgcatcgcggaccgccctgtggtcgga
cctcacatctcgtccacggacgccatcagcgacacacagatcatgctgcgctggacttac
agtccctcgagtaacaacaacactccgatccaaggcttctacatctactaccggcccaca
gacagcgacaatgacagcgactacaaaagggacgtggtcgaaggtgtaaagcactggcat
atgattggacatctccaacctgaaacctcctatgatatcaagatgcagtgctttaatgac
gggggagagagtgaatacagcaacgtcatgatctgtgagaccagagcacgtcagtcccca
gggtcgcccagtcagcaccccatcaccccgccgggcccccacccgcaggagccacccagc
ccacctggaggactgctgtacctgattgtgggctgtgttttgggagtgatggtgctcatc
ctgctggcttttatcgccatgtgtctgtggaggaatcggcagcagaacaacatgcacaag
tacgaccctcccggctacctctaccagccggctgagatgaatggacatgttctcgagtac
accacgctgccaggctctagccgcatcaacggaggcgtccacgggggatacgggcacagt
ggtcccatcttacctcaaggctgccatcacctccaccacaaactccccaacggcttggct
ctgctcaacggcaacggcagcctgttctcacccggccacccacacagccacgatggcacc
ctgccacacagcacccgggactgcgagcactcgcacccacaccaccaccataacggtgga
ggcatgtacacagctcttccccaatcagagtcgtctgaatgtatgagctgtcagaacctc
tgcaacaataacagatgttacagcaagaccaatagcactttctccagcggcactctgcct
ctaatgcatcgcgtggcgtcgtgccagcaggacgggctggagatggtgcctctgggccag
gtttcgtcgcagtgccacggtcccgacagccagatgcactctggtgaccagggggccgac
gcagggtaccagccagacgaggacaacgagtcctcgccctcgcagcattcctgctgtctg
gtcaggaacaatgaaaactgtccagcagacaacactgctgaggaggagctggactgcgtg
gacatggaggggcctgtggtgtgctgggagagtcttggcctcccagacttggactgtgac
gaaaagcctgggtggatctccagcagcagcctggcaggagagctgatccagcccagccca
caggaggtctga
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