Larimichthys crocea (large yellow croaker): 104925983
Help
Entry
104925983 CDS
T04659
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104925983
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104925983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
104925983
NCBI-ProteinID:
XP_027138458
LinkDB
All DBs
Position
X:30634566..30763192
Genome browser
AA seq
2217 aa
AA seq
DB search
MKSKINEKSLVLCSLSTVSSSVSLNEVFSLTVHVFTWFERVSIMVILLNCVTLGMYQPCE
NIDCSSDRCQILQAFDAFIYIFFALEMVIKMVARGIFGQRCYLGDTWNRLDFFIVMAGMV
EYSLDLQNVNFTAIRTVRVLRPLRAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIF
GIIGVQLWAGLLRNRCYPEENFTRDTGIRLPRPYYMADEDDERPFICSLPVDNGIMSCSD
VPARREGGRMCCLDKDDALYRQSLGLSPEPLANGTDRVAGLCVNWNRYYTRCHTGYSNPH
KGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCL
VVIATQFSETKQREHQLMQKQRAECSSNSTMASEPGDCYEELFQLVCHVLRKARRKTVAL
FNTLRGKPRGFRGVGRGRGGGEGRERKANGRGGRERRAMRRHGAPCPHHNKPDHASPMAL
TTASATAGCPQCAAALSLTDGVGPVHSTNDEAEEGAVEETDREGEHCSSKEKDKKGQKNQ
KKSCKDVWHDIRMKLWGIVESKYFNRGIMIAILINTISMGIEHHEQPEELTNVLEICNIV
FTSMFSLEMILKITAFGSFSYLRNPYNVFDGIIVIISVCEIVGQSDGGLSVLRTFRLLRV
LKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTETGDTV
PDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAATSPIAALYFVALMTFGNYVLFNLLV
AILVEGFQAEGDANRSYSDDDRSSSNFDESEKHDSIKLSDPRICTLTPNGHLELGGLSGS
RGSYSSERRSFTIESRKSSVMSLGKSSLERRSLSLRHGRSPNYHNWGRPFPPQSAWSRRS
SSNSLGRRSYGFGGAPIVGGSLRVHSTRSPHSYPYAAEQESLLSHPSHSHHPLHPHHPPP
PPSFFSRHFAVRRDRRALSLELPELHRAGGQPPGLPPVHLDSGRRSGSGAGGSITGGSGA
GSGLGVDHRDCNGKTPGPHTQLMAEVFPHVSARKDRADLDEETDYSLCFRIQKMMEVYKP
DWCESREEWSVYLFSPQNKFRLLCQSIIAHKLFDYVVLAFIFLNCITVALERPKILQGSL
ERVFLTISNYIFTAIFVAEMTVKVVSMGLYLGEKAYLRSSWNILDGFLVFVSLIDIVVSM
AGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFG
ILGVQLFKGKFYYCVGFDVKNITNKSECLAANYRWVHHKYNFDNLGQALMSLFVLASKDG
WVNIMYHGLDAVGIDKQPMINNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQ
EVEEARRREEKRQRRMEKKRRKAQKLPYYASYGPARLAIHTLCTSHYLDLVITFIICINV
ITMSLEHYNQPQSLETTLKYCNYFFTSTFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLL
SVMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGN
LGLLFMLLFFIYAALGVELFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWN
GIMKDTLRECPPDGPGSDYGCHAGLQFISPLYFVSFVLTAQFVLINVVVAVLMKHLDDSN
KEAQEDAEMDAEIELELAQGGLCCMMGGIGAIAGATGGAASGAGVGGGASGAITAGTVGG
PSGGVIAPLRDGGGGGAAHEGHSHHRCRLFSPTQESQWLDSVSLLIKDSLEGDMIDNLSG
SVFHHYCSAPVCKDCKGHPQEIQLAEVEQASLMSEQLSDKSSSLALPDDLSLDEHSSYQL
LVRDSKRGSSDSHSSEELPTQGGYKGLQPSRSGSEEGVQELFEVGVHPQLNTPSLEQPSP
SHCTDGDGGGCSGGGGEFSPVFHLPADFFHPAAAAHPGSSGNNVGPGDRRPSRLASPASW
ASLRSPGANSRPLSSQHPSHSDSSLATGSSEGSLQTTLEEGLSFSVSPPRDLDLPMPLLC
PLPSHPLHPQGPDTGDQENHSLKRCSTTFKLQATRGHQRSQSSCGGGSTSPGCPRQDSMD
PSDEDMGTGAGGDGCRQTLNSEHLSETLNSLSLTSLLTPSSLASPLVKKCNSTGSLDQTN
LSARSKDGRHLYGIDAHGYLSNPWVDGRARGEEDSDITGFNLKSSSRPTDTSSRKNR
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaaaattaatgaaaagtccttggtcctctgttctctatccactgtgtcctca
tctgtatcgctcaatgaggtgttctccttaacagtccatgtttttacgtggttcgaacgt
gtgagtattatggtgatcttgttgaactgcgtgaccctggggatgtaccagccgtgtgag
aacatcgactgctcctcagaccgatgccaaatactacaggcttttgatgcattcatctac
atcttcttcgctctggagatggttataaagatggtcgcccggggaatctttggtcaacgc
tgttacctcggggacacgtggaaccgactggatttctttattgtcatggccgggatggtt
gaatactcgctggatctacagaatgtcaacttcacggccatcagaacagtgagggtactg
cggcctctcagagcaatcaacagggtgccaagcatgcgtatccttgtgaacctgctgctg
gacactctgcccatgctgggtaatgtcctactcctctgcttcttcgtcttcttcattttc
ggcatcatcggggtgcagctgtgggcggggctgctgaggaaccgctgctacccggaggag
aacttcacacgggacacaggtatcaggctccctcggccctactacatggctgacgaggat
gatgagcgacccttcatttgctccttgccagtcgacaacggcatcatgtcctgctccgac
gtcccagcccgccgtgagggagggaggatgtgctgcttggacaaagacgacgccctgtac
cgccagtcgctgggcctgagtcctgagcctttggccaatgggaccgaccgtgtcgcaggc
ctctgtgtcaactggaaccggtactacacccggtgtcatacagggtacagcaaccctcac
aaaggagctatcaactttgacaacattgcctacgcctggattgtcatcttccaggtgatc
actctggagggctgggtggagatcatgtactatgtgatggatgcccattccttctacaac
ttcatctacttcattttgctgattattgtgggttccttctttatgatcaacctgtgcctc
gtggtcatcgccacccagttctcagagaccaagcaaagggagcaccagctgatgcagaag
cagcgagcagagtgttcgtccaactctaccatggccagtgaacccggggactgctatgaa
gagctcttccagctggtctgccacgtcctccgcaaggccaggaggaaaactgttgccctt
tttaacaccctgaggggtaaacctcgtggcttccggggtgtcggtagaggtagaggagga
ggagaagggagggagagaaaagccaatggaagaggaggacgtgagaggagagcaatgagg
aggcacggagccccctgtccccaccataataaaccagaccacgcctcacccatggccctc
accaccgcctctgccaccgccggctgtcctcagtgtgccgcagccttgtcacttaccgat
ggggtaggaccagttcacagtacaaacgatgaagcagaggagggagctgtggaggaaacg
gacagggagggggaacattgcagtagtaaggagaaggacaagaaaggtcagaagaatcag
aagaaaagttgcaaggatgtgtggcacgacataaggatgaagctgtggggaatcgtggag
agcaagtacttcaatcgaggcattatgattgccatcctgatcaacaccatcagcatgggc
attgagcaccacgagcagccagaggagctcactaatgttctggagatctgcaacatcgtc
ttcaccagcatgttctccttggagatgatcctcaaaatcactgcgtttggctccttcagc
tacctgagaaacccctacaatgtctttgatggaatcattgtcatcataagtgtatgtgag
attgttggccagtctgacggtggtttgtctgtgctgaggacattcagactgctgagggtg
ctaaagctggttaggttcatgccagctttgaggagacagctggtggtcctcatgaagacc
atggacaatgtggccaccttctgcatgctgctcatgctcttcatcttcatcttcagtatc
ctgggaatgcacatctttggctgtaaattcagtctcaggacagagaccggtgacacagta
ccagacaggaagaactttgactccctgctctgggccattgtcactgttttccagattttg
acccaggaggactggaatgtggttttgtacaatggtatggcagccacttcaccaattgcc
gctctctactttgtggccctcatgacctttggaaactatgtcctcttcaacctgttggtg
gccatcttggttgaaggttttcaggcagagggtgatgccaatcgttcttattcggatgat
gaccgctcctcttccaactttgacgagagcgagaaacacgactctataaagttgtctgac
ccaaggatctgcacactgacacccaatggccatctggaactgggtggtctttcagggtcc
agaggatcctattcctcagagaggcggagcttcaccatcgagtccagaaagagcagtgtg
atgagcctgggcaagagtagccttgagagacgctccctctctctgcgtcatggccgcagt
ccaaactaccacaactgggggcgtcctttccctccacagtctgcatggagccgcaggtca
agctcaaacagtctgggcaggaggagctatggatttggtggggctcctatagtaggaggg
agcctccgtgtacacagcacccgctccccccactcctacccctatgccgctgagcaggag
tctcttctctcacacccatcccactctcatcatcctttacaccctcatcatccacctcca
cctccatcgttcttctccagacactttgctgtgaggagggatcgacgggctctttctcta
gagctcccagagctgcatcgggcaggtggacagcccccgggcctgccccccgttcaccta
gactccgggaggaggagtgggtctggggcagggggatccatcactggggggtctggagct
ggtagtggtttaggagtggaccaccgggactgtaatggcaagacaccgggtccccacacg
caactgatggctgaggtttttcctcatgtcagtgctcgcaaggacagagcagaccttgat
gaagagacagattatagtttgtgtttccgtatccagaagatgatggaggtgtacaagcca
gactggtgtgaaagcagagaggagtggtccgtctacctgttctccccacagaacaagttc
agactgctctgccagtccattatcgcccataagctctttgactacgtggtcctggccttc
atctttctcaactgcatcactgtggctttggagaggccaaaaatactgcaaggcagtctg
gaacgggtgtttctcacaatttccaactacatctttactgccatctttgttgcagagatg
actgtcaaggtggtgtccatgggtctgtacctgggggagaaagcctatctaaggagcagc
tggaacattttagatggtttcctcgtgttcgtgtctctgatcgatattgtggtgtcaatg
gcgggcggggctaagatcctgggggttctccgtgttctcaggttgctcaggacgttacgc
cccctcagggtgatcagcagggctccagggctgaagctcgtagtcgagaccctcatcaca
tccctcaagcccattggcaacatcgtccttatctgctgtgccttcttcatcatctttggt
attcttggtgttcagctctttaaaggaaagttctactactgtgtgggtttcgatgtgaag
aatatcactaacaagtccgaatgcctggctgccaactatcgatgggttcatcacaaatac
aactttgacaaccttggacaggctttaatgtctctgtttgtgctggcctcaaaagatggg
tgggtcaacatcatgtaccatggactggatgcagtgggaatagacaagcagccgatgatc
aacaacaacccatggatgctgctctactttatctccttcctcctgatcgtcagcttcttt
gtcctcaacatgtttgtgggcgtagtggtggagaacttccacaagtgccgccagcaccag
gaggtggaggaggctaggagacgagaggagaaacgccagcgtcgcatggagaagaagagg
agaaaggcccaaaagctgccctactatgcgtcatatggtccagctcggcttgctatccac
accctgtgcaccagccactatctggacttggtcatcacctttatcatttgcatcaatgtc
atcaccatgtctctggagcactacaaccagccacagtctctggagactacactgaagtac
tgcaactacttcttcacctccacctttgtgattgaggcgtcactgaagctggtagccttt
ggtttccgacgcttcttcaaggacaggtggaatcagttggacctagccattgtgctgctg
tcagtgatgggcatcaccctggaagagattgagatcaacgcctcccttcccatcaatccc
accattatcaggatcatgagagtactcaggatagcacgagtgttgaagttgttgaaaatg
gcaaccgggatgagagccctgctagacacagtggtccaggctctgcctcaggtgggaaac
cttggtctgctcttcatgttgctgtttttcatctacgcagctctgggtgtggagctgttt
ggagagctggtgtgtaatgctgactacccctgtgaaggaatgagtcgacacgccaccttt
gaaaactttgggatggccttcctcacactcttccaggtctctactggtgacaactggaat
ggcattatgaaggacacactgagggagtgcccaccggatggtccaggcagcgactacggc
tgccacgctggactgcagtttatctctccgttgtattttgtttcctttgtgcttacggct
cagtttgttctgataaacgtggtggtggccgtgctgatgaagcatctggatgactccaac
aaggaggcacaggaggacgctgagatggatgctgagatcgagctggagctggctcaggga
ggcctctgttgcatgatggggggcatcggcgccatcgcgggggccacaggtggtgctgca
agcggggccggtgtgggtggaggagcgtctggtgcaattacagcagggacagtcgggggt
ccaagtggtggggtgattgcaccgcttcgagatggaggaggaggcggtgcagctcatgag
ggacactcgcatcatcgatgtcggctcttctctcccacccaggagagccagtggctggac
agtgtgtctctgcttattaaggactcgttggaaggggacatgattgacaacctctccggt
tcagttttccaccactactgctctgctcccgtctgtaaggactgtaagggccacccacaa
gagatacaactggcggaggtggagcaggcatctctgatgtcagagcagctgtcagacaag
tcatcttctctggcgctacctgatgacctcagcctggacgaacacagcagctaccagctg
ctggtaagagacagcaagaggggcagcagtgactcccacagttcggaggagttgcccacc
cagggtggctacaaagggcttcagccctccagatcaggaagtgaggaaggggtccaggag
ttatttgaggtgggcgtccatcctcagctgaatactccctcgctggagcagccaagtccg
tcacattgcacagatggagatggtggaggttgcagtggaggtggtggtgagttttcacct
gtctttcatctaccagcagacttcttccaccctgctgccgcggctcatccaggcagttct
gggaacaatgttggcccaggagacagaaggccgtccaggttggcttccccagcctcctgg
gcctcccttcgctcgcctggagcgaacagcaggcccctgagctctcagcatccgtcccac
agtgactcctccctggccacaggtagttcagagggcagcctacagaccactttagaggaa
ggactcagcttcagcgtatccccacctcgagatctggacctccccatgcctctcctctgc
cccctccccagtcatcccttacacccccagggaccggacacaggagaccaggaaaaccat
tcactaaagagatgcagtactacttttaaactccaagccaccagggggcaccagaggagt
caaagcagctgcggtggtggcagcaccagccctggctgcccacggcaggactccatggac
ccttcagatgaggacatgggcacaggggcgggtggggatggctgccggcagaccctcaac
agcgaacacttgtcagaaacactgaatagcctctcactgacatcactgctcaccccgagc
tctctggcatctccattggtgaagaaatgtaacagcacaggctcactggaccaaaccaat
ctatctgcccggagtaaagatggacggcacttgtatggtatagatgcccatggttacttg
tccaatccctgggtggatggaagggcgagaggtgaggaggacagtgatatcacaggattc
aacttgaaaagcagcagccggcccacagacacaagctcgaggaaaaatagatga
DBGET
integrated database retrieval system
