Larimichthys crocea (large yellow croaker): 104926071
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Entry
104926071 CDS
T04659
Name
(RefSeq) neurexin-3a isoform X1
KO
K07377
neurexin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104926071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104926071
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
104926071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
104926071
NCBI-ProteinID:
XP_019122333
LinkDB
All DBs
Position
V:complement(3490240..3665567)
Genome browser
AA seq
1678 aa
AA seq
DB search
MDLVGFSIRLQMFLSTCLGLEFLGTSGQWARYLRWDASTRGDLSFQFKTGASEALLLYFD
DGGYCDFLQLAVVEGRLQLRFSIDCAETTVVSDRRVDDSRWHFATLSRYNLRTVLILDGQ
AKADEVRPQRLFMKIVSDLFLGGVPQDIHSSALTLPTVRNMQPLRGTITDLKYGISQPLF
LGSLKVPLESEGWCTVNPCENGGTCSVVDGEPVCDCSKTEYKGRFCSEEVINNMPGLAHM
MAEQAKSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSAD
YVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNTWHDVKVTRNLRQVTISVDGILTT
TGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLAR
IVDPKMKIQGEVSYKCENVATLDPISFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLI
LFTHGKPQERKDAARSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQTKVNDGAWY
HVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPTDRTNLILPTELWTAML
NYGYVGCIRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKQPGKQCESYPCKNRGVCKEGWN
RFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPTIMHTEAEDVSLRFRSQRAYGLLM
ATTSRDSADTLRLELDGSRVKLTVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVR
RGKTYKLTVDDDVAEGQMVGDHTRLEFHNIETGIMTERRFVSSIPSSFIGHLQSLRFNGM
LYIDLCKNGDIDYCELNARFGVRSIIADPVTFKSKSSYLSLATLQAYTSMHLFFQFKTTS
PDGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNLIKGKSERALNDNQWHNVAITRDN
SNTHTLKVDATATSQSINGAKNLDLKGDLFIAGLGPGMYGNLPKLVASREGFQGCLASVD
LNGRLPDLLNDALFRSGQIERGCEGPSTTCQEDSCANMGICIQQWENYTCDCSMTSYTGT
QCNDPGTTYIFGKGGGLITFKWPANERPSTRTDRLTVGFSTSLKDGILVRIDSAPGLGDY
LMLHIQQGKIGVTFNIGTVDISVEESSTPVNDGKYHVVRFTRNGGNATLQVDNWSINEHF
PTGNSDVERYQMANKKIPFKYARPVEEWLQEKGRQLTIFNTQATVTIGGSDRSRPFQGQL
SGLYYNGLKVLNMAAEGNPNIKINGSVRLVGDVPSAPGSARTTAMSPEMSTTFIETTTMM
STTTTRKHRSSSTVQHSSDDLVSSAECSSDDEDLEECETSHAGGLGAELVIPVLEDPLAH
PSVAPRAPFIPTPSTHHPLLTIIETTKESLSKATEAGVPCLSDRGSDDCDDDGLVISGYG
SGEAFKSNLPPTDDEDFYTTFSLVTDKTFSTSSFEGGYKAHAPKTFRPNKPSISRRGRAT
TTAIPLTADQSRTTATSASTATLHNAPAKQPAGKMNNRELKPQPDLVLLPLPTSFEVDST
KLRGPLITSPMFRNIPTALPTEPGVRRVPGPSEVVRESSSTTGMVIGIVAAAALCILILL
YAMYKYRNRDEGSYQVDESRNYITNSAVQSNGAVMKDKQQSLKGSNKKQKNKDKEYYV
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgtaggtttttctatcaggctgcaaatgttcctcagcacatgtctgggactg
gaatttttaggcacgtcaggtcagtgggcacgctacctccgctgggacgccagcacccgc
ggtgacctcagcttccagttcaagacaggcgcctcggaggcgctgctgctgtacttcgac
gatggaggctactgtgactttctgcagctggcggtggtggagggccgactgcagctgcgc
ttcagcatcgactgcgccgagaccacagtggtgtccgacagacgggtggatgacagccgc
tggcactttgccaccctgagcaggtataacctgcgcactgtgctcatactggacggtcag
gccaaagcagatgaggtgcggcctcagcgtctgttcatgaaaatagtcagcgacctgttc
ctgggtggagtgcctcaggatatccacagcagtgcgctcacacttcctacggtgcgaaac
atgcagcccttaaggggcacaattacagacctcaaatatggcatctcccagcccctgttc
ctgggaagccttaaggtgcccctggagtcagaagggtggtgcaccgtgaacccgtgtgag
aatggcggtacatgctcagtggtggatggagaaccggtctgtgactgctccaaaacagaa
tacaagggccgcttctgcagtgaagaggtcatcaacaatatgccaggccttgcacatatg
atggcagaacaagctaaaagcaaagcaagggaagagaatgtggccactttccgtggctct
gagtatttctgctacgatctctcccagaaccccatccagagcagcagcgacgagatcacg
ctctccttcaagacgtggcagcgcaatggccttatccttcacaccggcaagtcagctgac
tacgtcaacctggcgctgaaggacggtgctgtttccctcgtcatcaacctgggatctgga
gcctttgaggccatcgtggaaccggttaatggaaagtttaatgataacacttggcatgat
gtcaaagtgacccgcaaccttcggcaggtgacaatatcagtggatgggattctgaccacc
accggctacacccaggaagactacaccatgctgggctctgatgacttcttctatgttggt
ggaagccccagcactgctgacctgcctggatctccagtcagcaacaacttcatgggctgt
ctcaaggaggtggtgtataagaacaatgacatccgtcttgagttgtcccgcctggctcgc
attgtggaccctaagatgaaaatccagggtgaggtgtcctacaagtgtgagaatgtggcc
accttggatcccatttcttttgagactcccgaagcttacatcagcctccccaagtggaac
accaagcggatgggatccatctctttcgatttccgtacgacagagcccaacggccttatt
ctcttcactcatggcaaaccacaagagcgcaaagacgctgcacgcagccagaagaacacc
aaggtggatttctttgcagtagagctgctggatggcagcctgtatctgctgttggacatg
ggctcagggaccatcaaggtgaaggccactcagacaaaggtcaatgatggtgcctggtat
catgtggatattcagagagatggacgctcaggcaccatctctgtaaacagccgaaggacc
ccgttcacagccagtggtgagagtgagattctggacctggagggtgacatgtacttgggt
gggcttcccactgaccggaccaacctcatcttgccgaccgagctctggacagcgatgctt
aactacggttatgtgggctgtattcgtgaccttttcattgatggtcgaagtaaggacatc
cgtcagattgctgaggcacaaaatggcgctggcatcaaaccatcgtgcaacaagcaacct
ggcaagcaatgtgaaagctacccgtgtaagaaccgaggtgtctgcaaagaaggctggaat
cgattcatatgtgactgcactggcactggctactggtcacgcacctgtgagagagaggcg
tccatcctctcctatgatggcagcatgtacatgaaggtggtgatgccaaccatcatgcac
actgaggccgaggacgtctccctgcgatttcgttcccagcgggcgtatggcctcctcatg
gccaccacctcccgagattcagccgacacactcaggctggagttggatgggagtcgcgtt
aaactcacggtcaacctagactgtatcaggataaactgtaactccagcaagggaccggag
accctgtatgccgggcaaaagctcaatgataatgaatggcatacagtgcgtgtggtgcgc
cgcggcaaaacctacaagctaacggttgacgatgatgtagcagaaggacaaatggtgggt
gaccacactcgtctggagttccacaacatcgaaacaggcatcatgacagagcgtcgattt
gtttccagcatcccatccagcttcattggtcatcttcagagccttagatttaatggcatg
ctctacatagacctctgcaagaatggtgatattgattactgcgagcttaatgcccgcttt
ggggttcgctccattatcgccgaccctgtcaccttcaaatccaagagcagctatctgagc
ctggccaccctacaggcctatacgtccatgcacctcttcttccagttcaagaccacctcc
ccagatggctttatactcttcaactctggagacggcaatgattttatcgctgtggaactg
gttaaaggatacatccactatgtttttgaccttggaaatgggcccaacctaatcaagggc
aaaagtgaaagggcactgaatgacaaccagtggcacaatgtggctatcacccgagacaac
agcaacacccacacactgaaagtagatgctacagccacaagtcagagcatcaatggggcc
aagaacctggacttgaaaggtgatctcttcatcgcaggactgggtccaggcatgtatggc
aatctgcctaaactggtggcttcccgagaaggcttccagggctgcttggcgtcggtggac
ctcaacggtcgcctaccagatctcctcaacgacgccttgtttcgcagcgggcagattgag
cgtggatgcgaaggtcctagcaccacatgtcaggaggactcctgtgccaacatgggcatc
tgtatccagcagtgggagaactacacctgcgactgctccatgacctcctacaccggcaca
cagtgcaacgaccctggaacaacgtacatctttggcaaaggaggaggcctcatcacgttc
aagtggccagccaatgagaggccgagcaccaggacggacaggctgaccgtaggcttcagc
acctccctgaaagacggcatcctggtcaggattgacagcgcgcctggtctgggtgactac
ctcatgctgcacatacaacaaggcaaaattggagtgacttttaacatcggcacagtggat
atcagtgtggaggagagcagtaccccagtgaatgatgggaagtatcacgttgtccgcttc
accaggaatggtggcaacgctacgctgcaggtggataactggtccatcaatgaacacttc
ccaacagggaacagcgacgttgaacgctatcaaatggccaataagaaaattcctttcaaa
tatgccagaccagtagaagagtggctacaagagaaaggacggcagctaacaattttcaac
acccaagcgacagtcacaatcggtggtagtgatcgcagccggccctttcagggtcaactg
tctggcctttattacaatggtctcaaggtgttgaacatggctgctgagggcaaccctaac
atcaagattaatggcagtgtgaggttggtaggtgatgtgcctagtgcgccaggctcagcc
aggaccacggccatgtctccagagatgtctactaccttcatagagactaccaccatgatg
tccaccactaccacacggaaacacagatcctcctcaactgtacagcattcgtcagatgac
cttgtgtcatctgcagagtgttcgagtgacgacgaagacctggaggagtgtgaaactagc
catgcaggtgggctaggagctgagttagtcatcccagtacttgaggatccattagcgcac
ccctctgtagctcctcgtgcacccttcattcccactccctcaacccaccacccactcctc
accattattgagaccaccaaagagtccctgtccaaggccactgaggcgggggtaccttgc
ttgtcggaccgaggcagcgatgattgtgatgatgatggcttggtgatatcggggtatggc
tctggggaagcgttcaagtctaacctgccccctactgatgatgaagatttttacacgacc
ttctccttggtaacagataagaccttttccacgtcaagctttgaaggtggctacaaagct
cacgcgcccaagacttttagacctaacaaaccttcaatctccagacgcggtagggctacc
actaccgccataccactaaccgccgaccagagccgcaccaccgccacctctgcctccacc
gcaaccctccacaatgctccggccaaacagccagctggcaaaatgaataaccgcgagcta
aaaccccagcccgacctagtgttgcttccattgcccacatcctttgaggtagacagcacc
aagctgaggggcccattaataacctccccaatgttccgtaatatacccacagcactcccc
acagagccgggcgtcaggcgagttccagggccctcggaagtggtccgtgaatctagcagc
accaccgggatggtcatcggaatagtggcggccgctgccctgtgcatcctcatccttctg
tatgccatgtataagtacaggaacagggatgaaggctcctaccaggtggacgaaagcagg
aactacataaccaactcagctgtgcagagcaatggcgctgtcatgaaagacaaacagcag
agcttgaaaggcagcaacaagaaacagaaaaataaggataaggagtattacgtgtga
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