Larimichthys crocea (large yellow croaker): 104926109
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Entry
104926109 CDS
T04659
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104926109 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104926109 (hdac4)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104926109 (hdac4)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104926109 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
104926109
NCBI-ProteinID:
XP_027133283
LinkDB
All DBs
Position
I:complement(6408891..6525223)
Genome browser
AA seq
1117 aa
AA seq
DB search
MSSHSRSGGLTNNEQPLELLKPATRNHFVDVSSAALPMQVPPTATAILPMDLRVVDHPHH
HHHHQQPSFGLVPQPHPTPPTSTACPASSEPGRGPVINHQEQQLQQELVALKHKQQLQRQ
LLIAEFQRQHEQLSRQHEVQLQEHIKHQQDLLALKHQQELLEHQRKMEQQRHEQELEKQQ
REYKLQQLKNKDRGQESAVASTEVKMRLQEFVLNKKKALAQRNLNHCLPSDPRFWYGKTQ
HSSLDQSSPPQTALSAYNHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPL
LRRKDGPITTAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPSENGVTISSSPGEASLLQ
RLAAREGSVSQLSLYTSPSLPNITLGLPATGPASTVVSGHQDGESRLALPALQQGIPLTP
PFLPTAHLPSYLASSALDREGAGGGTAGHNPLLQHMVLLEQGHSPIVGLGGLPLPSPAVS
KLARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQQFQQQQQQHIINKI
MSKPSDQVSAVSSSASGPARQHQSHPEETEEELREHQELSTSSSSSSSTSIQETGPLRGL
VIKQEPPDPQEQDEREQRDRQAEKDFLFRQQQALLLEQQRIHQLRNYQASMEAAGLSVSF
AGHRPLSRAQSSPASASFPMVVQEPPAKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHAGR
IQSIWSRLQETGLRAHCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCSVSPMFV
RLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASAELKNGFAVVRPPGHHAEES
TPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYTDPSVLYLSLHRYDD
GNFFPGSGAPDEVGSGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVV
LVSSGFDAVDGHASPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHDLTAICDASEA
CVSALLGNELDPIPDEVLQQRPNANAVHSMEKVLEAHSKYWRSLQRSASTLGCSLSEALQ
RDAEEAETVSAMASLSVANKHIGKRAEEEPMEEEAPM
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacagtcgatcaggtggtttgaccaacaacgagcagcctttggaacttctt
aaaccagccacacgcaaccattttgtggacgtgagctcggcagcactgcccatgcaggtg
ccccccaccgccacagccattcttcccatggacctgcgtgtagtagaccatccccaccac
caccaccaccaccagcagccctccttcggcctggttcctcaaccccatcccacgccgccc
acctccacagcttgtcccgcatcctcagagccaggccgtggtccagtcattaaccaccag
gagcagcagctgcagcaggagctggtagctctcaaacacaagcagcaactccagagacag
ctactgattgctgagttccagaggcagcatgaacagctgtcgcgacaacatgaagtccag
ctgcaggagcatatcaagcatcaacaggatttactggcgctcaagcaccaacaggagctg
ctggagcaccagaggaagatggagcagcagcgtcacgagcaggagctggagaaacagcaa
cgtgaatacaaactccaacagcttaaaaacaaggacaggggacaggagagtgcagtcgct
agtacagaggttaagatgcgacttcaggagtttgtcctgaacaagaagaaagccctggct
cagcgaaacctaaaccactgtctgcccagcgacccacgcttttggtatggaaaaacacag
cacagctctttggaccagagctctcctcctcaaacagcattgtcagcgtacaaccaccca
atgctgggcacatatgactcaaaagatgacttccctctccgcaaaacagcctctgagccc
aatctgaagcttcgttcccgactaaagcagaaagtgacagagcgtcgcagcagccctctg
ctccgaaggaaagatggtcccatcactactgccaagaagcgttccttagacgtggctgag
tctgcatgcaacagtgcaccaggctcaggtcccagctcccccaacaacagctccagtaac
atccccagtgagaatggggtcaccatctccagcagtccaggagaggcctctttgcttcag
aggttggctgcaagagaaggttcagttagccaactctctctctacacctctccttctctg
cccaacatcaccctgggactaccagccacaggtcctgctagcaccgtggtatcaggacac
caagatggtgagagtcgtctggcattgcctgcgttacagcagggcattcctctgacccct
ccattcctgcccactgcccacctgccctcctacttggcatcttcagctctggacagggag
ggggctggagggggtacggctggtcacaacccccttctccaacacatggtactgctggaa
cagggccacagtccaattgttggtctgggtggcctcccactgccgtcacctgctgtctcc
aaacttgcacggggccaccgtcccctgggaagaacccagtcagcacctttgccccagcag
caatgtggccaggcccaggctctgcagcagctagtggtccaacagcagcaccagcagttc
ctggagaaacacaaacaacagttccagcagcaacagcagcagcacatcatcaacaagatc
atgtccaagcccagtgatcaggtctcggctgtaagctccagcgcctcagggccggcgaga
cagcaccagagtcacccagaggaaacggaagaggaacttagggagcaccaggagctctcc
acctcatcctcatcctcatcctctacatctatacaggagacagggcctctgcgagggctg
gtcatcaagcaggagcccccagaccctcaagagcaggatgagagggagcagagggacaga
caggccgagaaggacttcctgttccgacagcagcaggctctgctgttagagcagcagcga
atccaccagttgagaaactaccaagcctccatggaagccgccgggttatcagtcagcttt
gccggacaccgccccctctccagggctcagtcttctccagcgtccgcctccttccccatg
gtagtacaggagccacctgccaagcctcgatttactacaggtctggtttatgactctttg
atgcagaagcaccagtgtatgtgtgggaacaccaccagtcatccagagcacgctggccgc
atccagagtatctggtcccgactgcaggaaacaggcctcagggcgcactgcgagtgtatc
cgtggtaggaaggcctcactcgaggagttgcagacagtccactctgaagcccacgtcctg
ctgtacgggaccaacccacttcggcagaaactagattgttcagtgagtcccatgtttgtg
aggttaccatgtggaggcataggggtggacagtgacactatttggaatgaggtccactcg
tccagcgctgctcgtctggccgtcggttcggtggtggagctcgtcttcaaagttgcatcg
gcggaactgaagaatggctttgctgtagttcgaccacctggacaccacgctgaggagagc
acgcctatgggcttctgttatttcaactcagttgcaatagcagccaagcttctgcaacag
aggctcaatgtcagtaaaatcctcattgtggactgggatgttcaccatggtaatggcacc
cagcaggccttctacacagaccccagtgttctctacctgtcactgcatcgctatgatgat
gggaacttcttccctggcagtggagcacctgatgaggtgggcagcggaccaggtgtaggc
ttcaatgtgaacatggccttcactggaggactggaacctcctatgggtgatgcagagtac
ctggctgcatttaggacggtggttatgcctattgcaaatgagtttgccccagacgtggtt
ctcgtatcttcaggctttgatgcggtagacggacatgcctctcccctgggaggatacaaa
ctgacagccaaatgctttggctacctgaccaggcagctgatgggtctggcaggcggtagg
ttggtgcttgccctggaggggggtcatgacctcacagccatatgtgatgcctccgaagcc
tgcgtctctgctctgcttggcaatgagttggaccccattcctgacgaggtgctacagcaa
agaccgaatgccaatgctgttcactctatggaaaaagttcttgaagctcacagtaaatac
tggcgctcactgcaacgctctgcctccacgctcggttgctcgttgagtgaagctcttcaa
cgcgatgcagaagaagctgagactgtctccgctatggcttcgttgtctgtcgccaacaag
cacattggaaagagggctgaagaggaaccaatggaagaggaagctcctatgtaa
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