Larimichthys crocea (large yellow croaker): 104926218
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Entry
104926218 CDS
T04659
Name
(RefSeq) integrin beta-3
KO
K06493
integrin beta 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03266
Virion - Herpesvirus
lco04081
Hormone signaling
lco04145
Phagosome
lco04148
Efferocytosis
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
104926218
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
104926218
04512 ECM-receptor interaction
104926218
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104926218
04148 Efferocytosis
104926218
09144 Cellular community - eukaryotes
04510 Focal adhesion
104926218
09142 Cell motility
04820 Cytoskeleton in muscle cells
104926218
04810 Regulation of actin cytoskeleton
104926218
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104926218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104926218
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104926218
04515 Cell adhesion molecules [BR:
lco04515
]
104926218
04090 CD molecules [BR:
lco04090
]
104926218
Membrane trafficking [BR:
lco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104926218
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104926218
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin beta subunits
104926218
CD molecules [BR:
lco04090
]
Proteins
104926218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
104926218
NCBI-ProteinID:
XP_010738332
LinkDB
All DBs
Position
XII:complement(6964331..6975580)
Genome browser
AA seq
817 aa
AA seq
DB search
MRKGVQVSKRTSPQGTHGRLVPVRLRHSPAMGTFLHRLVILFLCLSSAPNVFGSNICTSQ
GVATCQQCLAVHPNCAWCSQEEFGMGGSSVSRCDLKQNLLDGGCSSASVEFPSSTLTIQE
DTPLSAKASGAADDVTQLRPQKLSITLRPGDAKRFSVSVKQVEDYPVDLYYLMDLSYSMK
DDLARLRTLGNELAATMAKKTSKLRMGFGAFVDKTTSPYMYTYPPEAVENPCLQIHTTCK
AQFGFKNVLSLTEKVARFTEEVGKQQVSRNRDAPEGGFDAVMQAVVCKEKIGWRADASHL
LVFTTDAKTHIALDGRIAGIVQPNDGQCHLDNDNNYNKSTVLDYPSLALMTDKMSENNIN
LIFAVTAYVEPLYKAYSQLIPGTTVGTLSDDSGNVIQLIKEAYEKIRSKIELELLDVPEE
LSLSFNATCLNEEVIPGVRHCSGLKIGDTVSFSVEVQLRACPKEKNRTFTIKPRGFKDSL
EVTVDFACSCDCEAKAVANSSICSNGNGTYECGVCQCHQGRLGPRCECSVEDYSSSNNDN
CIEKPGGPLCSGRGDCLCGQCSCHANEFGEVWGKYCQCDDFNCLRFKGALCSDHGRCRCG
KCHCDSNWKGPNCNCSTVTDTCTSSIGMLCSGRGHCECGICHCTEVGAYGATCEKCPTCP
DSCTIKRKCVECKHFKRGQYIKDNTCNAVCKDEIKVVNELVFHDKNARNCSYKDENDCLV
HFQYYEDDSGNSILFVVKEPECPQGPDILVVLMAVAGAILLLGLVGLLIWKLLVTIHDRR
EFAKFEEERAKAKWDTGNNPLYKGATSTFTNVAYRGN
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaggcgttcaagtttcgaagcgaacaagtccgcagggaacacacggacgactc
gtgcctgttcggctccgacactctccagccatgggaacttttttacaccgtctggtgata
ctgtttctttgtttgtcatcggcaccaaacgtttttggttccaacatctgcacatcacaa
ggagttgccacttgtcaacagtgcttggctgttcaccctaactgtgcatggtgctctcag
gaggagtttggaatggggggatccagtgtatcccgctgtgacctgaagcagaatctgttg
gatggagggtgtagtagtgcatctgtggagtttccctccagcaccctgacaattcaagag
gacacaccgctcagtgctaaggcctctggagctgctgatgatgttactcagctaaggcct
cagaaactcagtataacactaagaccaggtgatgccaagcggttcagtgtgtcagtaaag
caggtggaggattacccagtggacctctactatctgatggatctttcctattcaatgaag
gatgatttagctcgccttcgcaccttgggtaatgagcttgccgcgaccatggccaaaaaa
acaagcaaattacgcatggggtttggagcctttgtggacaagactacatccccttacatg
tacacctatcctccagaggcagtggaaaacccttgtctacaaattcatactacatgcaag
gctcaattcggattcaagaatgtgctgtcactgacagagaaggtagctcgcttcactgag
gaggtggggaagcagcaggtgtctagaaatagagatgctccagagggtggatttgatgct
gtcatgcaggctgtggtgtgtaaggagaagattggatggcgtgcggatgcttcacacctt
ttggtattcacaactgatgccaaaactcacatcgctctggatggacgtatagctggaatt
gtccaacctaatgatggacaatgtcatcttgataatgacaacaattataacaaatctact
gtcctggactatccctcattggcgctcatgacagataaaatgtctgaaaacaatataaat
ttaatttttgctgtcaccgcctatgtggagccactctacaaggcgtacagtcagctcatt
ccaggcacaactgtgggaacactgtccgatgactctggtaatgttattcagctcattaag
gaggcttatgagaaaatccgctctaaaatagagctggagctacttgatgtcccagaagag
ttgagtctctctttcaatgccacctgcctaaatgaggaagtcatacctggggttaggcac
tgttctggcctcaagattggagacacagtgtcattcagcgtggaggttcagttgcgtgct
tgccccaaagagaagaatcgcacttttaccatcaaacctcgaggcttcaaggattcgctg
gaggtcaccgtggattttgcctgtagctgcgactgtgaggcaaaagctgtagccaacagc
tccatctgtagcaacggcaatgggacctatgagtgtggcgtgtgtcagtgtcaccaaggg
cgcctgggcccacggtgtgagtgttcagtggaagattacagttcatctaataatgacaac
tgcatcgagaaaccaggaggcccactctgtagcgggagaggtgactgcttgtgtggacag
tgctcctgtcatgcaaatgagtttggtgaggtgtggggcaaatactgccaatgtgatgac
ttcaactgcttgcgcttcaaaggagcactgtgttctgatcatgggaggtgtcgctgtggg
aaatgccattgtgattctaattggaaaggaccaaactgtaactgctccacagtcacagac
acctgcacatccagcattggcatgctgtgcagtggccggggtcactgcgagtgcgggatt
tgtcattgcactgaagttggagcctatggagctacctgtgagaaatgccccacctgtccc
gattcctgcactataaaaaggaagtgtgttgagtgtaaacactttaagagaggacagtac
atcaaagacaacacctgcaatgccgtctgcaaagatgaaattaaagtagtgaatgaactg
gtttttcatgataaaaatgcgaggaattgctcgtacaaagatgagaatgactgcctggtg
cacttccagtattacgaagatgacagtggcaattccatcttgtttgtggtaaaagagcca
gagtgtcctcagggtccagacatcttggtggtgctcatggcagtggcgggagccattctg
ctactgggcctcgttggcttactcatctggaaattgctggtcaccattcatgaccgtaga
gagtttgccaagtttgaggaggagagagccaaagccaaatgggatacggggaacaatcct
ttgtataaaggagccacctccaccttcaccaatgtagcataccgaggcaactaa
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