KEGG   Larimichthys crocea (large yellow croaker): 104926272
Entry
104926272         CDS       T04659                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lco03032]
    104926272 (rif1)
DNA replication proteins [BR:lco03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104926272 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 104926272
NCBI-ProteinID: XP_027146660
LinkDB
Position
XVIII:complement(12707213..12731532)
AA seq 2467 aa
MMAAAGPPSSSGFLPLLESLEDSAAGQSEQTDAYLTIANRLSGEEGRHFLPAVEKHFSRL
GKVTLAHISSSNVELSQAALQALGFCVYHSRVVSAGPETFATEILSTLCSLVVKSTDKNT
CTRALWVISKQSFSPDVVGKKVPAILGTLESVWSREDIQSVVMEHEALNVVIRMLEQVPG
QMGEGAVRWAKLVIPLVVHSASKVRLRAAAAMELGMPLLLEKQMEVAAIIEPMMSSKLIP
ELQKLFMSKNETNVLKLWPLFVKLLGKLLHRGGPFINSLLHLEELGFRSSSPTIKKIAFI
AWKSLIDNFALNPDILCSAKRMKLLMQPLASIHVRTEALLLTKVEVWWYLVVQLGPNLSP
NFDQVSVPLLQCTIGSDSSSVPVTASRPVSQNGASTPSTPKTPFSTSANTSLMSLNSSVH
VPSTFPSIQLLGLEMLLHYFLGAEVIATAAKNKLILSLEPLNHSLLSGASSFTKHAAVLT
SSIRDGFTNVGKEAPDSLLAVIWRNLVQFVNLTIESVGSKKDRQGCEVLTLMLQALQSIV
TSEALPAHKVLILLEATVKGIPHRVLGSASYQVGKMDVLNGTPALFLILLLYDSSLLTAY
IEDERFFQCLQMLVGCGLSGPTSPLAFGEAVLGAMGRSAGFLQNKEQLWKMWSVMVSPLT
DTITQSNEVNQGDALEHNFSAMHSALMFPVTHLLHGTPLQQASQKSMLSSWSKLYKVFAR
CSALVVTAEENICCEEFCARMTAAIDRAALMVPSTLNAVANILQVIVESVDFSPYTPQFQ
QKLKSPHTPVNWMKKRNKVLGNLSTFQSLLVQCLEVYLEGPEVFAEATGLALVFILSALF
TNLALANTIKEALTSLIQPLTLFSKQAASEPPKFTSQLLGKLEKLLLEVLSCLQTRSALA
YDDELLALLSPLLCVLFPHKNKQLRTSVAQFWNSTFANSVSLTYPDEIRPILSQVKQKTP
IILPAFEAVSVPDDLSGQYSSESSQLETKLSGMPVSSVGKRDSLLGKAAELKDRNVTKTS
KPVSTKLDFGSPKPPRREILEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAMYN
NLDASLDTTVFSQYTQSQDDSLDKPPTEQADKVTEDAPGKVLKEDVKNGEDIEVLTKDTQ
DYASPKAIDNMTGNHEQEELIPESADVSMEDDVKSDDRAEDLELQSKEGTSPNISGSSDL
VSGTPQKPNSRRQSFITLEKYSDGKPASPSSASSFTGPLIKTSQERSSASQTSTGPNSQD
SQSTQGGKKNSQCRVNVAPESPQRPKDSGTKCGPVRLTERMPSDTTEDEDVIPDTQTEVE
GKESPEIASTVEELTQSSQEEDSEQNDSQSSLTSSNEPRCRGRPRTRALLPGEDPEKRKK
YKRQRSGEELKSDSSMSSSNRPNTRGRQASEEESGRLRTRAQRDKSESNQTNSQSRARKK
IRLYSKSEEFLDKPEPRRRSTREPESSQTDLRSDTQSDSESQSQSRHRRRSKSSLEAKEA
GMKEKVLPDKEFSQTATDELKEQSEKDDVPKTDSQMITTPPETSGRSQEELVEQAGKDDK
PKRDSEVVTPSLPTSKSQEFELVEQVRKDDEQMDASPHAGSQIQDVEFSKTTGTQEDSQM
VTSPTNHESQDGTSTTMTVNESEVKDEQNGTGEGTDENLSQEDSQVITPSSSDSQSRRRS
RRSKAAESEDKSENKDSSRRQRRSSSQAALSGISHTEATTSGRTRRSKVQEEQSKSSPYS
TPESSQSTPESSQGRGRYSRRISSQGLVANIQSVKSDSPEAKENSPMPQKRGRKPRASLQ
SPLTLESKDKINNDVLTNDSEASQREDAQSIEATNATDLEDSQETQDLEGSESLQVVHSI
EEQSNKESEAVVEKTDSENTQSKSFVMSHRKEEQNQKDSKTDIDNTPLQESNTGDLQCDK
SLESVGTSSEQTQEKLPCDPSAMDTMSSPNETMEKLPASESSEEKAGQMTDPGDDVTEKH
DSDHQEDPVVEEDPVVPAEDGQSTSSGHNQMECSNVLNDFTKEGQQSASIKEGESPYQHT
EASTDADITPLQDSKTQIMECQGEEETSKTQIMECQGEEETRTTNTENGVANVDADLPDV
CNASGFSESTNKDDFQGSPVKQKDLEAVMEPDVGQSPISGRTRGTWSPSASPSTSILKKG
QKRPLEDETPSPLVKSRRVSFANPIQQQETADDIDRRSPAIRTSSPRRSKLSSIPQPKYV
TTPTKGLLILSPRNLHSPGYKSSKKCLISEMGQEPRPVSRDCIYPALVGCSTPVEAVLPQ
ISSNMWSRGFGQLVRARNIKTVGDLSALTPSEIKTLPIRSPKISNVKKALKIYEQQRKGR
GGDELKSFDETEMMTSELEETSAPQNQDEEDKTSETLATELVDEPVPADGRPEQDAPTDQ
TTDMPAREQRAEGLLSEVEALTCRMTPSELSHCSPQQLVQIHHQLGGLMSHVVLELQTRL
CRADAKP
NT seq 7404 nt   +upstreamnt  +downstreamnt
atgatggcggcggcggggcctccgagcagctccggcttcctgcccctgctggaatctttg
gaggacagtgctgccggacagtccgagcagacggacgcttacctcaccatcgccaatcga
ctcagcggagaggaaggccgacattttctccctgcagtggaaaagcacttttctcgtttg
ggtaaagtcaccctggctcacatcagcagttcaaacgtggagctgagccaagctgccctg
caagctctgggcttctgcgtgtaccattctcgcgtcgtctctgcagggcccgaaaccttt
gcaacagagatcctgtcaacactctgctccctggtggtgaagtccacagataagaacacg
tgcaccagagcattatgggtcatctccaagcagagcttctctccagatgtggtcggcaaa
aaagtaccagctatactgggaacactggagagtgtgtggagcagagaggacatccagtct
gtggtgatggagcatgaggccctgaacgtcgtcatcaggatgctggagcaagtcccgggc
cagatgggcgagggagcggtgcggtgggcgaagctcgtcatcccgctggtggtccactcc
gcctccaaggtgcgtctgcgggccgcggcggccatggagctgggcatgcctcttctcctg
gagaaacagatggaggtggccgccatcatcgaacccatgatgtcctcaaaactgatccca
gagctgcagaagcttttcatgtccaagaatgaaaccaacgtcctgaagctgtggccctta
tttgtgaaactgcttgggaagctgctgcacagaggaggtcctttcatcaactccctgctg
catctggaggagctgggtttccgtagttcctctccgaccatcaagaagatcgccttcatc
gcctggaaaagcctcatcgataacttcgccctcaatccagacatcctgtgcagtgccaag
cgtatgaagctcctgatgcagcccctcgcatccatccacgtcaggacagaggccctgctg
ctcaccaaggtggaggtctggtggtatctggttgtccaactcgggcccaacctgtcaccc
aactttgatcaggtgtctgtccctctgctccagtgcaccattggctccgactcctcctca
gtcccggtcactgcttctcgacctgtcagtcaaaacggagccagtacacccagcacaccc
aagactcccttcagcacttcagccaacacgtctctgatgagcctgaactccagcgtgcac
gtgccctccaccttcccctccatccagctgctcggcctggagatgctgcttcactatttt
ctcggagcagaggtgatcgccacggcagccaagaacaaactcatcctgagtctcgagcct
ctgaaccactcactcctctccggtgcttcctctttcaccaaacacgctgctgtgcttacc
tccagcatcagagacggattcaccaatgtcggcaaagaagctccagattctcttctggct
gtcatctggaggaatctggtccaatttgtcaacttgacaatagagtctgtaggcagcaag
aaggaccgtcagggttgtgaagttctgactctgatgcttcaggctctgcagagcatcgtc
acctcagaggctctgcctgcacacaaagtcctgattctgctggaggccacagtgaaaggt
attccccatagagttcttggctctgcctcctatcaagtgggcaaaatggatgtgctcaat
ggaacgccggctctgttcctcatcctcctcctctatgacagcagcctgctcacagcctac
atcgaggacgagaggttttttcagtgccttcagatgctggtaggctgcggcctgtcgggg
cccacttcccctctggcgtttggggaggcggtgctgggggccatgggacgcagcgctggg
tttctacagaacaaggagcagctgtggaagatgtggagcgtgatggtcagcccactgacc
gacaccatcacacagtctaatgaagtgaaccagggtgacgctctggagcacaacttcagt
gccatgcactctgccttgatgttccctgttacacacctgctccacggcacacctctacag
caggcgtcccagaagtccatgctgtcctcatggtccaagctgtacaaagtgtttgcccgc
tgctctgcgcttgtggtcacggctgaagagaacatctgctgcgaggagttctgtgcaagg
atgactgctgcgatcgacagagctgctctgatggttccgtcaacgttaaatgctgttgcc
aatatcctccaagtcatagtggagtctgtggacttctcgccgtacactcctcagtttcag
cagaagctgaagtcacctcacactccagtaaactggatgaagaagaggaataaggtcctg
gggaatctatccaccttccagtccctgctggtacaatgtctagaggtctatctggagggc
ccagaggtttttgctgaagccacagggttggccctggtcttcatcctgtctgctctcttc
accaacctagctctcgcaaacacgatcaaggaagccctgacttctctgattcaaccactc
accctgttctccaaacaagcagccagtgagccgcctaaattcacctcgcagcttctggga
aagttagagaagcttctcctcgaggttctcagctgcctgcagacccgctctgctttggcg
tacgacgatgagctgctggctctgctctctcctctgctctgtgtgttgtttcctcacaaa
aacaagcagctgcgcacctccgttgcccagttctggaactccaccttcgccaactcagtc
agcctcacttaccccgacgagatcagaccaatcctgagccaagtgaagcagaagactcca
atcattcttcctgcttttgaggctgtcagtgttcctgatgacctcagtggacagtattca
agtgagagttcccagttggagaccaagctcagcgggatgccagtttcatctgtggggaag
agggactcactgctgggaaaggctgccgagctaaaggacaggaacgtcacaaagacctcc
aagccagtttctacaaagctggactttggctctcccaagccgcctcgcagagagattttg
gaggaagaggcctccattgactttgttttcatccctccggagacgaaggagagggttttg
acggagcaccagaaggaggtgaaaaggacaaaaagggtcgacatccctgccatgtacaac
aaccttgatgcttctctggatacaacggttttcagccagtacacacagagccaagacgac
tctttggacaaaccgccaactgaacaagctgacaaggttaccgaagatgctcctggcaag
gttcttaaagaagatgtgaaaaatggagaggacattgaagttctaacaaaagatacacaa
gactatgccagcccaaaagcaatagacaacatgacaggaaaccacgagcaggaagagctg
atccctgagtcagcagatgtttctatggaggatgatgtcaagagtgacgatagagcagag
gacttggaattgcagtctaaagaaggcacaagtcccaacatctctggttcttcagatttg
gtctctgggactccccagaaacccaacagtcgccgtcagtcctttatcactctagagaaa
tattctgatggaaagcctgccagccctagcagtgcgtcctcattcacaggtcctctcata
aagacctcccaagaacgttcttcggcttcccagacatccactggtccaaactctcaagat
tcccagtccactcagggaggaaaaaagaactcgcagtgtcgagtgaatgttgcccctgag
tcccctcaaaggccaaaagattctgggactaaatgtgggccagtaaggctgactgagaga
atgcccagtgacacaacggaggatgaagatgttatcccggacacccagaccgaagtggaa
ggaaaagagagtccagaaattgcttccacagtagaggagctgacacagtcaagccaggaa
gaggattctgaacagaatgattctcaatcctctttgacttcttcaaacgagcccagatgt
cgcggacgccccagaaccagagccctgctgcccggagaggaccctgagaaacgcaagaag
tacaaaaggcaacgctctggagaggaacttaaaagtgattcttcaatgtcaagctcaaac
agaccaaacacgagagggaggcaggcttctgaggaagagagtggcagattacgaacaaga
gctcagagggacaagagtgagtcaaaccaaaccaactctcagagtagagctcgcaagaag
atcaggctgtacagcaaatcagaggagttccttgataaacctgaacccagaaggagaagc
acaagagagcctgagtccagccaaactgacttgcggtcagacacacaatctgactctgaa
agtcaatcgcagagtaggcacaggcggcgaagcaaatcatcgttggaggctaaagaggct
ggaatgaaggaaaaggttttgcctgacaaagagttcagccaaactgccacagatgagctc
aaagaacagtctgaaaaggatgatgtgccaaagacagactctcaaatgatcactactcct
cctgaaactagtggtagatcccaggaagaacttgtagaacaggctggaaaagatgataag
ccaaagagagattctgaagtggtcactccttcccttccaacaagtaaatcccaagagttt
gagcttgtagaacaggtcagaaaggatgatgagcaaatggatgcttctcctcacgctggt
agccagatccaagatgtagagtttagcaaaacaaccggaacgcaagaagattctcagatg
gtcacttccccaactaaccatgagtcccaagatggaacaagcacaacaatgactgtgaat
gaatcagaggtcaaagatgaacaaaacggaacaggagaaggtacagatgaaaacttaagt
caagaggactctcaagtaatcacaccctcatcttctgatagccagtctcgacgtaggtcc
agaagaagcaaggcagcggagtctgaagataaaagtgaaaataaggattcatcaagaagg
cagagaaggtctagttcccaggcagcattgtcaggtatcagtcatactgaggccacaact
agtggtaggaccagaaggagcaaggtgcaagaggagcagtcaaagtcaagtccttattca
accccagagagttcccagagtaccccagagtcctcccaaggcaggggcaggtactcgaga
agaatatcttctcaaggattagtagccaatatacagtctgtgaagtccgactcccctgag
gccaaagaaaattccccaatgccccaaaagagagggaggaaacctcgagcatctcttcaa
agtcccctcacccttgaatctaaagacaaaattaataacgatgtattgacaaatgatagt
gaggcttctcaaagggaagatgcacaaagcatagaagctacaaatgcaacagatttagag
gattcacaggaaacccaagatttggagggttcggaatcactgcaggtagttcatagcatt
gaggagcaaagtaacaaagaatctgaggctgttgtagagaaaactgacagtgaaaataca
cagagcaaatcatttgtcatgtcacatcggaaagaggagcaaaaccaaaaggactctaaa
acagacattgataatacccctttacaagaaagtaacaccggggacttgcaatgtgataaa
tcacttgaatcagtggggaccagttctgaacagactcaggagaaattgccctgtgaccca
tctgctatggacacaatgtcgtctcccaatgagacaatggagaaactaccggcctcagag
tcttcagaggaaaaagctggacaaatgactgaccctggtgacgatgttacagaaaaacac
gattcagaccaccaagaagatccagttgtagaagaagacccagttgttccagctgaagat
ggtcagagtacatcttctggacataaccagatggaatgttcaaatgtcttgaatgatttt
acaaaggaggggcagcagtctgcctccatcaaagaaggcgagtctccatatcaacacaca
gaggccagcaccgatgctgacatcacacctctacaagacagcaaaacccagattatggaa
tgtcaaggcgaagaagaaactagcaaaacccagattatggaatgtcaaggcgaagaggaa
actaggacaactaacactgagaacggtgtcgcaaatgtggatgctgacctacctgatgtt
tgtaatgcttcagggttctcagaatctacaaacaaagatgatttccagggttctccggtg
aagcagaaggacctggaggctgtaatggagccagatgttggccaaagccccatcagtggc
aggaccagaggaacctggtctccctcagcctccccatcaaccagtattcttaagaagggc
cagaagagaccactagaggatgagactccctcaccgcttgtcaaatcgaggcgtgtttct
tttgctaatccaatccaacagcaggaaactgcagatgacattgatcgtcgcagcccagct
atcagaaccagctcccccagaagatccaaacttagtagtatcccacagcccaagtatgtc
accactccaacaaaaggcttgctgatcctgagtcccagaaacctgcacagtccaggttac
aagagctccaagaaatgcctgatttctgaaatgggccaagagccgcggcccgtctccaga
gactgcatctacccggccctggttggctgctctacacctgtagaagctgtgctgcctcag
atttcctccaacatgtggtctcgtggcttcgggcagcttgttcgagccagaaacatcaaa
acagtcggtgacctcagcgcccttactcccagtgagatcaagactctgcccatccgctcc
cccaagatctccaatgtcaagaaggcacttaaaatctatgaacaacagcgcaaagggcga
ggtggtgacgagttgaagagttttgatgagaccgagatgatgacctctgaactggaggag
accagtgctcctcaaaaccaggatgaggaggataagacctcagagacactagcaacggag
ctggtggatgagcctgttcctgcagacgggaggccggagcaggacgcccccacagatcag
accactgacatgccggccagagagcagagagctgaagggctgctgtcagaggtggaggct
ctgacctgcaggatgacaccttcagaactcagtcactgctcaccacagcagctcgttcag
atccaccatcagttaggaggcctgatgagccacgtggtgctcgagctgcagacacgactg
tgccgggcggacgccaaaccctga

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