Larimichthys crocea (large yellow croaker): 104926307
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Entry
104926307 CDS
T04659
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03015
mRNA surveillance pathway
lco04261
Adrenergic signaling in cardiomyocytes
lco04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104926307
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104926307
09158 Development and regeneration
04382 Cornified envelope formation
104926307
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104926307
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104926307
03036 Chromosome and associated proteins [BR:
lco03036
]
104926307
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104926307
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104926307
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104926307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
DUF4805
DUF6046
Motif
Other DBs
NCBI-GeneID:
104926307
NCBI-ProteinID:
XP_019111316
LinkDB
All DBs
Position
XVIII:complement(18541269..18561948)
Genome browser
AA seq
581 aa
AA seq
DB search
MPSPQVLQPVLKMKVDELFLNWLSDPATQSLLKDYLDLIKSGQHVDVSSGDSQDLRLLTL
NENNNVASQKNLAEKKAAPFSTPSSPPSTSTLPSGSSSNTRVTGPNGRVLRRSVSTKKAQ
VRTEEPVTTALSASIPKFHFPQGRPQANLNIDSLISKIEKIFSQFPNERATIEDMGQVAK
ACECPLYWKMPLFCSAGGDRTGFVSVHKFVAMWRKTLQTCHDDASKFVHLLAKPGCNYLE
QDDFIPFLQDVVNSHAGLAFLKEAPDFHSRYITTVIQRIFYNVNRSWTGKITCSELRKSN
FLQNVALLDQEEDVNQLTEFFSYEHFYVIYCKFWELDTDHDLYIDQKDLAQHSDQAISQK
MIERIFSGTVTRDRRVYKEGRLSYADFVWFLISEEDKKTDTSIEYWFRCMDLDGDGLLSM
YELEYFYEEQCQKLETMAIEPLPFEDCLCQMLDLVKPEVEGKITLRDLKRCKLSHVFFDT
FFNIEKYLDHEQKDPFSVIREAETDGQEASDWEKYAAEEYDILVAEEAANDQCNDVYDNP
LSPLGQHISTELGLTKRHFFEIPTPHCNLDLDEYEYEDDFE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgccacaagtcctccagcccgttctgaaaatgaaggtggacgagctctttctc
aactggctgagtgatcctgcaacccagtcactgctcaaagattatctggacctgattaaa
agtggacagcacgtcgacgtgagcagcggggacagccaggacttaaggttgttgacctta
aatgagaacaacaatgtggcatcccagaagaacctggcggagaagaaggcagctcccttc
agcactccctccagccctccatctaccagtaccctgccgtctggcagtagcagtaatacc
agagtgaccggacccaatggcagagtactacggaggtctgtcagcacaaaaaaggctcag
gtgaggacggaggagcccgtcaccacagcgctgagtgcgagcattccaaagtttcacttc
ccacagggccggccccaagccaacctcaacattgacagcctcatttccaaaattgagaaa
atattttcccaattcccaaatgaaagggccaccattgaggacatggggcaggttgccaag
gcctgtgagtgtcctctctactggaaaatgccattgttctgctcggctggaggcgacagg
accggcttcgtgtccgttcacaaattcgtggctatgtggagaaaaactctgcagacctgt
cacgatgacgcttctaaatttgtgcacctcttggccaagcctggctgtaattacctggaa
caagacgactttattccattcctgcaggatgtggtgaactcacacgcaggcctggccttt
ctgaaggaggcaccggactttcactcgcgatacatcaccacggtgattcagcggatattc
tacaatgtgaatcggtcgtggactggaaaaataacatgttctgagctcaggaaaagtaac
tttcttcagaacgtggcgttgctggaccaggaagaggacgtgaaccagctgacagagttc
ttctcctacgaacatttctatgtcatctactgcaagttctgggagctggacacagaccat
gacctctacatagaccagaaggacctggcacagcacagtgaccaagccatctcccagaag
atgatcgagagaatattctcaggaacagtaacgagagacagacgggtgtacaaagaaggc
cggctgagttacgctgatttcgtctggttcctcatctccgaggaggacaagaagacggac
accagcatagagtactggttccgctgtatggacctggacggggacgggctgctcagcatg
tacgagctggagtacttctacgaggagcagtgtcagaagctggagaccatggccatcgag
ccccttcccttcgaggactgcctctgccaaatgctcgacctcgtcaagcctgaggtcgaa
ggtaagatcactctgcgggacctgaaaaggtgcaagctgtcccacgtcttcttcgacacg
ttcttcaacatcgagaagtacctggaccacgagcagaaggaccccttctctgtcatacgg
gaggcggagacggacggccaggaggcgtcagactgggagaaatacgcagcagaggagtac
gacatcctcgtggctgaggaggccgccaacgatcagtgcaacgacgtgtacgataatcct
ctgagcccgttaggccagcacatctccaccgagctgggtctgacgaagagacacttcttt
gagatccccaccccacactgcaacctggacctggacgagtacgagtacgaagacgacttt
gaatga
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