Larimichthys crocea (large yellow croaker): 104926417
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Entry
104926417 CDS
T04659
Symbol
plcd3
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00562
Inositol phosphate metabolism
lco01100
Metabolic pathways
lco04020
Calcium signaling pathway
lco04070
Phosphatidylinositol signaling system
Module
lco_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
104926417 (plcd3)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104926417 (plcd3)
04070 Phosphatidylinositol signaling system
104926417 (plcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104926417 (plcd3)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
104926417 (plcd3)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
104926417 (plcd3)
Endocytosis
Macropinocytosis
Phospholipase C
104926417 (plcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_10
EF-hand_like
C2
EF-hand_7
EF-hand_6
EF-hand_1
PH
EF-hand_5
PH_12
FCaBP_EF-hand
SPARC_Ca_bdg
TEP1_N
EF-hand_PLCG2
Motif
Other DBs
NCBI-GeneID:
104926417
NCBI-ProteinID:
XP_010738576
LinkDB
All DBs
Position
XII:complement(6541706..6561051)
Genome browser
AA seq
786 aa
AA seq
DB search
MLGSGKSPATSPREERSKVAEKTVDLSRRVGLDNEDIRMMMQGTNMVKVRSPRWQKSRNL
RLLEDGLTVWCESTKRSRKAKSQQTFAVTEVECVREGCKSEALKCLSGTAQDNQCFTVVF
RGSRKSLDLLCPCEEEARRWVRGLRTLKEHVANMTQKEKLDHWIRGYLKRADQNQDGKMS
YDEVKRLLQMINIDLSEQYARNLFKKCDRSGDGRLDHIEIEEFCRELLRRPELDSVFRHY
SSNGCVLATAELRDFLGDQGEDASLNHAQSLILTYELNEWAQKNLFMTQNGFTMYMLSRE
NDVVNPNHALVYQDMTHPLSHYFISSSHNTYLTKDQVTSASSTEPYIRALIQGCRCVELD
CWDGDKGEPVIYHGHTLTSKVPFKEVIETINQYAFRASPYPLILSLENHCSVEQQAVMAK
HLRTILGNKLLIKPQPLKDLPSPEELKGCILVKGKKQIPHLSQLGKNGSCASFSSSSEDE
LANSNKNTSKKDPAKVCSKLSPELSELVVYCKSVPFRGFDNLSEKPPDEMSSFSESDALK
LIKDSGKLFVRHNSRQLSRIYPSGQRLQSSNYDPQEMWNGGCQMVALNFQTPGEQMDLNQ
GRFLTNGRCGYVLKPSFLCSPTSNFNPENTGGGPGHVPTQLTIRIISAQQLPKINTEKAS
SIVDPQVWVEIHGVAIDNARDKTQRIDNNGFNPRWNCTLSFQLQVPDLALVRFVVEDHDH
TAKNDFVGQFTLPFTSLRAGYRHVHLLKADGSSLSPATLFIHVKVSRKGVPVKSVSERMA
IARGKQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagggagcgggaagtcaccggccaccagtcccagggaggagaggagtaaagtggct
gagaagaccgtggacctcagcagaagagtcgggctggacaatgaggacatacgaatgatg
atgcagggcaccaacatggtgaaagttcgctctccgaggtggcagaaaagccgaaacctt
cgtctcctggaggacggtctgaccgtgtggtgtgaatccaccaagagatcccgcaaagcc
aaatcccagcaaacattcgcagtgacagaagtggagtgcgtgcgggaaggctgtaaatcc
gaagcgctgaagtgtctgtctgggacggcgcaggataaccagtgcttcacggtggtcttc
agaggatccaggaagagcctggacctgttgtgcccctgtgaggaggaagctcggcgctgg
gttcgaggactccgcactttaaaggagcacgtggccaacatgactcagaaggaaaaactg
gaccattggatccgaggctacctgaagcgagcggatcagaaccaggacggcaagatgagt
tatgatgaggtcaaacggctgctgcagatgatcaacattgacctgagcgagcagtacgcc
cgcaatttattcaagaagtgtgatcggtccggtgatggtcgtctggatcatatagagatt
gaggagttctgcagggagctgctgaggcgacccgagctggactcagtgttcagacactat
tccagtaatggttgcgtgctcgcaactgctgagctgcgtgacttcctgggagatcaagga
gaagacgcctcattgaatcatgctcagagcctcatactcacctatgagctcaatgagtgg
gctcagaaaaacctgttcatgacccagaatggtttcaccatgtacatgctgtcccgggag
aacgatgtggtaaaccctaaccacgctctagtctaccaggatatgacccatccattgtcc
cactacttcatctcctcgtcgcacaacacttaccttaccaaggaccaagttaccagtgcc
agcagcactgagccatacatcagggctctgatacagggctgtcgctgtgtggagctggac
tgctgggatggagataaaggtgaacccgtcatctaccacggccacactctcacctccaaa
gtgcctttcaaggaggtcattgaaaccatcaaccagtacgccttcagggcatccccatac
cctctaattctgtccttggagaaccactgttctgtggagcagcaggctgtcatggccaaa
cacctccgtaccatcctgggcaacaaactgctcatcaagccccagcctctaaaggatctg
ccttctcctgaggagttaaaggggtgtattctggtaaaaggcaagaagcagattcctcat
ctgagccagctgggcaagaatggcagctgtgccagcttctcctcgagctctgaggatgaa
ctagcaaacagcaataagaacacatctaagaaagatcctgcaaaggtctgttctaaactg
agcccagagctatcagagctggtggtgtactgcaagagtgtccccttccgtggatttgac
aatttatctgaaaaaccaccagatgaaatgtcctccttctctgaaagtgatgcccttaag
ctcatcaaagactcgggaaagctttttgtgagacacaacagcaggcagctgagccggatc
tacccctccggccagcgcctccaatcatccaactatgatcctcaggaaatgtggaacggt
ggctgccagatggtggctctgaacttccagacacccggggagcaaatggacttgaaccag
ggtcgcttccttaccaacggtcgctgtggatacgtcctcaaaccgagcttcctgtgcagc
cccacgtccaactttaacccagagaacacaggaggagggcctggtcacgtccccactcag
ctgactatacggattatatctgcgcagcagctgccaaaaatcaacacagagaaggctagc
tccatcgtggaccctcaagtgtgggtggaaattcacggggtggctattgacaatgcaaga
gacaaaacacagcgcattgacaacaatggctttaacccacgatggaactgcactctgagc
ttccagctgcaggtcccagatctggccctggttcggtttgtagtggaggaccacgatcac
actgccaaaaatgactttgtggggcagttcactctacctttcacaagcctacgagcaggg
tatcgacatgttcacttattgaaggcagacggttccagtctgtcccccgccacactcttc
atccatgtcaaagtgagccgtaaaggagttcccgtcaaaagtgtgtccgagcgtatggcc
atcgccagaggcaaacaatga
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