Larimichthys crocea (large yellow croaker): 104926469
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Entry
104926469 CDS
T04659
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104926469 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104926469 (nup54)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104926469 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
104926469
NCBI-ProteinID:
XP_019109241
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Position
IX:complement(11602081..11611353)
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AA seq
587 aa
AA seq
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MITAESREEEEALTVNMAFSFGGATSNTAANTSGFTFGSFGAKTTASTAFGFGAAATTTT
AASSSGFGTLTAPGFGAATTTAAAPATGFSFGSTNTGTFGGFGTTTTAATAPGSTFSFAA
PANTTGGLFGNTQNKGFGFSSGLGTGTATGTAGFGTGLGTTGLGGFGGFNIQPTQQQQGG
LFSQQAQQLGQAQPTQLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNP
PADFTQENPFCRFKAVGYSCVPVSKDEDGLVVLVLVKKEADVRAQQQQLVESLHKILGSN
QTLTVNVDGVKALPNDQTEVIVYVVERSPNGTSKRIPATTLFSYLEQANIKAQLTQIGVA
MSVTRTELSPAQLKHLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQ
EQMTKQHQTRVDIISSDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSG
YAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLL
REIKQHLKQQQEGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgataacggctgagtctcgagaggaagaagaagcgctaacggtcaacatggcgttcagt
tttggcggcgccacgagtaacacagcagcaaacacgtccgggtttacattcggttcattt
ggtgccaaaaccacagcatccacagcatttggctttggcgccgcagccaccaccaccacc
gccgcctcctcgtccggattcggcactctcacagctcctggttttggggcagccaccacc
actgctgctgcaccagccacaggatttagttttggctccacaaacactggcacgttcggt
ggctttgggacgactacaacagctgccactgcacctggatccacttttagcttcgctgct
cccgccaacaccacaggaggcctctttggtaacacacagaacaaagggtttgggttttcc
tctgggcttggcactggaaccgctacagggacagcaggatttggaactggattaggaaca
actggcctgggtgggtttggaggctttaatatccaaccaacacagcagcagcaaggaggt
ttgtttagccagcaggcccagcaactgggtcaggctcaacccacacagctttaccagcag
gtcactgctctctcagcacccaccttgctgggagacgagcgcgactccattttagccaaa
tggaaccagctgcaggcttactggggcactggaaaggggtactacagcaacaacaacccg
cctgccgactttacccaagagaacccattctgcaggttcaaggcggtgggctacagctgc
gtcccagtgagtaaggatgaagatggtttagtggtcttggttcttgttaaaaaggaagct
gatgtgcgggctcagcagcagcagcttgtggagtccctccacaagatcctgggaagcaac
cagacactcactgtcaatgtagatggtgtcaaagccctgcctaatgaccagacagaggtg
atcgtttatgtggtggagcgctctcctaatggcacctccaagcgaatccctgccaccaca
ctcttcagttacctggagcaggccaacatcaaggcccagctcacacagattggagtggcg
atgtccgtcacacgcacagagctgtccccagcacagctcaaacacctgctgcaaaatgca
cctgcaggagtggaccccatcatctgggaacaggctaaagtggacaaccctgacccagaa
aaattaatcccagttcccatggtgggttttaaggagctgcttcgcaggctgcagatccag
gagcagatgaccaaacagcaccagaccagagtggacattatctccagtgatatcagtgaa
ctgcagaagaaccaggcgaccacagtggccaagatagctcagtacaagaggaagctgatg
gatctctctcacagagtgctgcaggtactgatcaaacaggagattcagagaaaaagcggt
tatgctatccaagtggatgaagagcatctccgggtgcaactggacaccattcagtctgaa
ctcaatgcccctacacagttcaagggtcggttgaatgaattaatgtcccaaatccggatg
cagaatcattttggagccgtgagatcagaagagcgctacagtgttgacgcagaccttctc
agagaaatcaaacaacacttgaaacagcagcaggagggtttaagtcatttgatcagcgtc
atcaaagacgacctagaggacatcaaactcatagagcatgggctgagtgacagtggacac
atgagaggaggcatcctgagctga
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