Larimichthys crocea (large yellow croaker): 104926509
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Entry
104926509 CDS
T04659
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X2
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
lco04148
Efferocytosis
lco04218
Cellular senescence
lco04310
Wnt signaling pathway
lco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104926509
04310 Wnt signaling pathway
104926509
04020 Calcium signaling pathway
104926509
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104926509
09143 Cell growth and death
04218 Cellular senescence
104926509
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104926509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104926509
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
104926509
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
104926509
NCBI-ProteinID:
XP_010738681
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Position
XIII:24947152..25006039
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AA seq
923 aa
AA seq
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MSFQHEEQEFDFSYVFEYSQDVQKEPETDAYSYTPNVSLSLPLGMGNPCLATQYHTLQSS
PVISVSSCHQTGYSLQNDNHAPSNYYLPHGLRPNGAPALESPRIEITAYSQYPEDEVEES
NSEDHIIKRGVNSIVTLTLPNADGYRDPSCLSPASSISSRSCNSEASSYESSFYNYDNSP
QNSPWQSPCVSPRGSSSLLSCPHASGPAASPHHSPSTSPQIGAVAEEGWPAQPRGSRPNS
PSCSGGSGGSGGNGGGGGGGGGGMGKRKYSFNGTYRQTSCSPIQSPTPSPHGSPRVSITD
DNWLANTNQYTNSAIVAAINALTTDGVVDMGEGIPIKTRKTMLDHSSSMSLKVEPGGELL
CPDGELCHEDYPSRLALKKENYCGGFLDVPQHPYSWSKPKPYLSPSLPALDWQLPSCSGP
YNLQIEVQPKSHHRAHYETEGSRGAVKALSGGHPVVQLYGYMESEPLTLQLFIGTADDRL
LRPHAFYQVHRITGKTVSTASHEVMQSNTKILEIPLLPENNMRAIIDCAGILKLRNSDIE
LRKGETDIGRKNTRVRLVFRVHINQPNGRTVSLQTTSNPIECSQRSAQELPLVEKQSLDS
YSVTGGKMMLLSGLNFLPDSKVVFVEKAQDGHHLWETEAKVDKNSVKSSSIVVEIPPYRN
QRIPSPVQVNFYVCNGKRKRSQYQRFTYLPPNVPIIKTEPNDEYDSLGTARLPMRSKPYY
NQPRLTPIMPVADPDACLVGGYPPCPPRHAAIPSTPPSSSPTLHDLSPVAYSKCLPNSPT
HAAPPGPVVPPIQENPGCPNLAHPASPDHNSSLGMLHSQGSPNHLNSPGPHGYHPIYANS
SPSSSPVSLPSTPGCTAESPFVQAYSPSQAAASSPSLVPEDASPPSMAITVKQEPQELDQ
MYLDDVNEIIRNDLSSISVHTHA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccagcatgaagagcaagagtttgatttcagctatgtgtttgagtacagccaa
gatgtccagaaagaacctgagacagatgcatacagctacacaccaaatgtcagcttgtcc
cttccactgggtatgggcaacccctgtctggccacccagtaccacaccttacagtccagc
ccagttatttcagtttcctcttgccaccaaacaggctacagcctgcagaatgataaccat
gcaccatcaaactattacctgccccatggcctgagacccaatggggccccagctctggaa
agccctcgtattgagatcactgcctacagccagtatcctgaagatgaggtggaagagagc
aacagtgaggaccacatcatcaaacgaggcgttaactctattgtgacgctgacactaccc
aatgctgatggctaccgtgatcccagctgtctcagccccgcaagtagcatttcctctcgt
agctgtaactccgaggcgtcctcctatgaatccagcttctacaactacgacaactcccca
cagaactccccctggcagtctccctgcgtttctcccagaggctcatcctccctcctgtcc
tgcccacatgctagcggccctgcagcttcccctcaccattcaccctccacctcccctcag
ataggagcagtggccgaggaaggctggccagcacaacctcgtggctccaggcctaactct
ccttcctgcagcggaggcagtggaggcagcggaggcaatggcggcggcggcggtggaggc
ggcggcggcatggggaagagaaagtacagcttcaatggcacctaccgtcagacatcctgc
tcccccatccagtcacccaccccatccccacatggctcacccagggttagcatcacagat
gacaactggctcgctaacaccaaccaatacaccaactctgccattgtggctgccatcaac
gccctaaccacagatggagtggtagacatgggggaaggaatcccaatcaagactcggaaa
accatgctagaccactcatcttccatgagcttaaaggtggagcctggtggtgaattgcta
tgtcctgatggagagctctgccatgaggactacccctcccgcctggccctcaaaaaggag
aactattgtggagggttcctggatgtgccccagcatccgtactcctggtctaaacccaag
ccttacctcagcccatctctgccagctcttgactggcagcttccatcctgctccggcccg
tacaacctacagatcgaggtgcagccaaagtcccaccacagggcccactatgagactgaa
ggcagccgaggggcggtgaaggcgctgtctggtggccaccctgtagtacagctttatggc
tacatggaaagcgagccgctcaccctgcagctgttcatagggaccgcagacgaccgcctc
ctgcgaccacatgccttctaccaggtccaccgcatcaccggcaaaaccgtctccaccgcc
agccatgaagtcatgcaatccaacaccaaaattctggagatccctctgctgcctgaaaac
aacatgagagccataattgattgtgcagggatcctgaagctgcgtaattccgacattgag
cttcgcaaaggggaaacagacatcggacgtaagaacacgcgtgtaagattggtgtttcga
gtgcacatcaaccagcccaacggcaggacagtgtccctacagactacttcaaaccccatt
gaatgctcccagcgctcagctcaggagcttcccttggtggagaagcagagtttagatagt
tactctgtcactggaggcaaaatgatgctcttgagtggcctcaacttcctccccgactcc
aaggtggtgtttgtggagaaggctcaggatggacatcatctgtgggagacggaagccaaa
gttgacaagaactccgtcaaatctagctctattgttgtggagatcccgccctacaggaac
cagagaatacccagcccggtgcaggttaacttctacgtctgcaatggcaaaaggaagagg
agccagtaccagcgcttcacctacctgcctcctaatgtgccgataataaagacagaaccc
aatgatgaatatgattctctggggactgcaagactgcccatgcgttcaaagccctattac
aaccagcccaggctgactcccatcatgcctgtagccgatccagatgcctgcctggttggt
ggctaccctccctgcccacctcgccatgccgccataccatcgacgccccccagctccagc
cccaccctgcatgacctctccccagtggcatacagcaagtgcctccccaacagccccact
catgcagcaccaccaggccccgtggtgccccccatccaggagaatcctggctgccccaac
ctcgcccaccctgcatcgccagaccacaactcttccctagggatgctccattcccagggc
agccccaaccacctcaacagcccagggccccatggttaccaccctatctatgccaacagc
agtccctcatcctccccagtatccctcccttccacccccggttgcactgcggagagcccg
tttgttcaggcctacagccccagtcaggcagcagccagctcacccagcctggtacctgag
gatgccagccccccttcgatggccatcaccgtcaaacaggagccccaggaactggaccag
atgtacctagatgatgttaatgagatcatcaggaacgacctctccagcatttccgtgcac
actcacgcatag
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