Larimichthys crocea (large yellow croaker): 104926565
Help
Entry
104926565 CDS
T04659
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03272
Virion - Hepatitis viruses
lco04382
Cornified envelope formation
lco04514
Cell adhesion molecule (CAM) interaction
lco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
104926565
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104926565
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104926565
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104926565
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104926565
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104926565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
WLS-like_TM
Oxidored_q3
7tm_3
Wzy_C_2
DUF4407
DUF996
Motif
Other DBs
NCBI-GeneID:
104926565
NCBI-ProteinID:
XP_010738744
LinkDB
All DBs
Position
XII:complement(10568642..10579217)
Genome browser
AA seq
481 aa
AA seq
DB search
MPNNKHNPPPYQPNGSKHHSSRHRHSELMSNPAFSYYPGEKMLHFYRWSSPPGVMKILCI
IIIIMCVAVFACVASTLAWDYDMSLMGLGGGASLLPGYGYGGSYGGSYGSSYGGSYGSSY
IGGTGGGGTYGYGGTQMDPKSGKGFIIAIAAITFIAVLIIFVLVVSRQNAARSPKFYLAT
IIICAILAVLMIIATIVYLVAVNPTAQSTGSVYYSQIRQLCAQYQNQDQAQGIFLNQYLY
HYCVVEPQEAIAIVLGFLVFVGLIILLVFAVKTRSKIRHWGRDRILWEEVKVINDGLHNS
IGEWVNNVSGDPEVLVNDPNYKIGGSRDYVNHLDHSKPLYLPGDSEISSSVGGLKPRLKD
YDTGVESGDDLEEEDFSILFPSIVDEQERLNYKREFDQDHQEYKNLQAELDSINQDLADL
DEELGRHPEGSPQFLDAMDEFTRLKHLKKSPSYEIKKKRCKYLRSRLSHIKRKISEYDRR
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacaacaagcacaaccctccaccctaccaaccgaatggtagcaaacaccacagc
agcagacacaggcacagtgagcttatgtccaatccagccttttcgtactacccaggagag
aaaatgcttcacttctatcgttggtcttcaccaccgggtgtgatgaagatattgtgtatc
atcatcatcatcatgtgtgtggctgtgtttgcctgtgtggcctccacgctagcctgggac
tatgatatgagcctcatgggtctgggcggtggagctagtttgttaccaggttatggttat
ggtggctcatacggtggttcatacggtagctcttatggcggcagttatggcagctcttat
ataggcggcactggtggtggtggtacttatggctatggaggaacacaaatggatcccaaa
tctggcaaaggcttcatcatcgccattgcagccattactttcattgctgtgctcatcata
tttgtgttggttgtttcgaggcaaaatgctgcccgctcaccaaagttctacctagcaacc
atcatcatctgtgccatcttggcagtcctgatgatcattgccactattgtgtacctggta
gcagtgaacccaacagcccaatccacagggtctgtgtactacagccagatccgccagctg
tgtgcgcagtaccagaaccaggaccaggcccagggcatcttcctgaaccagtacctgtac
cattactgtgtggtggaacctcaagaggccatagctattgtccttggtttcctggtgttc
gttggcctcatcatcctgctagtgtttgcagtcaagactcgctccaagatcaggcactgg
ggccgagatcgtatcctctgggaagaagtgaaggtcatcaacgatggtctgcacaacagc
attggggagtgggtaaataatgtatctggtgacccagaggtgctagtgaatgaccctaat
tacaaaattggggggtccagagactatgtgaaccatctggaccacagcaagcctctctac
ctgccaggagactccgaaatcagcagctctgtgggaggtctgaagcccagactgaaggac
tatgacactggagtggagtctggagatgacctggaggaggaggacttcagcattttgttc
ccctcaattgtggatgagcaagaacgtctgaactacaaacgtgaatttgaccaggatcac
caagagtacaagaatctgcaggcagagctggacagcataaaccaggacctggctgacctg
gacgaagagctgggccgacaccctgagggcagtccacagttcctagatgccatggatgaa
ttcactagactgaagcatctaaagaagtcccccagctacgagattaagaagaagaggtgt
aaatatctcaggtccagactgtcacacatcaaaaggaagatcagtgaatatgaccgtcgg
ccttga
DBGET
integrated database retrieval system
