KEGG   Larimichthys crocea (large yellow croaker): 104926587
Entry
104926587         CDS       T04659                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104926587
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lco01009]
    104926587
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lco03021]
    104926587
Protein phosphatases and associated proteins [BR:lco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104926587
Transcription machinery [BR:lco03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     104926587
    Little elongation complex (LEC)
     104926587
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N A_deaminase_N
Other DBs
NCBI-GeneID: 104926587
NCBI-ProteinID: XP_027130944
LinkDB
Position
XXIV:6314777..6324004
AA seq 623 aa
MSALREQQCYGLSSGKLSRGGDNISVFHVKLTDSAARAIGSYQTCKGLSSHPTICFNGNQ
GRVTIPCSENRDNLRIFTFGVTNVARNNPHGSFDCVQQLNTGAAEELSCLGVIQKKMTVN
ATDDSYDKARQSMAQAEEETRSRGAIVIKHGGRYQGKKVTVRAPAPALAGLTKPRQSHPL
LSKIKREVVGMSKPKKGACASNRKSVGNMQERPLRERVTHLLALRPYKRPELILRLQNDG
LTAADKDVLDSVLMEVGQLNSRDKTFVLKDGLYKELQKDWPGYTSGDQQLLKRILVRRLP
QANLLTVPEAQVSPLRDTPNSSPAHRPKPSLPEEYTDPLLSKKPRISHLSNKTASDKPSA
RPPKQAAHKDVTEAKGNDGQSNSLDPRKLFDSLSAVCQRDVEAVERLEPTGRAAEEPKGT
ADHPQPNSERSPSPLIVPDLNRHTVKRKKSKHKHRDQEKDGWRDRKERRKDRSSEDPKSK
VSLDCTETNEILFEANVLKESSDATDYLSTYTGIRSHDQRQSYKQDFNREYSEYRDLHAR
IDGVTRQFMELDTQLKRLHHESHKYKTVHNQILQEYRKIKKSNPNYNQDKSRCEYLHNKL
AHIKKLISEYDQQQLSVDHSSHN
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgtctgcgctcagggagcagcagtgttacggactgtccagcggtaaactgagccgcggc
ggcgacaacatctccgtttttcacgtcaaactcactgacagcgcggcaagagccatcggc
tcctaccagacctgcaagggtttgtcttcacatcccacgatctgttttaatggaaaccaa
gggagagtcactatcccttgctcggagaacagagacaacctgaggatattcaccttcggt
gtgaccaacgtcgcccgcaacaatccacacgggagctttgactgcgtccaacagctcaac
actggtgctgccgaggagctgtcatgtctcggggtgattcagaagaagatgacagtcaac
gctacagatgactcgtacgataaggctcgtcagagcatggcccaggccgaggaggagaca
cgcagccggggggccattgtcatcaaacacggggggcgctaccagggcaagaaggtaacg
gtgcgagcgccggcgcccgcgctcgccggcctgaccaagccgagacaatcccaccctctc
ctcagcaaaatcaaaagggaggtcgtcggcatgtccaagccgaagaaaggcgcctgtgct
tcaaacaggaagagcgttggcaacatgcaggagaggccgctcagggagagagtgacacac
ctgctggctctgaggccgtacaagaggcctgagctgatcctgaggctgcagaatgacgga
ctgacagcagcagacaaggacgtgctggactctgtactgatggaggttggccaactcaat
agcagagacaagacatttgtcctgaaggacggtctgtataaggagctgcagaaggactgg
ccaggctacacctcgggagaccagcagcttctcaaacgaatccttgtcaggagactgcca
caggcgaacctcctcaccgtcccagaggcccaagtcagtccactgcgagacacccccaac
tcctccccagcacaccgtccaaaaccctccctgccagaggagtacactgaccctctgttg
agtaagaagcccaggatatcccacctgtccaacaaaacagccagcgacaagccaagcgcg
aggccgcccaaacaagcggctcataaagacgtcacggaagcgaaggggaacgacgggcaa
agcaactcgcttgatcctagaaagctttttgactccttgtcggcagtctgtcagcgcgac
gtagaagcggtcgagaggcttgaaccaaccggccgtgctgcggaggagcccaaaggcaca
gcggaccacccgcaacccaactctgagcgctctccgtccccgctgatagtgccggatctg
aacagacacacagtgaaaaggaagaagagcaaacacaaacacagagatcaggagaaggac
gggtggagagacaggaaagaaaggagaaaagatcgcagttcagaggatccaaagagcaaa
gtctctctggactgcacagagacaaatgaaattttgtttgaagctaatgtgcttaaagag
agcagcgacgcaacagactatctatcgacgtatacggggattcgtagtcatgaccagaga
cagagctacaagcaggactttaacagggagtacagcgagtacagagatttacacgctcgt
atcgacggcgtgacacggcagttcatggagctggacacgcagcttaaacggctacaccac
gaatcacacaagtacaagacggttcataatcaaattcttcaagaatatcgcaaaattaag
aagtccaaccccaactacaaccaggacaagagtcgctgtgaatatctccacaacaaactg
gctcacatcaagaagctcatatcggagtacgaccaacaacaactcagcgtggatcattcg
agtcacaactga

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