Larimichthys crocea (large yellow croaker): 104926709
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Entry
104926709 CDS
T04659
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104926709
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104926709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104926709
Spliceosome [BR:
lco03041
]
Common components
Common spliceosomal components
SR proteins
104926709
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
104926709
NCBI-ProteinID:
XP_010738925
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All DBs
Position
XI:complement(5960598..5967340)
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AA seq
295 aa
AA seq
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MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKKGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGAGGGGGRFSDRYGRGSQSSRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKVNEGVVEFASYSDLKNALEKLSGKEMNGRKI
KLIEAAKKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAKAHNRSRSRSGSPAGGAS
SPTAKSKEPAKRSSKTSKSATPPSPLPAQRASVSRSRSRSRSRSRSRSPSTDSQR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtattttcatcggtcgtctgagcccctctgcccgagagaaggatgtg
gagaggttcttcaaagggtacggccgcatccgagacatcgacctcaagaagggtttcggc
tttgtggagtttgacgaccccagagatgccgaggatgctgtttatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccatcgagcacgctcgtgtacgcctgcgaggtggccgc
ggcagaggagccggtggcggtggaggacgtttctctgatcgctatggccgaggctcccag
agcagtcggagtcgaaaccctcctccgatgcgcactgagaaccgactgatcgtggagaac
ttgtcctctcgtgtcagctggcaggacctgaaagatttcatgagacaagctggagaggtg
acatttgcagacgcacatcgccccaaagtcaacgaaggggttgttgagtttgcctcttac
agtgatctgaaaaacgcccttgagaaactgtctggaaaggaaatgaatggcaggaaaatc
aagctcattgaggcagccaagaagaggtcgagaagtcgttcccggtctgagagctcctct
cgctcgcggtcccgttctcgcggtcgctctccgtctcgttcccccagacgttcccgcagc
cccgccaaagcccacaaccgttcccgctctcgctccggctcccctgccggcggcgcctcc
tccccgaccgccaagtcgaaggagcccgcaaagcgttcctccaaaacgagcaagtccgcc
actccgccctcccctctaccggctcagagggcctccgtctcccgttcccgctcacgctcc
cgctctcgttcccgctctcgctctccttccaccgacagccagcgttaa
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