Larimichthys crocea (large yellow croaker): 104926971
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Entry
104926971 CDS
T04659
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104926971
03036 Chromosome and associated proteins [BR:
lco03036
]
104926971
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104926971
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104926971
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104926971
UBL E3 ligases
104926971
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
104926971
Cilium and associated proteins [BR:
lco03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104926971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104926971
NCBI-ProteinID:
XP_010739243
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All DBs
Position
X:3282508..3285305
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AA seq
442 aa
AA seq
DB search
MCLRGSEIMSAIKVALQQSQKRGRRKTSEAMSAEVSPDSKCPXCLDMFNNIXYLDLCLHK
FCFRCFTSGSKNKAECPLCKQPFNSIYHSIKSEQDFKKFDLRPIENGSFGTFEGVRFRYR
TTLTGVHRQMQRRTXPPPDQRVVMFEATTNAPEQPQDRYIXALMMRLAAKRRAASEGRAV
NXVREQEMINFRRSVYRRGVRVRNVRDGGRXRDTSADFFRRXPACLHRLIPWLKRELVVL
YGAHGSLVNIVQHIIMSAITRYDMEDGAIQEELRPFLQGRTEHFLPEFISFASLPSTWXA
YDQHAVYDCPAPSSNEDSSSNSSVIASQDEEGSMDAPETPRLLXARAVWDDETPGPSXST
NAEQIVRVPLRPRLDSDSSLEEEAQPFGACPQPMSPLNQTNVTDGGVNKEECCPLTAMVC
DCGFVKPXADRTPELVKLSSDS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgcgggggtctgagatcatgtcagcaatcaaggttgccctgcagcagagccag
aagaggggcaggaggaaaacctctgaagcaatgtctgcagaggtttcgccagactccaag
tgtccantctgtctggacatgttcaacaacattntctacctggacctctgcctgcacaag
ttctgtttccggtgtttcacgagtggttccaagaacaaagccgagtgccctctatgcaaa
cagccattcaattcaatctatcacagcataaaatcagagcaggacttcaagaagtttgac
ctgcggccgatagagaatggctcttttgggacttttgagggagtgcggtttagataccgc
acgactcttacaggagtccaccgacaaatgcagaggaggactnctcctcctccagaccaa
cgagtagtaatgtttgaagccacaacaaacgctcccgaacagccacaggaccgctacatc
ncggcgttgatgatgaggttggcagccaagagaagagctgcgagcgaagggagggcagtg
aacnacgtcagagagcaggagatgatcaacttcaggaggagcgtgtaccgacggggggtg
agggtgaggaatgtccgcgatggtggccgcntccgagacacttcagctgacttcttccga
aganaacctgcctgcctacatagactgatcccctggctaaaaagagagctggttgtgcta
tacggggcccacggctctttggtcaacatagttcagcacatcatcatgtccgcgattaca
cgttatgacatggaggatggagctattcaggaagagctcaggccattcctccaggggcgc
acagagcactttcttcccgagttcatcagctttgcaagtctcccttcaacatggnnagcc
tatgaccagcatgctgtctatgactgcccagccccgtcctcaaatgaagacagcagctcc
aactcatctgtaatagcttctcaggatgaggagggctccatggacgcccccgagactcca
cgtctactctgagccagggcggtgtgggacgatgagacacctgggccatcataatctacg
aacgcagagcagatcgtcagagtgcctctccgtcctcgactcgactcagacagcagttta
gaggaggaggcccaaccgtttggagcttgtccacagccaatgagtcctcttaaccaaaca
aacgtgactgatggtggagttaacaaagaagagtgttgtcctctgacagcgatggtgtgt
gattgtgggtttgtcaagccanacgcagacagaactcctgagctggttaagctctcctct
gactcttga
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