Larimichthys crocea (large yellow croaker): 104927029
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Entry
104927029 CDS
T04659
Symbol
ankrd27
Name
(RefSeq) ankyrin repeat domain-containing protein 27 isoform X1
KO
K20175
ankyrin repeat domain-containing protein 27
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104927029 (ankrd27)
Membrane trafficking [BR:
lco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104927029 (ankrd27)
Others
Specific organelles associated proteins
Melanosome
104927029 (ankrd27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
VPS9
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
104927029
NCBI-ProteinID:
XP_019135140
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All DBs
Position
XXI:2854566..2884012
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AA seq
1190 aa
AA seq
DB search
MKLVSEQSDGDPDFQLLMAVYDENILKNPFYLALEKQRPDLCSRVAEIHGIVLVPCCGSL
AVSSYSDSQFENYVLQPLEDGYQTVDGKEVRIQDRQVLLGSGFPAPASIPILFDETFYND
QEQSYSILCISRPFEVEPSPGELSPPPPYCLKSLEEVREFLGRHAQKLDKFIHGFCQAFK
EQERKGLRHHIDSVNGLYTKCLQCLLRDSRLKLLAKQELQMTLLKQAVEMYVHHGIHDLI
FNFVGTLEASQDAAFNKTSRSLQELQQKDLGVKPEFSINLSRAKRELSQLNQQTSPLLKL
FCLRRVALTATQTPRRTVSIEAVCADDLLSVVLYLLVKTEIPNWMANLSYIRNFCFSHSS
KDELSYCLSTFEAAVEYINLGKLQDTGSGELNDKALFKERMSLLYQSAATPIHCLFEHIA
NGNEVEVERLLSEGENNEDVKMCHPLCSCDICDLQLSGRLNDPSIVTPFSRDDRGYTPLH
VAAVCGQSQLIDLLVCKGAPVNATDYHALTPLHLACQRGYQGVTLLLLHYKANTDAQDNN
GNTPLHLACMYGHEDCVKALVYYDVQTCRLDLQNDKGDTALHMAARWGYEGIIQVLLENG
ASTDILNKSKDSPLQCALNSKILMLLQSTQNGRQRSGSGVDSPSRSPLASDCSSRRSSIS
STSSLGSEAKPEGERVRHREVEKLLRAVADGDVEMVRYLLEWMDEEEEDEGELRSEALLC
HPLCQCPNCAPTQKLSVLQAGALGVNSCNIDGFTPLHVAALHGHSALAALLIRHGANVNA
RTNQSATPLHLATQNSHVQVVRFLLECNAKLNKKDHYGNTPLIHACLCGNLETATTLLQS
NALVNVANLQGNTALHEAVRGGHQALVELLLRGGALPGIRNKRQRTALDCAYELGGKNTE
ILRALQKASGLSPDDEPIKLLSVPKGALAHSFVQRLRLQDHANGRRQKLAISRIQQMKKG
SSGPPPRSLSPNQVNPDRRRLRRGETVEVSSPSASLNAGPRLRERPLGRCHTLDSGEQTP
EQPEPSHTPDTTEQTPPESNQTHTPSDSPPSVGVQMSTDVDDTQADTSQTHSTDDCSTGS
ETPPSSPSNALSRVDNVCEPPPTHTFIDDCASYDPTEPSDPISPLNGQLESSDDQTHSEN
KALQSGSEGGESSPTCSADIHPITQTDEDDQRDTNQTPETSTELNHGGCN
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtctctgagcagagtgatggggatccagacttccagctccttatggctgta
tatgatgagaacatcctgaagaatcctttctacttggcattagagaaacagagaccggac
ctctgcagtcgagtggcagagatccacggcatcgttctggttccttgttgtggaagtttg
gccgtcagcagctactcagactctcagtttgagaactatgttctgcagccactggaggat
ggataccagactgtggatggaaaggaggtcaggatccaggacaggcaggtcctgctggga
tccggctttccggctccggcgtcgatccccatcctgtttgatgaaaccttctacaatgac
caggagcagagctacagcatcctgtgcatctccaggcccttcgaggtggagccgagcccg
ggtgagctcagcccaccacccccatactgtctgaagagcctggaggaggtcagggagttc
ttgggccgccacgcccagaagctggacaaattcatccacggcttctgtcaggccttcaaa
gagcaggagaggaagggactccgacaccacatagactcggtgaacggtctttacactaaa
tgtcttcagtgtctgctgagagactctcgcctgaaacttttggcgaaacaggagcttcag
atgactcttctcaaacaggctgtagagatgtatgttcatcatggtatccatgatttaatt
tttaactttgtgggaacacttgaagccagccaggatgccgccttcaacaaaaccagcagg
agtctgcaggagctgcagcagaaagacctgggagtcaaacctgagttcagtattaacttg
tctcgggcaaagagagagctgagtcagctcaaccagcagacctcccccctcctcaaactg
ttctgcctgcgcagagtcgccctgacggccacacagacccccagacgcactgtcagtata
gaggctgtgtgtgcggacgacctgctgtctgtcgtcctctatctgctggtgaagacggaa
atacccaactggatggccaacctgagttacatcaggaacttctgcttcagccactccagt
aaagatgaactcagctactgtctgagcaccttcgaggctgcagtggagtacatcaacctg
gggaagctgcaggacaccggctcaggcgagctgaatgacaaggcactgttcaaagagagg
atgagtctgctgtatcagagtgctgccacgcccattcactgtctgtttgagcacatagcg
aatggaaacgaagtggaggtggaacgtctgctgagtgaaggagagaacaacgaggacgtc
aagatgtgtcaccccctctgttcctgtgacatctgtgacctccagctgtccggccgtttg
aacgacccatccatcgtcacgccattctccagagacgaccgaggttacactccgctgcac
gtcgctgcagtctgtggtcagtctcagctcattgacctgctggtatgtaaaggagcgccc
gtcaacgccacagactaccacgccctgacaccactgcacctggcctgtcagcggggatac
cagggagtcacgctgctgctcctgcactacaaagctaacacagacgctcaggacaacaac
ggcaacacaccgctgcacctcgcctgcatgtacggacacgaggactgtgtgaaggcgttg
gtgtactacgacgtccaaacgtgccgtctggacctgcagaacgataaaggcgacacagcg
ctgcacatggcggcccgctggggctacgagggaatcatccaggtgctgctggagaacgga
gcgagcaccgacatcctgaacaagagcaaagactcgccgctgcagtgtgcactgaactcc
aagatcctcatgttgttacagtcgacccagaacggacgtcagcgcagtggcagcggagtc
gattcgcccagtcgctcccctctggcctcagactgcagcagccgtcgctcatccatctcc
agcacatcctctctgggctccgaggccaaaccagagggagaacgggtccgacacagagag
gtggagaagctgctgcgtgctgtggcagacggtgatgtggagatggtgcgttacctgttg
gagtggatggatgaggaagaggaggatgaaggagaactccggtccgaggctctgctctgc
cacccactgtgtcagtgtccgaactgcgctcccactcagaagctatccgtcctgcaggcc
ggagctctcggcgttaacagctgtaacattgacggtttcacacctctccacgttgcggcc
ctacacggccactctgcgctggctgccttgctgatccgccacggagccaacgtcaacgct
cgcaccaaccagagtgctacaccgcttcacctggccacccagaacagccacgtccaggtg
gtgaggtttctgcttgagtgcaacgccaaactgaacaagaaagatcactatggcaacacg
cctctaatacatgcctgtctctgtggaaacctggagacagccaccaccctgttacagagt
aatgcattggtgaacgtagcgaaccttcagggcaacacggccctacatgaggcggtgcgg
ggtggacaccaggcgctggtggagctgctgctgaggggtggagccttgcctggcatcagg
aacaagaggcagaggacggcgctggactgcgcctacgaactgggcggcaagaacactgag
atcctgagagctctgcagaaagcgtctggactgtctcctgacgatgaaccaatcaaactc
ctctctgtgcccaaaggcgctctggctcattcattcgtccagcgcctgaggctgcaagat
cacgccaacgggaggagacagaagctggccatcagcaggattcaacagatgaagaaaggc
tcctctggtcctccccccaggtctttatccccaaaccaggtgaatcctgacaggaggagg
ttgaggcgaggtgagacggtggaggtcagcagcccctcagcaagcctcaacgctgggccc
cggctgagagagcggcccctgggtcgctgtcacacccttgactctggagaacaaacacca
gagcagcctgagccctcacacactccagacacgactgaacaaactccaccagagagtaat
cagacacacactccgagcgacagccctccttcagtaggtgttcagatgtccacagatgta
gacgatacacaggctgacaccagtcaaacacactccaccgatgactgcagcaccggcagt
gagactccaccatcctcgccctctaatgcactgtcacgtgttgataatgtgtgtgaaccc
cctcctacacacacgtttatagatgactgtgcttcatacgaccccaccgagccgtctgac
cccatcagccctctgaatggacagctagagtcatctgacgaccagactcacagtgaaaat
aaggctttgcagtctggaagcgagggcggtgagtccagtcccacctgctctgctgacatc
cacccaataacccagactgatgaagatgaccagagagacaccaaccaaacgccagaaacg
agcacagagttgaaccacggaggctgcaactga
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