Larimichthys crocea (large yellow croaker): 104927061
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Entry
104927061 CDS
T04659
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104927061 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104927061 (rbm22)
Spliceosome [BR:
lco03041
]
Complex B
Other components
Prp19-related factors
104927061 (rbm22)
Complex C
104927061 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_2
Nup35_RRM_2
RRM_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
104927061
NCBI-ProteinID:
XP_010739357
UniProt:
A0A6G0I3W6
LinkDB
All DBs
Position
I:36078525..36083267
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAESAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPGTSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgggctccaacacctacaatagacaaaactgggaagacgcggatttt
ccgattctgtgtcagacatgtttaggagaaaacccttacatccgtatgaccaaggagaag
tatgggaaagaatgcaagatctgtgctcgaccctttaccgtgttccgatggtgtccgggg
acacggatgcgtttcaagaagacagaggtctgtcagacctgcagtaaaatgaaaaatgtt
tgtcagacctgcctgctggacctggagtacggtttgcctatccaggtcagagacaccggg
ctgtctgttaaagatgaggttcctaagtcagatgtgaataaagagtactacacacagaac
atggagagagagatagccaactctgatggcacaaggccagtaggccagcttggtaaggcg
cccagctcgagtgatatgttgctgaaactggcgcggaccacaccatattacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggagaggagtgtccc
tacaggcacgagaagcccacagatcctgatgaccctctagccgaccaaaacattaaggac
cgttactacggcatcaatgacccagtggctgacaagctgctgaaacgggcctcgactatg
cccagactggacccaccagaggacaagtccatcagcaccctctatatcgggggtttggga
gatactgtcacagacggagatctaaagagtcacttttaccagtttggtgagattcgtacc
attaccatagtccagaggcaacagtgtgccttcatccagtttgctacgcggcagtcggct
gaatcggccgctgagaagtccttcaacaaactcatcattaatggacggaggctcaccgtc
aagtggggaaggtctcaggcagcgagagggaaggagggcatcaaagatggtgtcagcgag
atgggcaccaggcttgatcctgtacctggactgcctggagctcttcctccaccaccagct
ttagacgaagaggctcctgcaaactacttcaacctggacccgggcacctctcctgcagtc
atgaacattgctctgcccccacctccaggcatcaaccctcctcctccaggttttggccct
cctatgtttcaccccatgggtcacatggctccaccgatgccccctccaatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggtgctcatgctgca
catggctcccgtcatggcgattag
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