Larimichthys crocea (large yellow croaker): 104927084
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Entry
104927084 CDS
T04659
Symbol
hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104927084 (hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104927084 (hnrnpu)
Spliceosome [BR:
lco03041
]
Common components
Common spliceosomal components
hnRNP proteins
104927084 (hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
CPT
AAA_17
AAA_22
Zeta_toxin
ATPase_2
Motif
Other DBs
NCBI-GeneID:
104927084
NCBI-ProteinID:
XP_010739388
LinkDB
All DBs
Position
XI:complement(20623827..20633859)
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AA seq
810 aa
AA seq
DB search
MSSINVKKLKVNELKDELKKRNLSDKGLKAELMDRLQAALDEEALVGDPALDQEAASDEG
FGQAADQEGMGEEEEGDGPIEESMEANEEEEEEEEEEPENGGNGDAVAEDEEMGEGEEDE
DDEMDPMLKGDVDDMEKIEAEDGEPGDQAAEGDADKDTNADQKNKKGVKRRREEHGRGYF
EFIEENKYSWASFKSPVPPLEEEDEEFDDTKVCLDAYNCDLHFKVSRDRYSASSLTMESF
AYLWSGGKATYGVNKGKACFEMKITEKIPVKHISPKNMEIHDVQVGWSLATGTLLLGEEE
HSYAYSGKGKKTTNCVTEDFGETYEENDVICCLIDFEGDEVVMSFSKNGGEPAVAFQVSK
DTLGGQALFPHIICHNCAVEFNFGQMETPYFPQPQDYTFLQQIAVDDRVRAIKGPQTKAD
CEIIVMVGLPGSGKTTWVKNHVQENPGKYYILGSDTIVDKMMINSLKRQSKDITKLTAIS
QRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVCPSDEDYKQR
VQQKVESDGKEVPEHAVLKMKGFYSLPEEGESFNEVIYAEMQKEEAAKLLEQYKEESKTA
LPAEKKPNQGSTTPKRGGGLRGGGRGGKNQFGRGGGPGPRGGGRGGFQNRGNFRGAPGPR
GGFNRPPRGFLPPPAFRGGFHNRGNYNRGGGPIPSLGGSPRGGPMRGGNMGPRGGPMNRG
GPMHRGNMSRGGGGNMNRGGNRGHPGQFHQRGGNRGNFGNKNGNFGNNRNSGNFGGNRNG
MDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaatcaacgtcaaaaagcttaaagttaacgagctgaaggacgagctgaaaaag
cgtaatctttcggacaaggggctcaaggccgagctgatggaccgcctgcaggccgcgctg
gatgaggaggcccttgtcggggaccctgcgctggaccaagaagccgcgtcggacgagggt
ttcggccaggccgctgatcaggagggtatgggtgaggaagaagagggcgacggcccgata
gaagaaagcatggaggccaacgaggaggaggaagaggaagaagaagaggagccggaaaat
ggaggcaacggcgacgccgtcgccgaggacgaagagatgggtgagggggaagaggacgag
gacgatgagatggatcctatgctcaagggagatgtagacgacatggagaaaatagaggca
gaggatggtgagcccggggaccaggctgctgagggggatgcggacaaagacacgaatgct
gatcagaagaataagaagggtgttaagagacgccgggaggaacatggaaggggctacttt
gaatttattgaagagaacaaatacagctgggcctcatttaagtctcctgtgccacccctc
gaggaagaagatgaggagtttgatgacacaaaagtctgtctggatgcctacaactgcgac
ctgcactttaaggtatcacgggaccgttacagtgcctcatctctcacaatggagagtttt
gcttacctgtggtccggaggcaaggccacctatggtgtgaacaagggcaaagcctgcttt
gagatgaagattacagagaaaattcctgtgaagcacatttctcccaagaacatggagatc
cacgatgtgcaggtcggctggtccttggccactggcaccctgctccttggtgaggaggaa
cattcatacgcatactctggtaaaggcaagaagaccaccaactgtgtgacagaggacttc
ggagaaacttatgaagagaacgatgtcatctgctgcctcattgactttgagggtgacgag
gtggtgatgtccttctccaagaacggcggggagccagccgtcgctttccaggtcagcaag
gacaccctgggcggccaggcccttttcccacacattatctgccacaattgcgctgtggag
ttcaactttggccagatggagactccgtacttcccccagccccaggactacaccttcctg
cagcagattgctgtggatgaccgagtccgggcaatcaagggaccacaaaccaaggctgac
tgcgagatcatagtgatggtcggtctaccaggttcagggaagactacatgggtgaagaac
catgtccaggagaaccctggaaaatactacatcctgggcagtgataccattgtggacaag
atgatgatcaacagcctgaaacgccagtcgaaggacatcacaaaactgactgccatttcc
cagcgagcaccgcttttcttgggaaagtttatcgagatcgctgcccgcaagaagaggaac
tacatcctggatcatactaacctgtctgctccaggccagaagaggaagatgtgcttgttt
gcaggtttccagcgcaaggctgtggtggtctgcccctctgacgaagactacaagcagaga
gttcagcagaaggttgagagtgatggcaaagaagtgcctgagcacgctgttctcaaaatg
aagggcttctactctctgcctgaggagggagagagcttcaatgaggtcatctatgctgag
atgcagaaggaggaggctgccaagctgctggaacagtacaaagaagaaagcaagactgct
ctgccggctgaaaagaaacccaatcagggaagcacaacaccaaaaagaggcggtggcctg
cgcggtggaggccgcggaggaaagaaccagtttggccgcggtggtggacccggaccgaga
ggaggtggccgtggaggcttccagaacagaggcaacttcagaggagctcctggccctcgt
ggtggcttcaaccgtccacctcgtggcttcctgcctcccccagccttcagaggagggttc
cataaccgtggaaactacaaccggggcggcggtcccattcccagcctaggcggatccccc
aggggtggcccaatgagggggggtaacatgggacccagagggggacctatgaacagaggc
ggcccaatgcacagagggaacatgagcagaggaggtggaggcaacatgaatcgtggtgga
aacaggggacatcccggccagtttcaccagaggggaggtaaccgtggcaactttggcaac
aagaatggcaactttggcaacaacaggaacagtggcaactttggcggcaacaggaacggc
atggacaaggcccaagccttcaaccagagctggcagcaagggttctggaaccagaagccc
tggagccagcagtatcagcctggatattactaa
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