Larimichthys crocea (large yellow croaker): 104927105
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Entry
104927105 CDS
T04659
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104927105 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104927105 (nup107)
03036 Chromosome and associated proteins [BR:
lco03036
]
104927105 (nup107)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104927105 (nup107)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104927105 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
TetR_C_31
DUF3990
Motif
Other DBs
NCBI-GeneID:
104927105
NCBI-ProteinID:
XP_027138274
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Position
X:complement(189499..199865)
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AA seq
907 aa
AA seq
DB search
MDWGQNELPSPVVRDDEVTIAARRRRKKVAFPSPGSGSPIASTATPARSLLRNTPASLYR
QAVTPRVPDVSAILAPGGRTPRYTHTPRNALSSLNLDDSDWTNSLYVSPVFGLENTSFFT
DDITNLSSALLKEDDPGEAAAASLFPEFLGSFLKHSSSAVFELLEDYQTLCQDKVDVLQS
VVLRAGQNSKTAGVRWLLQQENCTWRLITSLYRDRVQLAMEDDLMTDMVVPSESEKVVVE
QLFQRDAVIRQSQLVVDWLESIAKDQIGDFSDNIEYYAKNVCWENTLHALKLRRKSGTAF
TVPLVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTEEAQRLCKRCGQAWRA
ATLEGWKLYHDPNMTSGSIELQPVEGNPQRGIWKACCWRMAEEEQLNRYERAIYAGLSGN
LKPLLAVCESWEDCVWAHFRVMVDSLVEKDLMSSGMAHQEVETLPREYLEANWSMEKVFE
ELQASETKRVLEETREHYHVIQKFVILGDLDGLLEEFSDWLAASKPLPSHLLRFMTHLVL
FFRSLGLALKDEVCVDVLKAYVSLLIRDQQTDLVASYVSQLPAELATAQYAAFLETVTQP
ELRPHCLQLATEAGLDVAAITKLVVENVRERDETEFTHHSQALETATTKDDLRKIDVIDW
LLFDPAHRAESLKQSNAIMRKFLALQKHDAAKAVFSKVPEDSMREIYCQWAGLGQTATPA
EDENAIREHLCIRAYLEAHEAFTDWFSHSSSAPQKPAPAPEAKFTERVANEMREKEYQAS
LAAWSCRLDVLTEDVKERIYNVLLFVDGGWMIDNRQDSEPDSERSHQMAVLRSLCLPRLS
FLLLSVLQNSSRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLALLDRGSDP
LGYELQP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagaatgagctgccgtctccggtggttcgagacgacgaggtgaccatc
gctgcccgcaggaggaggaagaaggtggccttcccgtcacccggcagcggcagccccatc
gcctccacggcaacgccggcccgttccctgctgaggaacactccagcttcactgtacaga
caggccgtgactccgagggttcctgatgtttccgcaatactggctccaggaggccgaacg
cctcgatacacgcacacgcctagaaacgccctcagcagtctcaacctggacgacagcgat
tggaccaacagcctgtacgtctcgcctgtctttggcctggagaacaccagcttcttcacc
gacgacatcaccaacctcagctcggcgctgctgaaggaagacgaccccggcgaggctgcc
gcggccagtctgttcccggagttcctcggctcgttcctcaaacactcgtcctctgccgtg
ttcgagctgctcgaggattatcagacgctctgccaggacaaggtggacgtgctgcagtcc
gtcgtcctcagagcgggtcagaacagtaaaaccgccggagtgcgctggctgctgcagcag
gagaactgcacctggagactgatcacctccctgtacagggatcgagtccagctggcgatg
gaggacgacctcatgacagacatggttgttcccagtgagagcgagaaggtcgtggtggag
cagctgtttcagcgggacgccgtcatacgacagagtcagctggtcgtcgattggctggag
agcatcgccaaggatcagatcggagacttctctgacaacatcgagtactacgccaagaac
gtctgctgggaaaacacactgcatgctctgaagctgaggagaaagagcggcacggccttc
accgttcctctggtcactgagctggacccggacgctcctctccggcagcagcgcccgctc
gctgacctggaccgagaagacgacgcccggctgctgaagaacttgttcacgctgatcaga
gcgggcatgaccgaggaggctcagaggctgtgtaagcgctgtggtcaggcctggagagca
gcgactctggaaggctggaaactgtaccacgaccccaacatgacctcaggcagcatcgag
ctgcagcccgttgaaggaaaccctcagagaggaatctggaaggcgtgctgctggaggatg
gctgaagaggagcagttaaacagatacgagagagccatctacgccggcctgagcggaaac
ctcaaaccgctcctggcagtgtgtgagtcgtgggaggactgtgtgtgggcgcacttcaga
gtgatggtggactcgctggtggagaaggatctgatgtcgtcgggtatggcccaccaggag
gtggagacgctgccacgggaatacctggaggccaactggtccatggagaaagtgtttgag
gagcttcaagcttctgagacgaagagggtgttggaggagacacgtgaacattaccacgtc
atccagaagttcgtcatcctgggagacctggacggtctgctggaggagttttccgattgg
ctggcagcctctaagcccctcccctcccacctgctgcgtttcatgactcacctcgtgctg
tttttccgctctctgggtctggccctgaaggacgaggtgtgcgtggacgtgctcaaggcg
tacgtctccctcctgatccgcgaccagcagaccgacctcgtggcgagctacgtcagccag
ctgccggccgagctcgccaccgctcagtacgccgctttcctggagaccgtcacccagccg
gagctccgcccacactgcctgcagctcgcaaccgaagccggtctggatgtcgctgcgatc
accaagctggtggtggagaacgtgagagagagagatgagacggagttcacgcaccacagc
caggcgctggagacggcgaccacgaaggacgacctgaggaagatcgacgtcatcgattgg
ctcctgtttgaccccgcccaccgcgccgagtccctgaagcagtccaacgccatcatgagg
aagttcctggccctgcagaaacacgacgcagccaaggcggtgttctcgaaagtccctgag
gactccatgagggagatctactgccagtgggcggggctcggtcagaccgccacgcctgcc
gaggacgagaacgccatcagagaacacctgtgcatacgagcctacctggaagcccacgag
gccttcactgattggttcagccacagtagctccgccccgcagaagccagcgcccgcccca
gaggccaaattcaccgagcgagtagccaatgagatgcgagagaaggagtaccaggcgtcg
ctggccgcctggtcgtgtcgtctggacgtcctgaccgaagacgtcaaagagagaatctac
aacgtgctgctgttcgtggacggaggctggatgatcgacaacagacaggactcggagccg
gactcagagcgcagccaccagatggcggtgttgcgctctctgtgtctgcctcgcctcagc
ttcctgttgctcagcgtgctgcagaactcgtccagacaccaggaggcgctgcgactggcc
gacatcatctcgtctgaccagcaccgcctctaccaggttttctccaaagaggagttgcgg
aggttccttcagaagttgcgggagtcgtcgctcgccctgttggaccgaggatccgacccg
ctgggctacgagttacagccatga
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