Larimichthys crocea (large yellow croaker): 104927130
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Entry
104927130 CDS
T04659
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lco03037
]
104927130 (nphp4)
Cilium and associated proteins [BR:
lco03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104927130 (nphp4)
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Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
104927130
NCBI-ProteinID:
XP_027144582
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Position
XV:870332..1020237
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AA seq
1456 aa
AA seq
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MVKTEDISTMADGWKEVVERSRLVPPPRQTVRLAVESHFTQSQGFQLSLSRLTAAHLPQE
VSEGEQNVTYQLRVTLFDRNHQQFFGKTWKSRPQRMKNNKISFNEVLYFHTSLRLPSTVV
VLELVSLSPRPDGSQHALGRGFTLLELFTNRPEAQAADGDRRLSLHHGSPRGLLHPVLRD
TVDYSSLLKTIDGAHLDCVIKNHPALVSMIHLLPENVLVSGNENIPGLSASPTGDALLRP
QMLKMLPFTLNRLTISLQPSLEKFESQLLQLINADCHNTKQPGPEGTQRTVAIQERRLHV
GVHNGWCFLDKPQVVVLEPLASGAKGTLTKDSLTTSSLPQMLGLRSSLELRLTNHRALAI
VFQLEFVFSAPIGRETMLSTTSTSRAAFLQCLRWGIWCPFQEPADWKGKEVQLVLQGGAK
QNPHGVMVYSTEMSAKTQSPAPLSASGTAQVSEAKDTITFRLSSSLERKASSPKASLRTK
QEDISRHRRSPSSPSQGQKHAPLASPPDSPQGPGLSLSQLAATSRYPTISHSSSALPWQQ
PFPSLLHPSPLASAHQLSHVACSRVSNIAHLEMDLQREGGVSPSGLDEGDPLQELPFTPV
HAPVITLGMNVPSSCSVSSRSSLAHLYSAGFPDIVDHSGQVAEVLDPTEPVPFDPQREET
DLLHGNLLVFQFLAFTRIPTAGVGPNWPDNIYFTFQFYRFPPVTSQQLKLLTSDKVQHKA
SDPLPCVLASINKDGTVNSGSPGLQVQFRVDDGFLKPGEKRWFLRYLALHTMHIDIWDSD
SLLLIGSTAIELKYMLRQGKSAVQALHEVEVLTTDYVGDDTLLASTDLVPQSGFSPMTVH
TIVRGRLHLRTGNIGYPVDLSKRKAADVMTSHSYIITPRKVTGGFRGGSLSTRNILQLNG
KHSRNTAQACRLEIDGEHVPSFRRGIGADTIVPGEHNLNEPDSGQRKLNCMAAVHQREGK
EDAKAAKVTDRTKEARSAKERHQVKHSEERSKAEGIANMLSQAITTQHLLYASLGSAEYM
EFVLKNPFNVPQTVTIHSDDPELSVITSTEEWSYFKALTKTLTPLEENMFHLEEGIPGPR
VYLRPKESIHIPLKYQSFRCDHTMALQGPSFLPTGKGSQMAKKNLSNIVAAKTIKVTFKA
EDGKPMAICQVNVEPTPHVVDQTFRLYHPELCFLKKAIRLPPWHDPTGYTVGDSDTTTHI
SVRCSDPNIICQTRMLVPGEPQDVYLKVPGSPSPHIKMFFVMVFTDKWMAAPSQIWQIYV
HFLERVDVSCVTGQRNCQSLVLRGKQAIRKVKCFSSHPQEIEVDPEGVFVLPPAAVQELQ
LKVQPWRAGSRFLYVNAVDVEHRRLVTAWLLCLNVHRPVLSKAFEVSVPVGGGRGSSRKI
TYTNPYTSSRTFLLRSDHPDLLQFKEDKFQIGGGESYTIGLRFAPSQSPGSVEILVYVNN
LEEKTEETFCVKVNYS
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaacagaagacatttcaaccatggcggacggctggaaagaagtagttgagaga
agccggttggttcccccgcccaggcagactgtccgcctggctgtggaaagccacttcacc
cagtcccagggcttccagctcagcctcagccggctgactgctgctcacctcccgcaggag
gtgtcagagggggaacaaaacgtgacctaccagctgcgagtgaccctgtttgatagaaat
caccagcagttctttgggaaaacatggaagagtcgacctcagaggatgaaaaacaacaag
atctccttcaatgaggtcctgtacttccatacgtctctgcggttgcccagcacggtggtc
gtcctggagttggtgtccttgtcacccaggccagacggctcccagcatgccctggggcga
ggcttcactctcctggagctttttaccaacagaccagaggctcaggctgctgatggggac
agaaggctgagcctacaccacggatcaccaagaggccttctccaccccgtgctgagggac
actgttgactacagcagtctcctgaagacgattgatggagcacatctggactgtgtgata
aaaaaccacccagcgctggtttccatgatccacctccttccagagaatgtccttgtatct
ggaaatgagaacattcctggactttcagcttctccaacaggagatgcgctgctgaggcca
cagatgctcaagatgctgcccttcaccctgaacagactgaccatctccctgcagccgtcc
ctggagaagtttgagagccagctgctgcaactcatcaatgctgactgccataacacaaaa
cagccaggaccagagggtacacagagaacggttgccatccaggaaaggaggcttcatgtc
ggggttcataatggctggtgtttccttgacaagccccaagtggtggtgctggagccccta
gcctcaggggccaaaggaacactcaccaaggacagcttgacaacatcatccctccctcag
atgctgggccttcgcagcagcttggagctcaggctgaccaatcatcgagctttggcaatt
gtgttccagctggagtttgtcttctctgctccaattggccgtgagacgatgctgtccacc
acctcaacatcccgagcggccttcttgcagtgccttcggtgggggatttggtgccccttc
caggagcctgctgactggaaggggaaagaggtacagcttgtactgcaaggaggcgcaaag
caaaaccctcacggagtcatggtctacagcacagagatgtctgccaaaactcagagccct
gctccactctcagcttcaggcacagctcaggtctcggaggcgaaggatacaataacattt
cggctgtcgtccagtctggagaggaaggcatccagcccgaaggcatctctgaggaccaaa
caggaggatatctcacgtcatagaagatcaccttcatcaccttcacaaggtcaaaaacat
gctccactagcttctccaccagattctccacaaggccccgggctctcactgtctcagctg
gcagctacttcacgctacccgaccatcagccactccagctcggcgttgccatggcaacag
ccatttccttctctgctccatccttccccgttggcatcggcccaccagctgtcacatgtc
gcctgctcacgtgtcagcaacattgcccacctggaaatggaccttcagcgggagggaggc
gtgtcaccttcaggtctggacgaaggagacccacttcaggagctgcccttcacccctgtc
cacgcccctgtcatcaccctggggatgaatgtgcctagctcctgctcagtcagctccagg
agttcattggcccacctctactcagctggcttccctgacattgtggaccacagtggacag
gtggcggaggtcctggaccccacagagcctgtgccctttgacccccagcgtgaagagact
gaccttctacacggcaacctgctggtgttccagtttctggcatttaccagaataccgacg
gcgggtgttggtcctaattggcctgacaacatctacttcaccttccagttctatcgtttt
ccaccagtcacatcacagcagctcaaactgctgaccagtgacaaggttcaacacaaagcg
agcgatccacttccctgtgtcctggcctccatcaacaaagacggcactgtcaactctggc
tctccaggcctgcaggtgcagttcagggtagatgatggtttcctgaagccaggagagaaa
cgctggttcctgcgctacctggccctccacaccatgcacatcgacatatgggacagcgac
tcattgctcctcataggttctactgctatcgagctcaagtatatgctgcgtcagggtaaa
tcagcagtgcaggccctccatgaggtagaggtcctgaccacggattatgtgggagatgac
accctgctggcaagtacagatttggtcccacagtcaggcttcagccccatgacggtccac
accattgtcaggggccggctacacctacgcacaggcaacatagggtacccagtagatctt
agcaagaggaaggcagcagatgtgatgacgtctcattcttacatcatcacacctcgtaaa
gtcacaggtggcttcagaggaggaagcctgtccaccagaaacatcctccaactcaatggc
aagcactcgaggaacactgcacaagcatgcagactggaaattgatggcgaacacgtgcca
tcattcagacgtgggatcggagctgacaccatagtgcccggagagcacaacctaaacgag
cctgacagtgggcaacgcaagctaaactgcatggctgccgtacatcaacgtgagggcaag
gaagatgctaaagctgctaaggtcacggatcggactaaggaagctcggtcagccaaagaa
cgccatcaggtcaaacacagcgaagaacgcagcaaagcagagggcatcgccaatatgttg
agccaggccatcaccacccaacacctgctctatgccagcctgggctctgctgagtacatg
gagtttgtccttaagaatccctttaatgtacctcagactgtcaccattcacagtgatgac
cctgagctcagtgttatcactagcacggaggagtggagttacttcaaagctctgaccaaa
actctgaccccattggaggagaacatgttccacttggaggagggtatccctggacccagg
gtttacctacggccaaaggagagcatccatattcccctgaaataccagagcttccgctgt
gaccacaccatggcccttcagggaccaagcttcctacctacaggcaaaggttcacagatg
gccaagaagaatctgtccaatatcgttgctgccaagactatcaaggttacatttaaagca
gaagatgggaaaccgatggccatctgccaggtgaacgtggagccaacacctcatgttgtc
gaccagacattccggctttaccaccctgagctctgcttcctcaagaaagccatccgtctg
ccaccctggcatgaccccacaggttacacagttggagactcagacaccacgactcacatt
tccgtacgctgcagtgaccccaacatcatctgccagacaaggatgctggtgccaggggag
cctcaggatgtgtacttgaaagtaccagggagtcccagtccacacataaaaatgttcttt
gtgatggttttcactgataagtggatggcagcaccctcccagatctggcagatttacgtc
catttcctggagcgagttgatgtcagctgcgtgactggccagcggaactgtcaatcactg
gtgctgagggggaagcaggctattcgcaaggtcaaatgtttctcatcacacccccaagag
attgaggtggacccagagggggtgtttgttttgcctcccgcagcagtgcaggagctccag
ctgaaagtgcagccatggcgagcaggcagccgcttcttgtatgtgaacgcggtggatgtg
gagcaccggcggctcgttaccgcctggctgctctgtctcaacgtccaccggcctgtgctg
tccaaggcattcgaagtgtctgtcccagttggtggtgggcgtggcagctccagaaaaatc
acctacaccaacccctacaccagcagccgtacatttctgctccgctctgaccacccggac
ctgctccagttcaaagaggataaattccagatcggcgggggagagagttacaccatcgga
ctacgattcgccccaagccagagtcccggctcagtggagatattggtctatgtgaacaac
ctggaggagaagacggaggagacgttctgtgtgaaagtcaactactcatga
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