Larimichthys crocea (large yellow croaker): 104927302
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Entry
104927302 CDS
T04659
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104927302 (scube1)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104927302 (scube1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
EGF
CUB
hEGF
TNFR_ELAPOR1_6th
DUF6821
Motif
Other DBs
NCBI-GeneID:
104927302
NCBI-ProteinID:
XP_019113188
LinkDB
All DBs
Position
XX:complement(5737424..5835056)
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AA seq
1020 aa
AA seq
DB search
MGSACFSRDVCLFILLINTCRVMGNVGLADADECAEGSDDCHIDALCQNTPKSYNCICKP
GYKGDGKQCEDMDECENDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECMDN
NGGCQQVCVNTMGSYECQCTEGFFLSDNQHTCIHRSDDGMNCMNKDHACAHICREAPGKG
GVSCECRPGFELAKNQKDCTLTCNYGNGGCQHTCDDTDTGPVCGCHQKYALHSDSKTCIE
KDEAAIESSEFNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTL
QPDGKTCKDIDECQENNGGCDHFCRNTVGSFECSCQKGHKLLTDERTCQDIDECSFERTC
DHTCINYPGSFECLCNKGYILYGLTHCGDIDECSISNGSCEHGCVNTQGGYECVCPPGHK
LHWNKKDCIEAVKCLPNGKPAPRAQLTCTKSGGAEVCSLSCPSNALFLADSENSYTLSCG
VPVQPGKAPQKRNATAALPTCADTLAAPIKQKARFKIKDAKCHLRPRNKEKHRDSSKQSL
QGGQFPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEMEMKEEEASDSCNVD
CVRERTKQKLQSAMRTLRKSINKQQFYIQFSGTEYEVAQKPSRVPEGAEACSTGQVLRDG
KCVSCGVGTFYSGEQEQCVQCPPGTYQDTMGQLSCEPCPSTEGQGIAGAKNVSQCGGQCP
AGHYSADGFRPCQFCPLGSYQPEPGRVLCFPCGGGLMTKYEGSVSFRDCEAKVHCAPGHY
YNSSTHRCIRCPAGTYQSEFGQNYCITCPGNTTTDFDGATNVSHCKNQVCGGELGEYTGY
IESPNYPGDYPSNVDCVWTINPPHKRRILIVVPEIFLPIEDECGDVLVMRKSALPTSITT
YETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRLY
ASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKEMFPRSFIKLLRSKVTRFLRPYK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcttgtttttcccgggacgtttgtttgtttatcctcctcataaatacttgc
agggtgatggggaatgtcggactcgcagatgcagacgagtgtgcagagggttcggacgac
tgccacattgacgccctctgccagaacactcccaagtcctacaactgcatctgcaagccg
ggctacaagggagatggcaagcagtgcgaggacatggacgagtgtgagaacgactacaac
ggaggctgtgtccacgaatgtatcaacatacctggaaactacaggtgcacctgctacgat
ggcttcatgctggcccacgacggacacaactgtctggatgtggacgagtgcatggacaac
aatggcggatgccagcaagtgtgtgtcaacaccatggggagctacgagtgtcagtgcacg
gagggattcttcctcagtgataaccagcatacctgcatccaccgctctgatgacggcatg
aactgcatgaacaaggaccacgcctgcgcccacatctgcagagaggctccaggcaaaggc
ggggtgtcgtgcgagtgccgtcccggctttgagctggccaaaaaccagaaagactgtaca
ttgacgtgtaactatggaaatggcggttgtcagcacacatgtgatgacacggataccggg
ccggtgtgtggctgccaccagaagtacgccctgcactcagacagcaagacctgcatcgag
aaagatgaggctgcaattgagagctctgagttcaatgccacgtcagtagctgatgtggac
aagcgggtgaaacggcggctacttatggagacctgcgccgtaaacaatggcggctgcgac
aggacatgtaaagacacagccactggggtgcgctgcagctgcccagtgggattcaccctg
cagcccgacggcaaaacctgcaaagacatcgacgaatgccaggagaacaacggaggctgt
gatcacttctgccggaacacagtgggctccttcgaatgcagctgccagaagggccacaaa
ctgctcaccgatgaacggacatgccaagacattgacgagtgctcctttgagagaacctgt
gaccacacctgcatcaactatcccggcagctttgagtgcttatgcaacaagggatacatc
ctgtacggcctcactcactgtggagacatcgatgagtgcagcatcagcaacgggagctgt
gagcacggctgtgtaaacacccagggtggctacgagtgtgtgtgtccaccaggacacaaa
ctccactggaacaagaaagattgcatcgaggcggtgaagtgtctgcccaatgggaagcca
gcaccccgagcccagctgacctgcaccaagagcggaggggctgaggtctgctctctctcc
tgcccgtccaacgccctcttcctcgcagactcagagaacagttacacactgagctgtgga
gtgccggtccagcctggtaaagctccacagaagaggaatgccaccgccgctttacccacc
tgtgccgacacactggctgcacccatcaaacagaaagccaggtttaagatcaaggacgcc
aagtgtcacctgaggccccgcaacaaggagaaacacagagactcgtccaagcagagcctg
cagggaggtcagttcccctgcaccgacgactgccaggtaacttttgtcaacctcaagtgt
gactcgtctaagaagcgcagacgaggacgcaaatctccttccaaagaggtttctcacatc
acagctgagttcgagatggaaatgaaggaggaggaagcctcagactcatgtaatgtggac
tgtgtgcgggagaggacgaagcagaagctgcagagtgccatgcggacactcaggaagtcc
atcaacaaacagcagttctacatccagttctctggaacggagtacgaggtggcgcagaaa
ccgtccagggtaccggagggtgctgaggcctgcagcacaggtcaagtcctccgagacgga
aagtgtgtgagctgtggcgtggggacattctacagcggggagcaggagcagtgtgttcag
tgtcctcccggtacctaccaggacaccatgggtcagctgtcgtgtgagccgtgtcccagc
actgaaggacagggcatcgccggagcaaagaatgtgtctcagtgtggaggtcagtgtcca
gcaggtcattactctgctgacgggttccgtccttgccagttctgcccgctgggctcctac
cagccagaaccaggccgggtcctctgctttccctgtggaggaggtctcatgaccaagtat
gaaggatcagtctccttcagggactgtgaagccaaggtgcactgtgctcctggacattac
tacaactccagcacccaccgctgtatccgctgcccagcaggaacctaccagtctgagttt
gggcagaactactgcatcacctgtccggggaacaccaccactgattttgacggcgccacc
aatgtctcccactgcaaaaaccaggtgtgtggaggggagctgggagaatacacaggctac
attgagtctcctaactaccccggggattacccgtccaacgtggactgtgtctggaccatc
aacccaccacacaagaggcggattctcattgtggtaccagagatcttcctccccatcgag
gatgagtgcggagacgtgctggtcatgaggaagagtgcgcttcccacctccatcaccacc
tatgagacgtgtcagacctacgagcggcccatcgccttcacctctcgctctcgcaagctc
tggattcagttcaagtccaacgagggcaacagtggcaaaggcttccaggttccatatgtc
acctacgatgaggactaccagcagctgatagaggacatagtacgagatggcaggctctac
gcctccgagaaccaccaggagattctgaaggacaagaagctgataaaggctctgttcgac
gtgctggcccacccccagaactacttcaggtacacggcgcaggagtccaaagagatgttc
cctcgctccttcatcaagctgctgcgctccaaagtcaccaggttcctacggccgtacaaa
tag
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