Larimichthys crocea (large yellow croaker): 104927303
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Entry
104927303 CDS
T04659
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog
KO
K07277
outer membrane protein insertion porin family
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104927303 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lco03029
]
104927303 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104927303 (samm50)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
104927303 (samm50)
Transporters [BR:
lco02000
]
Other transporters
Pores ion channels [TC:
1
]
104927303 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
DUF4277
Motif
Other DBs
NCBI-GeneID:
104927303
NCBI-ProteinID:
XP_019113134
UniProt:
A0A6G0HRC3
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Position
XX:5837169..5843960
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AA seq
470 aa
AA seq
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MGAVHAKSLDPLPMHGRDLGVNPDDLVEAPEVEQESKQEILENKDVVVQHVNIQGLGRTK
EDLLGYEISDVFHAKNLIDVMKKAHIARQKLLRLGIFKEVEVLIDTSEGTDALPNGLDVT
FEVIEVKRLTGSYNTMVGNNEGSMVLGLKLPNMLGRAEKLTFQFSYGTKETSYGLSFFKP
QPGHFERNLTLNMYKVTGQFPWSSLKETDRGMSAEVNFPLGVTNHTLKWEGVWRELGCLA
RSASFAVREESGHSLKSALSHTVSVDSRNSAIFPSRGALLRINQELAGYTGGDASFLKED
FELQLNRRLFWDSVLSASLWGGMLYPLGGQPSCIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGDGPRAHLQKLA
ECIRWSYGAGIVLRLGNIARLELNYCVPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgtccatgcgaagagtctggatcctctcccaatgcatggccgggacttgggc
gtcaaccccgatgacttggtggaggctccagaggtggagcaggagtccaagcaggagatc
ctcgaaaacaaagatgtggtggtccaacatgtcaacatccagggtcttggaagaactaaa
gaggatctgcttggctacgagatctcggatgttttccacgccaagaacctcattgatgtg
atgaaaaaagctcacatcgccagacagaagctgctccgcctggggatcttcaaagaggtg
gaggttctaatcgacacatctgaaggcacagacgctctgcccaatgggctggatgtaacc
tttgaggtgatcgaggtaaagagactgacgggaagctacaacaccatggtcggcaacaat
gaaggaagcatggtcctgggtctgaagttgcccaacatgttgggccgagctgagaaactc
accttccagttctcctatgggaccaaggagacgtcatatggcctgtcctttttcaagccc
cagcctggacactttgaacgcaacctcaccctcaacatgtacaaagtcaccggccagttc
ccatggagctccttaaaagagaccgacagaggcatgtctgcagaagtcaactttcccctc
ggagtgactaaccacacgttgaagtgggagggtgtctggagggagctgggctgcctggca
cgcagcgcttccttcgccgtgcgcgaggagagcggacactcactgaaatctgccctctcg
cacactgtgtcagtggattcaaggaattctgccattttccccagcagaggtgccttactc
cggatcaaccaggaactggctgggtacacaggaggagacgccagcttcttgaaagaggat
tttgagctgcagctcaacagacggctcttctgggactcggtcctctctgcctctctgtgg
ggtgggatgctttatccattgggaggacagccgtcctgcatcgctgacaggttctacctt
ggaggtccaaccagtgtacgagggtttggaatgtacagcatcgggccacagagtgaaggt
gactatctgggcggagaggcgtactgggcaggtggtctgcacctctacactccgctgccc
ttcagaccaggcaagggaggcttcggagacctcttcagaacacacttcttcctcaacgca
ggaaacctctgcaacctcaactacggtgatggcccgcgggcacaccttcagaagctggct
gagtgcatccgctggtcgtacggagcgggcatcgtgctgcggctcggcaacatcgccaga
ctggagctcaactattgtgtacccatgggagttcagagtggagacaggatatgtgacggt
gtccaattcggagcaggaatccgcttcctgtga
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