Larimichthys crocea (large yellow croaker): 104927350
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Entry
104927350 CDS
T04659
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104927350 (tmc5)
03037 Cilium and associated proteins [BR:
lco03037
]
104927350 (tmc5)
Transporters [BR:
lco02000
]
Other transporters
Pores ion channels [TC:
1
]
104927350 (tmc5)
Cilium and associated proteins [BR:
lco03037
]
Other cilia and associated proteins
Stereociliary proteins
104927350 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF2681
Motif
Other DBs
NCBI-GeneID:
104927350
NCBI-ProteinID:
XP_019115701
LinkDB
All DBs
Position
X:39919145..39929768
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AA seq
975 aa
AA seq
DB search
MTSYSSGGFFNPAYHDSETLEIDRRSSSRTHHTNPYAREDPERGNMHYLSPDQTNADDAV
GRVPWGGWQEESWRGRESIPMGLISTRPGSPSWQHDLNHSTFQIPADSRYDRSHSARLPS
MSGNMTMRWRGISMRRMSMFPNSDPAHLAFTEDAIRNEMENEEQNLVKELVALSTRDRIR
AIRDLPMSFEEKKHIRSQVLTFKSAKQSRQFTCFADCSENMSLSFRRCGYNVRSARQTLE
LWQGIMKEIGGTFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPVLVYDPSPNIPLNVS
FRGLEILTGAGYFNYTVMYYGGYSNETLVGLSDYNMQLAYFFTIALYMVLCGIALIFSMA
SSFKKNYVLADSSSSSAWQLLCSWDFNITNERAVRQRKNNLRVQLTESLSERAQGELLTL
SEKLKHFGIYLGSWFLSTGLAVGCGVGIYYLCIYEKKHTTDAANWSLLQEAETLLVPFVV
SLINLVVPLFYSLFNKFEHYSSQRKQIYALVVRNVLLKMSILGVLCYYWMNVVAEKFSCW
ESMVGQALYRLVIFDFFFLMLGSFFGEFLRNVMGRRLLPCLGVPEFDVARNVLELIYAQT
LAWIGIYFSPLLPAIQILKFFILFYLKKVSLTQNCQPPRRSGRAAQMQTIFIALLFFPFF
VGALSIVAYTAWSLTPSEQCGPFRGLNNTFSVVEVWIDKLETIPGSQWVVWIFQNVIRSE
IFYFFITLIIIVVIYIFWQVTQGRKQLIVQLRQQIINEGRDKSFLLEKLQNLQKSNKKAK
QKNHKKRASRRSDDHSSGGQSNSNAMVQALLARQRIEDEEERHRAGGVPVPSDISNSSAL
AQAMLARQRAEDQNEDSYQMSDRHSSSSIALTHSIQVAMVQGRDENYGMSGLSENPVNTS
SAVTQAMQARQRAEQHRADDTDDLPSSVSSVMMQVMQARQRAEELPQNPAPAGSSALIQA
MLARQQAQNEYDDGY
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcagcggaggatttttcaaccctgcctaccatgacagcgagactctg
gaaattgatagaaggtcttccagcagaacccaccacactaacccctatgccagggaagac
cctgaaaggggaaacatgcattacctgtcacctgatcagaccaatgctgatgatgctgta
ggaagagtaccatgggggggttggcaggaggagagctggaggggcagagagagcatcccc
atggggctcatttcaacgcgccctgggagtccttcatggcagcatgacctcaatcacagt
acgttccaaatccctgctgactctcggtatgatcgatcacattcggctcgacttccttca
atgtcaggtaacatgacaatgagatggagggggatttcgatgagaaggatgagcatgttt
ccaaatagcgatcctgcccatctagctttcacagaggatgccatcaggaatgagatggag
aatgaggaacagaaccttgtcaaggaactcgttgccctgtcgacacgagaccgaattcga
gccatccgggaccttccaatgagctttgaagagaagaaacacatcaggagccaagtattg
acgttcaagtctgctaagcaatctcgccagttcacatgttttgcagactgctctgagaac
atgtcactgtctttccgcaggtgtggttacaatgtgaggtcagccaggcagaccctggag
ctatggcaaggcatcatgaaagagataggtggcacatttggcaccagcgtcctttcctat
ttcgtgttcctcaagtggctgcttatgttcaacattttctccttcctggtaaactttggc
ttcatcaccatcccagtccttgtttatgacccctcacccaacattcctttgaatgtgagc
tttagaggactggagatactgactggagctggttacttcaactacactgtcatgtactat
ggtggctacagcaatgaaaccctggtgggtctttcagactacaacatgcagctggcctat
tttttcacaattgcactatacatggtgctgtgtggaatcgcactcatcttcagcatggcc
agctcattcaagaaaaactatgtgctagcagactcatcttcgagcagtgcatggcagctt
ctgtgcagctgggattttaatattaccaatgagagagcagtgagacaacgcaagaacaat
ttacgtgtccaactcacggagtctttgtcagagagagcccaaggtgagctgttaaccctc
tctgaaaagctgaagcactttgggatttatctgggttcctggttcctgtccactggcttg
gctgttggctgtggagttggcatttattatctctgcatatatgaaaagaagcacacaaca
gatgctgccaattggtctctgctccaggaggcagagactctcctggtcccctttgtagtg
tctctgataaacctggttgtgccactcttctactccctgttcaacaagtttgaacactac
tccagtcaacgcaaacagatctacgctctggtggtcagaaatgttttactcaagatgtcc
attctgggtgtcttgtgttattactggatgaatgtggttgctgagaagttttcgtgttgg
gagtccatggtgggacaggctttgtaccgtctggtcatttttgatttctttttcctgatg
ttgggatccttctttggagagtttctaaggaatgtgatggggaggagattattaccatgt
cttggggtgccagagtttgatgtagccagaaatgttcttgaactcatctacgcacagact
ctggcctggattggaatctacttctctcctctgctgcctgccatccagattctcaaattt
ttcatcttgttttacttaaagaaagttagcctgacccagaactgccagcctccacggcgg
tcaggcagggcagctcaaatgcaaaccatcttcatcgcccttctcttcttccctttcttt
gtcggagccctgtccattgttgcatacactgcctggagcctgactccctcagagcagtgt
ggtccgtttcggggtctcaacaataccttcagtgtggttgaagtctggatagacaagctg
gagacgatccctggttctcaatgggttgtctggatctttcagaatgtcatcagaagtgaa
atcttttacttttttatcacactcattatcatagtcgtcatatacatcttctggcaagtc
actcaaggccgcaagcagcttattgttcaactgagacaacagattattaatgaggggaga
gacaagtccttcttgttagaaaagcttcagaacctccagaaatctaataaaaaagccaaa
cagaagaatcataaaaagcgtgccagccggcgttcagatgaccactcctcaggcggtcag
tccaactcaaacgccatggttcaggctttactcgctcgccagaggattgaagatgaggag
gagagacacagggctggtggagttcctgttccctctgacatctccaactccagtgctctg
gctcaggccatgttggcccgccagagagctgaggaccagaatgaagattcgtaccagatg
tctgatagacactcatcatcctccatcgccctcacacattccatacaggtggccatggtt
caagggagggatgaaaactatggcatgtcaggtctttctgaaaaccctgtcaacacatcc
agcgctgtcacacaggcgatgcaagccagacaaagagcagagcagcacagagcagatgat
acagatgatctgccatcttctgtgtcaagtgttatgatgcaagtcatgcaagcccggcag
agagcagaggaacttccacagaacccagctcctgcaggctccagcgctcttatacaggcc
atgctggctcggcaacaggcccagaatgagtacgatgacggttactga
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