Larimichthys crocea (large yellow croaker): 104927359
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Entry
104927359 CDS
T04659
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lco00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lco01100
Metabolic pathways
Module
lco_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104927359 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104927359 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lco01003
]
104927359 (xylt1)
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
104927359 (xylt1)
Glycosyltransferases [BR:
lco01003
]
O-Glycan biosynthesis
Glycosaminoglycan
104927359 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
104927359
NCBI-ProteinID:
XP_010739720
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All DBs
Position
X:complement(39739625..39815251)
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AA seq
950 aa
AA seq
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MVGGLCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSSVRGKRDRVAG
NKAAGSDYFQHGVRQQQQQQQHLPPPGKGTSRHIQQPDGYYSHRPKEKSKVDSNNENSVP
KDFENIDNSNFGARSQPHRQSVGATSSKQQRGHLQEKAHAQQQAWRDSSPSLGRSSNEVL
PVGHQPLAVGNNASYPGGQGVAGVSHQQYRASQAQQAQSQHRHQHPHRRQATAAPLEVTY
DQPPKCEISGKEAISALSRAKSKECRQQIAEVYCRHKEGQLMPEKVTRYCPLEGKANANV
QWDEDSAESFPSKPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQV
HALAAQYPNVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWSWDFFINLSAADYPIRT
NNQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDRKIPEGISVDG
GSDWFLLNRMFVEYVINSKDDLVTNMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLR
ITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQ
LDSYLFGPFPQGTPSLNSYWESVYDEPDGVASLSDTKLTYYHSFARLGLARAAASLQGNP
KDHSCRYFPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLETMETWVAPKKNFKLTTP
PSSTFSRLQFAEIGAEWDAKERMFRNFGGLMGPMDETMGMQKWSKGPNVTVTVVWIDPTN
VIAATYDILIDANAEFTHYRPPLNQPLRPGVWSVRILHHWSPVAEMRFLIAPLAYNKHQP
IRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNIPVSLGYVEQAKRNAALTGPELERWSDSL
VGELWEAADVCAVGPTACPVMQACPKNPWSSLSPDPKSHLGAPRADGRIR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggcttgtgtgctcgcaggttggcccgccggtcgcggtccgccctgatagca
gccctcacggtgctgctggtgcagacattgattgtgtggaacttcagcagcctcgactcc
ggcgaagacagggaaaacggaggctccagcgtacgggggaagagggaccgggtcgcaggc
aacaaagccgctggcagcgactatttccagcacggggtccggcagcagcagcagcagcag
cagcatcttcctccgccggggaaggggacgtctcgacacatacagcagccggatggatat
tactcccaccggccaaaggagaaaagtaaagtggacagcaacaacgagaactccgtgccc
aaagactttgagaacatagacaatagtaactttggtgcacgctcacagccgcaccggcag
tctgtaggggccaccagcagcaagcagcagcgggggcacctgcaggagaaggcccacgcc
cagcagcaggcatggcgggacagctccccgagtctgggtcgcagctcaaacgaagtgcta
cctgtaggtcaccagccgctggctgttggcaacaatgcctcctacccgggcggtcagggt
gtcgccggagtgtcgcatcaacagtaccgtgcctcacaggcccagcaggcccagtcacag
cacagacatcagcacccccacaggaggcaagcgaccgcagcgccactggaggtgacctac
gaccagccaccaaagtgcgagatcagtgggaaggaagccatttcagctctatccagagcc
aagagcaaggagtgccggcaacaaattgctgaagtgtactgtagacacaaggaagggcag
ttaatgcctgagaaggtcactcgctactgccccctcgagggtaaagccaatgctaatgtc
cagtgggacgaggactctgctgagagctttccatcaaaaccagtcaggatagcgttcgtc
ctggtggtccacggacgagcgtctcgccagtttcagcgcctcttcaaagccatctaccac
acctcgcactactactacatacacgtcgatcagcgctctaactacctgcacaggcaggtg
catgccttggctgcgcagtatccaaatgtgagggtgacaccctggcgcatggccactatc
tggggcggtgccagtctgctgaccatgtatcttcgcagcatggctgacctgctggccatg
agggactggagctgggatttcttcatcaacctcagtgctgccgactaccccataaggacc
aataaccagctggtggccttcctgtcaaaatacagagacatgaacttcatcaagtcccac
ggcagagacaacgccaggtttatccgtaaacagggtctggatcgtttgttttacgagtgc
gacacccacatgtggaggctgggggaccgtaaaatcccagaaggcatctctgtggacggc
gggtccgactggttccttctcaaccgcatgttcgtcgagtatgtcatcaactccaaggac
gacttggtgaccaacatgaagcgcttctacgcctacactctgctgcctgcagagtcattc
ttccacacggtgctggagaacagcgcccactgtgagagcatggtggataacaacctgcgc
atcaccaactggaaccgtaaactgggctgcaagtgccagtacaagcacatcgtcgattgg
tgtggatgctccccaaatgatttcaagccagcagacttccaccgcttccagcaaacagtg
cggcccaccttctttgccaggaagtttgaagccagcgtgaaccaggagatagtgaaccag
ctggacagctacctgtttggaccgtttccccagggaacgccgagcctaaactcatactgg
gagagtgtgtacgatgagccagacggcgtggccagtctgtcggacacgaagctcacgtac
taccactccttcgcacggctgggccttgccagagctgccgcctcgcttcagggaaaccca
aaggaccacagctgcaggtacttccccatgggccacccggtgtcagtgcatctctacttc
cagtcagaccagttccaaggctacctggtgaagcaccacgccaccaatctggccactagc
aagctggagaccatggagacctgggtggcacccaaaaagaacttcaagttaaccacgcct
cccagcagcacattcagcaggttacagttcgcggagatcggggccgagtgggatgccaaa
gaacgtatgttccgaaactttggcggcctgatgggtcccatggacgagacgatgggcatg
cagaagtggagtaaaggccctaacgtcaccgtcacagtcgtgtggatcgaccccaccaat
gtcatcgcggccacctatgacattctcatcgatgccaacgccgagttcacccactaccgc
ccgccactaaaccagcctctgcggcctggcgtgtggagtgtccgcatcctgcaccactgg
agccccgtggctgagatgcgcttcctcattgccccgttggcgtacaataaacaccagccc
atacgacaagaggatactctgaagctgcacaacgggccagcaaagaacagctacatggag
cagagtttccatggcctgaacccagtgctcaacatccctgtcagccttggctacgtggag
caggccaagaggaacgcggccctgaccggcccagagctcgagcgttggtcagacagcctg
gtgggcgagttgtgggaggcagccgacgtctgcgctgtgggccctaccgcctgccctgtc
atgcaggcctgccccaagaacccttggagctccctgagcccagaccccaaatcccatctg
ggagcacctcgcgcagacggccgcatcaggtag
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