Larimichthys crocea (large yellow croaker): 104927457
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Entry
104927457 CDS
T04659
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104927457 (vps50)
Membrane trafficking [BR:
lco04131
]
Protein recycling
Others
EARP complex
104927457 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
104927457
NCBI-ProteinID:
XP_019118203
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All DBs
Position
XIII:complement(47954114..48049652)
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AA seq
967 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTGASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQDATPTPDD
AAASESDKSVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAVSTTSPAQEELSLFQQYLQEGNPFEMHTEHKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDVPLKSVSRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMYESSGLGLISSRLRTTLNRIQESLIDMEAVGENAGVHGPAEDRKEKVPSPHLSQLVVL
TNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLGDVSRHV
RIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPI
PDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaaatctctcatggcccggcagggtctgaaaagcccccaggagagcatg
gcagacctcagtcctgtggagaacctgaggatccccagcaaggaggagttgcgggagctg
agggagcagccaatcgacccccaggcggagcaggagatcatcgacagcatcgaggaggtc
tacttctccaacgactccttcgacatggtgcagcacgaactggagaaactccctcctgag
ctgaacctgcaggagctggaggagtacagagacaagctgaaaagacaacaagcagcggtt
tccaaaaaggtcgccgatctcattctggagaaacagcctgcttatgtcaaggagctggag
cgagtaacggctttgcagactaacctccagttggcagcagtcatttgtactaatgcaagg
aggcaactgagcgtagcgaaggagggattcacaggagccagcctgggtctcttggccaat
cagaggagacgacaacttctaacaggcctgcttaagtcactaaggaccatcaagacgctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagactatccaggtgcgatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagc
gaattgaactccaaacttcaagacaccctggaacaaatagaggagcagcttgatgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcacactacaccaaggtccagctggcttac
acgctcctgggaaagacacagactgctatggaccagctccacatgcacttcacccaggcc
atccacaacacagtgttccaagtggtgctgggatatgtggagctgtgtgctggcaacgct
gataccaagtttcagaagatgcagtacaaggacctgtgcacgcatatcaccctggacagc
tatattccctgcctgaccgatctgtgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcatgaagagcatgacaaacaggatgccacacccactccagatgac
gcggcagcttcagagtctgataagtcggtggtggaccgcagctacgtgaagaagaagctg
gagcacggactgacacgaatctggcaggatgtccagttgaaagtgaaggcctacatcctg
ggaacggacatgtctaacttcaaatacgatgatttcatagtggtactggatgtcatcagc
aggttaatgcaagtcggcgaggagttctgtggcagtaagtcagaggtcctgcaggagtcc
atcaaacgccagagtgtcaactactttaaaaactatcacagggcacgactggaagaactg
aggatgtttctggaaaatgagacgtgggaactgtgcccggtgaagtctaactttaacatc
gcccagcttcatgagtttaagttcatgggacagtgtcgttctccgtccgtctccccgagc
agacaggccgtgtccaccacgagcccagctcaggaggagctgtctctgttccagcagtac
cttcaggagggaaacccctttgagatgcacactgagcacaaagaggaagagacggaagat
gtgctggcatctaacgggtatgagtcagacgagctggagaagagtgtgtatcaagattac
gacagcgatagtgacgtccccgaagagctcaagcaggactacgttgacgagcagacgggt
gatgtccccctcaagagtgtttccagagagaccataagaagcaagaaaaagtctgactac
aacctgaataaaaccaacgccccgatcctcaccaacaccaccctcaacgtcatccggctt
gttgggaagtacatgcagatgatgaatattctgaagccgatcgcatttgatgtcatccac
tgtgtctcacagctcttcgactactacctgtacgctgtctacaccttctttggacgcaat
gacatgtatgagtcatcgggtttgggccttatcagcagcagactgagaaccacgttgaac
aggatccaggagagcctcattgacatggaggcagtgggagagaacgcaggagtgcatggc
ccagcagaggacaggaaggagaaggtccccagtccccatctcagccaacttgtggtcctc
actaacagtgggacactgtatggacttgcacagagggtggtggccactgagtctcttgtg
tttctggctgaacaatttgaatccctccagtcccacctggacacaatgatgcctgcagcc
aagaaacctttcctgcagcagttttactcccagacggtgtctacagccagtgaacttcgg
aaaccaatctactggattgttgcagccaaggccatcgactacgaacaaatgttgctcctg
atggctggagtcaaatgggacattagggagataatgtcacagcataatgtatacgtggac
gtgctgttaaaggagtttgagcaatttaacaagcggctgggtgatgtttccagacatgtg
cgcatcccgctgcctgtgtccaacgtcctgtgggagcactgcattcgcctggccaacagg
actcttgtagaaggctacgccaatgtgaagaaatgcagcaatgaaggccgggccttgatg
cagctggactttcaacagttcctcatgaagctggagaagctgacggacctgcgacccatt
cctgataaagagtttgtggagacctacatcaaggcctattacctgacggagaatgacatg
gagcagtttatcaagaatcacagggagtattccatgaagcagctagccaacttggtgaac
gtttgtctgggctcgcatataaacaagaaggctcgtcagaaacttctggcggccatcgat
gacattgatagacccaagagatag
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