Larimichthys crocea (large yellow croaker): 104927478
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Entry
104927478 CDS
T04659
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104927478 (fubp1)
03041 Spliceosome [BR:
lco03041
]
104927478 (fubp1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104927478 (fubp1)
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104927478 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH_KhpA-B
KH-I_KHDC4-BBP
KH_PNO1_2nd
Secretin_N
Motif
Other DBs
NCBI-GeneID:
104927478
NCBI-ProteinID:
XP_027147598
LinkDB
All DBs
Position
II:8404327..8414753
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AA seq
672 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSGMGGMGGPPRSISEEFKVPDGMVGFIIGRGGEQ
ISRLQQESGCKIQIAPDSGGMPDRSVTLTGPPESIQTAKRLLTEIVEKGRPAPAFNHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPF
KVQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGGGGDSLDVPVPRFAVGIVIGRNGE
MIKKIQNDTGVRIQFKPDDGSTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGG
GRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPP
PNADPNIKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPG
PPGAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWA
AYYAQYSQQPQAPMTPTSGAPGTTQTNGQGDPQAAGQSGQADYSKAWEEYYKKMGQQNQQ
PQDYTKAWEEYYKKQGQAAPQATATAAPATQPGGQPDYSAAWAEYYRQQAAYYGTANPQT
MGAAPQAPQVHP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagcagcgtggctcccccgtcctctaacgccggcggcggcatgaacgac
gcttttaaagacgctctacagcgagcacgacagatcgcagcaaaaatcggtggtgatgga
gttgcggcacctccaactaatgaatttggctacggaggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaccaaccggagacaaagaaagtg
gctacaaatgatgccttttcagggatgggaggaatgggtggccccccgaggtcaatatca
gaggaattcaaggtgccagatgggatggttggattcattatcggaagaggcggcgaacaa
atatcgcgtctgcagcaggaatctggatgtaaaatacagattgcacctgacagtggagga
atgccagataggtcagtgacattaacaggacctccagagtccatccagactgcaaagagg
ctactaacagagattgtagagaaggggcgtccagctccagcgtttaaccacaacgacggc
ccggggatgactgtccaggagattatggtccctgcctctaaagccggacttgtcattggg
aagggaggtgaaaccatcaaaagccttcaggaaagagccggagtaaagatggtcatgatc
caagacgggccccaaaacacaggcgcagacaagccactccgcatttcaggagagcccttt
aaagttcagcaagccaaagagatggttatggagctgatcagagatcagggcttcagggag
cagaggggcgagtatggctcacgagtcgggggaggcggaggaggaggaggaggcggcgac
agtctggatgttcccgtcccccggtttgcagtaggaattgtgattggcagaaacggagag
atgatcaagaaaatccagaacgacacaggagtcaggatccagtttaaaccagatgacggc
agcacaccagacaggatagcacagatcatgggcccgcccgaccaggctcagcacgcagca
gagatcatatccgatctgctgaggagcgtccaggccggtgggcctccaggacacggtggt
ggcagaggccgtggtcgcgggcaggggaactggaacatgggcccccctggtggcctgcag
gagttcaccttcaccgtgccaaccatgaagaccggcctcatcattgggaaaggtggtgag
acgatcaagggcatcagccagcagtctggagccaggatcgagctgcagaggaatcctcca
cccaacgcggaccccaacatcaagatgttcacggttcgcggctcccctcaacagatcgac
tacgccaggcagctggtggaggagaagatcgggggaccagtcactccaatgggcggccca
cacggcccccctggtccacacggaggtccaggcccacatggtcctcctggaccaccagga
cctcctggggctcccatgggtccatacaatcctggaccatacaaccagggacctccagga
ccgcacggtccacctgcgccttaccagcctcagggatggggcaacggctacccacactgg
caacaggggcaacctgatccaaataaagcagcagccgatgccaacgcagcagcgtgggca
gcctactacgctcagtacagccagcagccacaggcgcccatgaccccgacaagcggcgct
cccggcacgactcaaaccaacggacaaggtgacccacaggctgcaggtcagagtggacag
gcagattactccaaggcctgggaggaatattacaagaaaatgggtcaacagaatcagcaa
cctcaggactacacgaaagcctgggaggagtattacaagaaacaaggtcaagcggcccct
caggccaccgcgacagcagctccagccactcagcctggaggccagccagactacagcgcc
gcctgggcggagtactaccgtcagcaggccgcttactacggcacagccaaccctcagacg
atgggcgcagcgccacaagcccctcaggtacacccctga
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integrated database retrieval system
