Larimichthys crocea (large yellow croaker): 104927559
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Entry
104927559 CDS
T04659
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104927559
Cell adhesion molecules [BR:
lco04515
]
Cadherins
Cadherin related
104927559
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
104927559
NCBI-ProteinID:
XP_010740006
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Position
XVI:complement(16153708..16167254)
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AA seq
864 aa
AA seq
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MKKEKKTHALLFLLLLHFTSARQSDYAPYFYDNGPSSTNGNMALFSISEDTPVGTQVYIL
NGTDPEGDPVRYGLTFEQGSKEFFRADSKSGNVTLIQELDREKQGEISVLVSITDGRNKV
VETVRVFVTDANDEPPEFQNLPFIIDIPEDTAPGSSIYRVQAMDKDMGSGGSVSYYLQTS
PFAKFTIDGHSGILRVKPGETLDYETTPTHFVTVVAKDGGGKYKGKHQVLTATATITINL
IDAQDMPPSFVGTPYFGYVYEVSVPGSEIFTVYAKDGDQGKPNMMHYSIMNGSDGVFDIN
STSGCITLTTYPFLLRNELYEIKVKASELGPNDQLQDYDVTTVTVRVVDLNNHPPTFYGE
SGPQSKFEVTMYEHPPAGEILRGFKITVNDSDQGANAKFKLRLVGPNRVLRVVPQTVLNE
AQVTIIVEDTSGIDYEKGPTLSFKLLAVEIDTPERFSATADIVINLLDTNDNVPKFTAEY
YIARVPENSPGGSSVVSVTANDPDSGPWGEVKYTIYGSGADLFTIHPSSGLISTQPWTSL
DAEVRSKYNFYIKAEDSEGKYSLSEAFVTVVDMNDHPPEFDEELLEKTMIIGTPVKVEAM
DDDAESPNNVIQYSIMTADPDNAFDINADTGEIKLKPYIKSMEIVHNITKQKDCKWSLVV
QARDRGSPSFSTTAVVNIDITEATPLKGPMAAFLLKSRDNPMKALGMVTVIITVLVGVTA
LISTAMYMRNSKSNRIMPARRIIKRRPRDQKPWDFRMPLIKFNDPADKFIIGDPESRLKR
GSGSSRPKPPPPSAPSLPPPPPTTRPNERPRAVPTISGALASKVAKTTKSGRRREGQGNM
SSALVSELKMKLEQKMIESNQSCY
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaaaagaaaacacatgctttactgtttctcctcctgcttcacttcacctcg
gcaagacagtcagactatgctccatatttttatgataatggacccagcagtacaaatggg
aatatggccttgttcagcatctctgaggatacaccagttgggacacaggtatacattctg
aacggtacagatccagaaggagatccggtgcgatatggtctgacttttgaacagggctcc
aaggaattctttagagcggactccaaatcaggaaatgtgactctaattcaggagctagac
agagagaaacaaggcgaaatctcagtgctcgtgagcataacggacggtcgcaacaaagtt
gttgagaccgtgagagtgtttgtcactgacgctaatgatgaaccaccagaatttcaaaac
cttcctttcatcattgatatcccagaggatactgctccgggaagtagcatctacagagtc
caagcaatggataaagatatgggctccggaggcagcgtttcatattatctacagacctct
ccgtttgccaagttcaccatcgatgggcacagcggcatccttagagtgaaacctggtgag
actttggactacgaaaccacacccacgcactttgtgacggtggtcgcaaaggatggaggt
ggaaagtacaaggggaagcatcaggtgttgaccgccactgccaccataacaatcaatcta
attgatgctcaagacatgcctccatctttcgtgggaaccccatactttggctacgtctac
gaagtctcagtgcctggttctgaaatattcactgtgtacgctaaagatggagatcaaggc
aaacctaacatgatgcattattccattatgaatggtagtgatggtgtgtttgatataaat
agcaccagtggatgcatcacccttacaacttatccatttctgctgagaaatgaattatat
gaaattaaagtcaaggcgtctgagttaggaccaaacgatcagctgcaggactacgatgtt
accacagtgacggtcagggtggtggatcttaataaccatcctccgaccttttacggagag
agcggaccacagagcaagtttgaggtcacgatgtatgagcatcctcctgcaggagagatc
ctcagaggctttaagatcaccgtcaatgactccgatcagggagcaaacgctaaatttaaa
ctgagactcgtggggccaaatcgagtgctgcgagtcgttccccagacagtgctcaatgaa
gcgcaggtgaccatcattgtggaagacacatctggcatcgactatgaaaagggaccaacc
ctttcttttaagctgctggccgtggagatcgacactcctgagaggttcagtgccacagct
gacatagtgatcaacctgctggacacaaacgacaacgtcccaaaattcacggctgagtat
tacatcgccagagtccctgagaactctcctggaggctccagcgtcgtgtccgtgacggca
aacgatccagattcagggccttggggtgaagtcaaatacacgatttatggatcaggagca
gatttgtttaccatccacccatcatcaggcctcatctccacgcagccctggaccagcctg
gatgcagaggtcaggtctaaatataacttttacatcaaggctgaagattcagaggggaag
tacagcttgtctgaagcctttgtcaccgtcgttgacatgaacgaccaccctccagaattt
gacgaagaactcctggaaaagacaatgattattggcacacctgtgaaagtagaggcaatg
gatgatgatgcagagtccccaaacaacgtcattcagtactccatcatgacagccgaccct
gacaacgcattcgatatcaacgccgacaccggtgagatcaagctgaagccgtacatcaag
tccatggagattgtgcataacatcaccaagcagaaggactgcaagtggtctctggtagtc
caagccagggacagaggctctccatccttcagcacaacagccgtggtcaatattgatatc
acagaggcgactcctctcaaggggcctatggcggcctttttattgaaaagtagggacaat
cctatgaaagctctaggcatggtcactgttatcattactgtattggtaggggtgactgct
ttgatctctactgctatgtacatgcgaaactcaaagtcaaacaggatcatgccggcacgt
cgcatcattaagaggcgacccagggaccagaagccctgggacttcaggatgccccttatc
aaattcaacgaccccgcagataagttcatcattggcgatccagagagccgcctgaagcgg
ggaagcggcagctcccggcccaagcctccaccccccagcgctcctagtctgccccctcca
cctccgaccacaaggccaaacgagaggccccgggcagtcccaacaatatctggtgcgctg
gcctccaaagtcgccaagacaactaaatctggtcgccgcagagaagggcagggaaatatg
agctctgctttagtgtcagagcttaaaatgaagctggagcagaaaatgattgagagcaat
caaagttgttattaa
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