Larimichthys crocea (large yellow croaker): 104927626
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Entry
104927626 CDS
T04659
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X9
KO
K08518
syntaxin-binding protein 5
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104927626 (stxbp5l)
Membrane trafficking [BR:
lco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104927626 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104927626 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
ANAPC4_WD40
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Lgl_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_EML
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104927626
NCBI-ProteinID:
XP_010740044
LinkDB
All DBs
Position
XVIII:complement(7500898..7629066)
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AA seq
1181 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTIGSPSCGSAAGTPTAAPTPREIDVQETLVSENFQLCKTVRH
GFPYQPTALAFDPVQKILAIGSRSGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQWDLRGKKADFRI
YYDEAIHSVGWHHEGKQFMCSHSDGSLTMWNLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRSSDPFIIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMALCETPY
NNEVQEPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDVHESPVTCTAYFAECPPDIIPI
LYSIGAKHKKTGYSQKEWPISGGTWTLGSYTYPEIIITGHADGSIKFWDASAITLQMLYK
LKTSKVFEKPKLGEGRAAELVEEDPFAIQMVSWCPQSRIFCVVGISAHIILYRFSKQDAN
TQIVSLEVRLQCESEDVISPSENENNPCFTEPGSHSPQPHHQHPASPGSGTPEGIKDSIP
CLKVKDRMVRVPPGYQAELVIQLLWVDGEPPQQITSLDINSAYGLLAFGNSNGLAVVDYL
QKTILLCMSTLDLYGAADPYQRLTRSPRRNRQSTSEFCMRGLSNFYSDSKKRIRTSYQSL
TELSDNQQSIDMERSKSPTSDHVNGHCTSPTSQPCSAGKPRVPMGPEGPRLTRRGPGRPP
FRKAQSAACMEISLPVSHTEESRENSFSRSRSSSVSSIDRDTKEAITTLQFGESYARKSD
LVPTPCLWVGTSLGVVLLIPMSIPTDQEERMEEPVTIGPSGAVLMLKGSVLRFGFLDCMG
ALIQSPYEVWRDPNAPEDPDRLRKRKLVHFSPSSSQDTCGEGHLAVVCSERQAKVFLMPS
QSCLFVHNITESSFVLRADVVSVCNSVCLACFCANGHIMTLSLPSLRPLMDINYLPLTDM
RIARTFCFTNGGQALYLSSPTEIQRITYSQEMCDNLQEMLGELFTPTETPEAQNRGFLKG
FFGGNANTFDREELFGEAAAGKASRSLAQHIPGQAGMEGMKVAASGVVGELARARIALDE
RGQRLGELEERTALMMTSAESFHKHAHELMLKCKDKKWYQF
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtgttagacggtctgacaacctcctctccgggagggactatc
ggatccccatcgtgcggcagcgcggccgggactcccaccgcggcgccaactcccagagaa
atcgacgtccaagagacgctagtgtcggaaaactttcagctgtgtaagacggtgcgtcat
ggcttcccttaccaacccactgctttggcctttgaccctgttcagaagatcctggccatc
ggctccagatcaggcggtgtgcggatactggggcgacccggggtggactgctactgtcaa
catgagagtggagcagctgttcttcaactgcagttccttatcaacgagggggcgctggtc
acagcctgtgcagatgacacactacatttgtggaatctccgtcagaggcggccggctgtc
ctgcattcactcaaattcaacagagagaggatcacgttttgccaccttccctttcagagt
aaatggctgtacgtggggacagaacgcggaaacacacacatcgtcaacatcgagtccttc
gttctgtccggatacgtcatcatgtggaacaaggccatagaactatcaactaaaactcat
ccaggacctgtggttcatttgagtgacagcccaaaggatgaaggcaagctgcttataggg
tttgagagcgggacaatcgtacaatgggaccttcggggcaagaaggccgacttcagaatc
tactacgatgaggccatccattcggtcggctggcatcatgaagggaagcagttcatgtgc
agtcactcagatggcagcctgacgatgtggaacctcagaaacaccaccaagccattccag
gtcaccttccctcatggaaagatacagaaggacgggagaaaggagtcatgtaaacccata
ctcaaagtggagtacaagacctcgagaagcagtgacccttttattatcttctctgggggt
ctttcatatgacaaggcaggacggcggccaacattaaccataatgcacggcaaggccatc
actgtgctggagatggactatcctattgtagagtttatggcactctgcgagactccttac
aacaacgaggtgcaggagccttacgcagtggtggtgcttttggagaaggacttaattgtg
gtggatctgacacagagcaacttccctgtctttgagaacccgtacccaatggacgtccat
gagtctccggttacctgcacagcctattttgcagagtgtccaccagacattatccccatc
ctctactctataggagctaaacacaagaagactggctacagccaaaaggagtggccaatc
agtggaggaacatggacgttaggctcctacacctacccagagattataataacaggacat
gctgatggatcgattaagttctgggacgcatctgcaatcacattacagatgttatacaaa
ctgaagacctccaaagtgtttgagaagccaaagctgggtgaaggccgagcagctgagttg
gtggaggaagatccatttgctattcaaatggtcagctggtgccctcagagtcgcatcttc
tgtgtggttggcatctcagcccacatcatcctgtatcgcttcagcaaacaagatgccaac
actcagatagtgtcgctagaggtgcgcctacagtgtgagtcggaagatgtcatctctcca
tccgagaatgaaaacaatccctgcttcacagagcccggctcccactcaccccaaccccat
caccaacacccagctagccccggcagtgggacacccgagggtatcaaagacagcatcccc
tgccttaaggtgaaggaccggatggttcgtgtccctcctggctaccaggcagagctggtc
atccagctgctgtgggtagatggagaacctccacaacagatcaccagcctggacatcaac
tcagcctatggccttttggcgtttgggaactctaatggcctagcggtggtggactacttg
cagaaaaccatcctgttgtgtatgtcgacactggatctgtatggagccgccgatccctac
cagcgccttacccgctccccccgcaggaatagacagtccacctcagagttttgcatgcgt
ggcctatctaacttttattcagattcaaagaaaaggatccgtacatcctatcagagcctt
actgaactctctgacaaccagcagtccatcgacatggagagaagcaaatcgcccacctca
gatcatgtcaatggacattgcactagccccacctcccagccgtgctcggcagggaagcct
cgcgttccgatgggtcctgaggggccacggcttacccgtagaggccctggccgaccgccc
ttccgcaaggcccagtccgctgcttgcatggagatctccttgcctgtgtcccacactgaa
gagagtcgtgaaaactccttcagccgttcacgcagctccagtgtgtccagcatcgaccgg
gacaccaaagaggctatcaccacactgcagttcggcgagtcctatgcgcgcaagagtgac
cttgtgcccacaccatgtctttgggtgggtaccagcttaggtgtggtcctgctcattcca
atgtccattcccactgaccaggaggagagaatggaggaacctgtgaccattggtcccagt
ggagcagtcctaatgctaaagggctcagtgttgcgctttggcttcttggactgcatggga
gctctcatccagagcccctatgaggtttggcgggatcccaatgcccctgaggaccctgac
agactgaggaaacgcaagctggtccacttttcgccatcatcctctcaggacacctgcgga
gagggacatctggctgtagtgtgctccgagaggcaggccaaagtgttcttgatgccctcc
cagtcttgcctctttgtccacaacatcacagagtcatcctttgtgctgcgagctgatgtg
gtatctgtgtgtaacagtgtgtgcctggcctgcttctgtgctaatggacacatcatgaca
ctcagtttgcccagtctaagaccgctgatggacatcaattacctgcctctgacagacatg
cgcattgcaaggaccttttgcttcaccaatggggggcaggcactgtatctcagctccccg
acagagatccagagaattacgtacagccaagagatgtgtgacaacctgcaggagatgctg
ggagagctgtttacaccaacagaaacaccagaagcccagaacagaggctttctaaagggc
ttcttcggaggaaatgccaatacatttgacagagaggagctctttggtgaggcagcagct
gggaaggcttctcggagtctggcccagcacatccccgggcaggctgggatggagggtatg
aaggtagcagccagtggagtagtgggtgagctggcgcgggcccgcattgctctggatgag
agaggccaaaggctgggagagctggaggaacgaactgccctaatgatgaccagtgcagaa
tccttccacaaacacgctcatgagctgatgctaaagtgcaaggacaagaagtggtaccag
ttctaa
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