Larimichthys crocea (large yellow croaker): 104927630
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Entry
104927630 CDS
T04659
Symbol
fat4
Name
(RefSeq) protocadherin Fat 4
KO
K16669
protocadherin Fat 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104927630 (fat4)
Cell adhesion molecules [BR:
lco04515
]
Cadherins
Cadherin related
104927630 (fat4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
Cadherin_2
Fibulin_C
hEGF
EGF_TEN
EGF_CA
Cadherin_4
EGF_2
EGF_DL_JAG
CRA
Wzt_C
Motif
Other DBs
NCBI-GeneID:
104927630
NCBI-ProteinID:
XP_019113983
LinkDB
All DBs
Position
I:complement(22497432..22548147)
Genome browser
AA seq
3282 aa
AA seq
DB search
MVTEGSSPSVVEITLQDVNDNPPVFPNDILDVTIEENVGDGFKIMQLTATDADEGPNALV
TYTIISGADDSFRIDPESGDLIATKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDVN
DHTPKFSRVTYSFDIPEDMAPGSIVAAILASDSDSGVNGEVTYSLEEDDEDETFLLNPVT
GVFNVTRPLDYETQQYYILTAKALDGGGQASTVRVYFNILDVNDNPPIFNTSVYSTSVSE
SLPPGSSIVTVGATDADDGLNAQLLYRIASGDPQGHFVITKEGVLQTKKALDRETQSFYN
LMVTVNDLAPSPMTRFTSTAQVSVILLDVNDCPPTFSSQKMTYIQENTPVDTVVFTAQAT
DADSGPNSYVEYALRGPFGNKFSIGTIDGDVRLVGELDREELSNYTLTVVATDKGEPPLS
STMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLTGTDVIQVFASDADEGTNGQIRFSISG
GNTNSDFRIDSVTGVISVAKQLDREARSSYSLVVQAADRGSSPRVDRTTVNIVLLDVNDC
SPVFELSPYTVHVQENLENLPKNILQVVARDDDQGANGQLSYMLSSGNDEAAFSLSSSGQ
LSLTQTLDREAQGKYTLLITATDSGSPSLSGTGTITVLVSDVNDNVPVFTSSNFHTTIME
DAPTGTDVLLVNSSDADVGVNGVISYSLTGGHGQFSINPATGQIITSSLLNREDRADYQL
LVVATDGGQPQGLSSSATVSVTVADINDNPPHFHHHPYVTHIPASTAAGSLVFAVTVTDE
DSGSNAQLHYSLIGRNSEKFKIDPVRGAITANEKLTGSSEVTLTVRVKDGGANPKTDTTT
VTVRFVTGGNFPVIKVKERAFTFPESQPTNHIVTTVTGSSMRGGPLSYYIASGNLDYAFH
IDQLSGELSIRHPLDYEHIQKYVLWIEARDQGFPPYSSYEKVEITVLDVNDNHPVFDKDP
FHAEILENLSPQRVLMVSAVDLDSGPNGQLEYAIIDGNKENSFSINRATGEIRTTRPLDR
EKVAQYTLKVKATDRGLPPKNTAVKVLISVLDVNDNAPRFSKIFSATVAENAPVGYTVTR
VTTTDEDAGSNAISRYSITDSSLPFSINPNTGDITISRPLNREDTDHYIVKVSAHDSGWT
VSTDVTIFITDINDNAPRFSRPSYYLDYPELTEMGSLVTQVSATDPDEGFNGKIFYFIRS
QSEYFRINASTGEIFVKQQLKYQNSTGASSININRHSFIVTASDRAVKPLMSETTVIVNI
VDSNDNPPEFDSPSYFTPVTKSVKVGTRLIRIVAHDKKDFGLNSEVEFSITGGNSSNKFK
LDKASGWITVASSLIYDMNKIFLIEITANDRGNPPLSTQTSVRIAVTEENHHTPEFSQSQ
ISATVPESLAVGTAIRTLSARDKDKEMNGLITYNITSGNDKGLFSLNGKTGVLSLAQPLD
FEEKKQHELRVSATDGGWIAKTSYVSVTIHVTDVNDNPPVFDPDEYFPIVQENVPSGTTV
VKVNGIDRDSGANAVMAYVIQSSDSDLFVIDPNTGTITTQGFLDYEAKQVYHLTVKAFNV
PDEERCSFANVNIQLKGANEYVPRFVSKQYYFEISEAAPKGTVVGEVFASDRDQGDDGVV
YYLIFGKSRKKGFGINKRTGQIYVTGTLDREKEEKISLKVLAKNTGSIRGADIDEVFVNI
TILDANDPPVFTQELYDVQISEGLSPGGLVTFVSAEDSDSVPSWSRFSYSIAPEFDKNVF
TINPKTGQVSVAAELDRETTPVYNLTIHAVDTGTPPATGSTTVIVNLEDINDNGPTLTTA
YAEVMENQRAGTAVTTLTASDPDLPPNQGPFLFSLLNSGSANSYFSLSSAGVLTTSREID
REQISDFYLSVVIKDSGVPQMSSTGTIHVKINDQNDNPSEPRSMEIFVHYFGNMFPGGSL
GDVKPQDPDIQDRFHCSLIPPSSGLFSIPTGTCNLNSKARSTDGTFEITIRSSDGVHGSV
SNTARVLFMGFTNATVDNSILIRLHSQGVKSFLTNHYLSFLRIANSQLAGLGTGVLLYGA
FELNNQTFLMAAVKRGHGQYVNPSGVATFFQSIKDILYRQSGVQIDAVDHDPCTRNPCQN
GGSCKRRLSVGPDMKTEESVPVILVSNHPLQPYACSCRPGYTGALCETDIDECQPSPCHN
GGTCHNLVGGFSCTCPEGFTGMACERDVNECLSNPCKNGALCQNFPGGFNCLCKSGFAGK
TCDSIINHCECNPCFNGGSCQNRVDGYYCHCPFGVFGKHCELNSYGFEELSYMEFPSLDP
NNNYIYIKFATLKSNALLMYNHDNQTGDKAEFLALEIFEGRMRFSFNLGSGTYKLMTMIK
VSDGQFHTVIARRAGMAASLTVDLCGDDQEQGYCAVSNVAVHTDWILDVQPNRLSVGGVR
SIEPVLHRRGQVATHDFVGCIMEFAVNGRPLEPSQALASRGILDRCPRLEGACTASPCRH
GGTCLDHWSWQQCQCVDGFTGKFCEKYMTADTALSLDGTGRLDYSLKQGPKRDVLLRQSL
QGVTSERASPSRLEVKFRTRSKSGTLLHVQESSNYTTIKLRNGNIHYISDAGVGGKVERT
VGDAVLSDGQWHTLQLVKNGSTTALQVDSSYSRVIQHATQDFGGLSVLTFSLGGIPPGPA
QQKTAAGFDGCLAYVKYNGENLPFTGEHSLVTLTKTSSSVKIGCRGPNLCESSPCWDGLM
CVNQWYTYQCVPPGDCASNPCQNHGSCVPDPQSGFTCVCSEFYTGKTCETLVACLGVQCP
EGTVCKTANNGAFVCSPSPTAETMVLPIWAVPAIVGSCATVLALVVLSLILCNHCKGRNK
TKVPKEPKEKKPKEKKKKKKKKGSENVAFDDPDNIPPYGDDMTVRKQPEGNPKPDIIERE
NPYLIYDETDIPHNNETVPSAPCAPCNGPEADIEHYDIDNASSIAPSDADIIQHYKQFRS
HTPKFSIQRHSPLGFARQSPLPLGATSYTYQPQYTQALRSTPLSHSHSACPTPNPLSRHS
PAPFTKPSSFYRNTPTRELNLARREGSPLDLHNDMCQPPPMFNYATRLGRRSKSPQTMAG
HGHTSRPGSRLKQPIEQIPLETGPPVGLSIEEVERLNTPRPRNPSICSADHGRSSSEEDC
RRPLSRVRNPADGIPAPESSSESDSHDSFTCSEMEYDREKPVSYSSRVPKLSQVNESDAD
DEDYGGRLKQRRYSSRRAEGGPGISQMPPTDQHYTLPHKLGQQAGGFNWDNLLNWGPGFG
HYVDVFKDLALLPENAAAKDIEMNSGDGSVTILNEGEAEQYV
NT seq
9849 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggagggttcctctccaagtgtggtggagatcacactgcaggacgtcaatgac
aacccgcctgttttccctaatgacattcttgatgtgaccattgaggagaatgttggagat
ggcttcaagataatgcagctaacagccacggatgcagacgagggtcccaatgctcttgtg
acatatacaatcatcagtggggcagatgacagcttccggattgatcctgaatcaggtgat
ctgattgccaccaagaagctggatcgggaacgacgttcaaagtattcccttctggtgcgt
gcagacgatggaaaacagtcttctgacatgaggctgaacatcaccgtgaaggatgtcaac
gaccacacgcccaagttctcccgtgtcacatattcgtttgacatccctgaagacatggcg
ccaggctccatcgtggcggcgatcctggccagcgactctgactcaggggtgaacggagag
gtcacctattcactggaggaggacgatgaggacgagacgttcctcctgaacccggtgacg
ggtgttttcaatgtaacacgtccgctggactacgagactcagcagtactatattctgaca
gcgaaggccctggatggaggggggcaggccagcacagtcagagtgtatttcaacatccta
gatgtgaatgacaatcccccgatctttaacaccagtgtgtacagcacgtctgtctccgag
agtctgccgcctggatccagtattgttactgttggagcaaccgatgctgatgatggccta
aatgcccaactcctctacagaattgcatctggtgatccccaaggccactttgtcatcacc
aaggaaggagttctccaaaccaagaaggccttggacagagaaacccagtccttctacaac
cttatggtcacagtcaatgacctagctccatctcccatgacccgcttcaccagcactgct
caggtgtcggttattcttctggatgtcaacgactgcccgccaacctttagttctcaaaag
atgacctacatccaggagaacacaccagtggacacggtcgtgttcaccgcccaggccaca
gatgctgacagtggacccaacagctacgttgagtacgccctcagaggaccctttggtaac
aagttcagcatcggtacaattgatggagatgtcaggttggttggggaactcgaccgtgag
gagctttccaactacactctcacagtcgtagctacagataaaggtgaaccccctctgtct
tcaacaatggatgtgactatggtggttctggatgttaacgacaacacaccaagtttctca
cagaatatctatgatattgagattgaggagaacactttgactgggacagatgtcatccag
gtgttcgcaagcgatgcggatgagggcaccaatgggcagatccgattttctatctcagga
ggcaacaccaactctgatttcaggattgattcagttacaggggtgatttcagtggccaag
cagctggaccgtgaggcacgttcatcctattccctggtggtccaagctgcagaccgagga
agcagccccagggtggaccgtacaacagtcaacattgtgttgttggacgtcaacgactgc
tcccctgtgtttgagctctctccttacactgtccatgttcaggagaacttggagaaccta
ccaaaaaacatcctgcaggttgttgccagagacgacgatcaaggtgccaacggccagctg
agctacatgctaagcagtgggaatgatgaggccgcattcagcctgtcgtctagcggtcag
ctgagcctgacacaaactctggaccgcgaggctcaggggaaatacaccctgctgattaca
gccactgactcaggttctccatctctgagtggaacagggaccataacagttctggtgagc
gatgtgaacgataacgtccctgttttcacctcctccaacttccacaccaccatcatggag
gacgccccgacagggacagatgtgctattggtcaacagctccgatgcagatgtgggcgtc
aatggagttataagctacagcctgactggaggacatggccagttctccatcaacccggct
acaggacagattattaccagctccctgctgaatcgagaagatagggccgattaccaactg
ctggttgtggcaacagatggagggcagccccagggcttgtccagttctgccaccgtgtcc
gtgacggtggctgacatcaacgataacccgcctcatttccaccaccacccttacgtcacc
catatacccgcctctactgcagcagggtccctggtctttgctgttactgtcactgacgag
gattcaggctccaacgcccaactgcactattccctgatagggcgcaactctgagaagttc
aagattgaccctgtcagaggtgccatcactgccaatgaaaaactaactggaagctcagaa
gttacccttacagttcgagtaaaagacggtggagctaaccccaaaacggatacgaccacc
gtgactgtccgctttgttacaggaggaaacttccctgtcatcaaagtgaaggagcgtgca
ttcacgttccctgagagccaaccgacaaatcacattgttacaacagtgactgggtcttct
atgaggggtggaccattgtcatattacattgccagcggcaacctggattatgcttttcat
attgaccagctatcaggcgagttgtctatcagacacccattagattatgaacacattcag
aagtatgttctctggattgaggccagagatcaaggcttcccaccttattcctcctatgag
aaagtggaaataacagtactggatgtgaatgacaatcacccagtgtttgacaaggacccc
ttccatgctgagatactggagaacctttcacctcagcgggtgctgatggtctctgctgtt
gacctggacagtgggccaaatggacagcttgagtatgctatcattgacggcaacaaggag
aacagtttcagcataaatagagcaactggtgaaatacgaaccaccaggccactggaccgg
gagaaggtggctcagtacactttgaaagtcaaagccacggaccgggggttgccacccaaa
aacacagcagtcaaagtgctaatcagtgtactggatgtgaatgacaacgctcccaggttt
tccaagatctttagtgctacagtggctgaaaatgctccagtgggttacactgtcaccaga
gtcaccaccacggacgaggatgctggttcaaatgccattagccggtattcaattacagat
agcagccttccgttcagtattaatccaaacacaggagacataacaataagtaggccactc
aatagagaagacacagatcattacattgtcaaagtgtctgctcatgactctggctggaca
gtaagcacagacgtcactatatttattacagatattaatgataatgcacccagatttagt
cgtccctcttactatctggactaccctgagctcactgagatgggctccctggtcacacag
gtgtctgccacagatcctgatgagggtttcaacggcaaaatcttctattttattcggtct
cagtcagaatatttcagaattaacgccagcactggagaaatatttgtgaagcagcagtta
aaatatcagaactcaacaggtgctagtagtataaatataaatcgccacagctttattgtc
acagcctcagaccgggcagtcaagcctttgatgagtgagacaacagttattgtaaacatt
gtagacagcaatgataaccctcctgagtttgattcacctagctactttacccctgtcact
aaaagtgttaaggttggtacaagactgattaggattgtagctcatgacaaaaaagacttt
ggtctgaattcagaggttgagttctcaataacaggtggaaacagctctaataaattcaaa
ctagataaggcaagtggatggattactgtagcctcgtcccttatatatgatatgaataaa
attttcctcattgagatcacagcaaatgacagaggaaatccccctttgtcgacgcaaaca
tcagtgcgaattgcagtcacagaggaaaaccaccatacgcctgagttctcacaaagccaa
atttcagctactgtacctgaaagccttgctgtgggaacagcaataaggaccctgtctgcc
agagacaaggataaagaaatgaatggccttatcacatacaatattacttcaggcaacgac
aaaggtctgttttcacttaatggtaaaactggagtgttatccctagcgcagcctctggac
tttgaagagaagaaacaacatgagcttagagtttcagccacggatggcggttggattgca
aaaacaagctatgtgtctgtcacaatacatgtgactgatgtgaatgacaaccctcctgtg
tttgatcctgatgagtacttccccattgtacaggagaacgttcccagtggcaccactgtg
gtcaaagtgaatggcatagaccgtgattcgggagcaaacgcagtcatggcgtacgtgata
cagtcatcagacagtgacctctttgttattgacccgaatacaggcactatcaccacccag
ggcttcttggattatgaggctaagcaggtctaccatttaacagtaaaggccttcaatgtc
ccagacgaggagcgctgcagcttcgccaatgtcaacattcagctaaagggagccaatgaa
tacgtaccccgctttgtctctaaacagtactactttgaaatctctgaagctgctccaaaa
ggcacagtggttggggaagtgttcgccagcgatcgagaccaaggagatgatggagtggta
tactacctcatttttgggaagagcagaaagaagggctttggcatcaataagagaacaggc
cagatttatgtcacaggtactctagaccgtgagaaagaggaaaaaatttcactgaaggtg
ttggcaaagaacacaggaagcatccgtggtgcagatattgacgaggtgtttgtgaatatt
acaattcttgatgccaacgaccctcctgtctttacccaagaactgtatgatgtgcagatc
agtgaaggtctttcgcctggtggtctggttacttttgtgagtgccgaggactcagactct
gtcccaagctggagcagattttcatactccattgctcctgagtttgataaaaatgttttc
accatcaacccaaaaactggccaagtgtctgtggctgcagagctagacagagaaacaact
cctgtgtataatcttacaatccatgctgtggatactggcacacctcctgcaaccggaagc
actaccgtgattgtgaatctggaagatatcaatgataacggtccaactttgacaacggct
tatgctgaggtaatggagaatcagagagctggcactgcagttacaacgctaacagcgtct
gacccagatctacccccaaaccaaggccctttcttattcagccttttaaattctggatct
gccaacagctacttcagccttagttcagctggagttttaaccaccagtcgggagatcgac
agagaacagattagcgacttctacctctctgttgtgatcaaagactcgggtgtgcctcaa
atgtcttcaacaggaacaattcacgtcaaaataaatgatcagaatgacaatccttcagag
ccaaggtccatggagatctttgtccactactttgggaacatgtttcctgggggttctttg
ggagatgtcaaaccccaagaccctgacattcaagataggtttcactgctcccttattcct
ccatcttctggtctgtttagtatcccgactggaacatgcaacctcaactctaaagcccgc
tcgacagatggaacttttgaaataactatccgtagcagtgatggtgtccatggctcagtc
agcaacacagcccgagtcctattcatggggttcacaaatgccacagtggacaacagcata
ctcatccgactccattctcaaggagtcaaaagcttccttaccaaccactacctcagcttc
ctacgcattgccaactctcagctagcaggcctgggcacaggggtgctgctttatggagcg
tttgaactcaacaatcagactttcttaatggcagctgtgaaacggggccatggacaatat
gtcaaccccagcggcgtggccacattcttccagagtatcaaagacattttatataggcag
agtggggtgcaaatagatgcagtggaccatgatccttgcacacgtaacccgtgccagaat
ggaggcagctgcaagaggcgtctcagtgtcgggcctgatatgaagacagaagaaagtgtc
ccagtgatccttgtttccaaccaccccctgcagccctacgcctgcagctgcaggccagga
tacacaggagctctgtgtgagacagacattgatgagtgccagccatcaccatgccacaat
ggcggcacctgccacaatctggttggaggtttctcctgcacctgtcctgaaggttttacc
gggatggcctgtgagagggacgtcaatgaatgcctttccaatccctgcaagaatggggcg
ctgtgccagaacttccctggcggcttcaactgcctctgcaaatccggcttcgcaggcaaa
acgtgtgattccatcatcaatcactgtgagtgtaacccttgttttaatggcgggtcctgt
cagaatcgggtggatggatattactgtcattgtccatttggggttttcggcaaacactgt
gaactcaacagttatggctttgaggagctttcttacatggagtttccgtccctggatccc
aacaataactacatatatatcaagtttgctaccctgaagagcaacgctctgcttatgtac
aaccacgataaccagaccggagacaaggcggagtttctggctctggagatcttcgagggg
cgaatgcgcttctccttcaacttaggaagtggaacttataaactgatgaccatgataaaa
gtttcagatgggcagttccacacagtcattgccagaagagccgggatggctgcatccctg
actgtggacctgtgtggcgatgaccaggaacaaggctactgtgctgtgagcaatgtggca
gtacacactgactggatcctggacgtgcagcccaacaggctctcggtgggaggtgtcaga
tcaatagaacccgtccttcatcggcgcggtcaggtcgccacccacgactttgtcggctgc
atcatggagttcgccgtcaacgggcgcccgctggagcccagtcaggcgctggcatcgcgt
ggcatccttgacagatgtccgagactggaaggagcctgcaccgccagcccctgcagacat
gggggaacctgtttggaccactggtcctggcagcagtgccagtgcgtggatggcttcact
ggcaaattctgtgagaaatacatgacagcagacaccgccctgtccctggatggtactggc
cgtttggactactccctgaagcagggccctaaacgtgatgtccttctgagacaatcactg
cagggtgtgacttctgagcgagccagtcccagccgtttggaggtcaagttcaggacacgc
agcaagagcggcaccctgctgcatgtgcaggagagcagcaactatacaaccattaagcta
aggaatggcaacatccactacatctcagacgcgggtgtcggaggaaaggtggagcgaacc
gtgggagacgcagttctctctgacggccagtggcacacactccagctggtcaagaacggc
tcgaccacagcactccaagtagacagcagctactccagggtcatccagcatgccacacag
gactttggtggtctcagtgttttaaccttctccctaggagggataccacccggaccggct
cagcagaaaactgcagcaggttttgatggctgcttggcctatgtgaagtacaatggggag
aacctgccatttaccggagagcacagcctcgtcaccttaactaagaccagttcatctgtc
aagatcggttgcagaggtcccaacctgtgtgagagcagcccatgctgggacggcttgatg
tgcgtcaaccagtggtatacataccagtgtgttccccctggtgactgcgcctctaatcct
tgccagaaccatggcagctgtgtgccagacccccagtcaggcttcacctgtgtctgctcc
gagttctacacaggcaagacttgtgagaccttggtggcctgtctgggcgtccagtgtcct
gagggtactgtctgcaagacggccaacaacggagcgtttgtctgcagtccaagccctaca
gcggagacgatggtcctccccatttgggcggttcccgctattgttggcagctgtgccact
gtccttgccttggtggttctcagcctgattctgtgcaaccactgcaagggccgtaacaag
accaaagtgccaaaggaacccaaggagaagaaacccaaggagaagaagaagaagaaaaag
aaaaagggtagtgagaatgtagctttcgatgacccggataacatcccgccgtatggagat
gacatgacggtacgcaagcaaccagaagggaatcccaaaccggacattattgagagggag
aacccttatctaatctacgatgaaacagacattccccacaataatgagaccgtccccagt
gccccctgtgccccctgtaatggccctgaggcagacattgaacactatgacatagacaat
gccagcagtattgccccttcggatgcagatataatccaacactacaagcagttccgcagc
catacacccaagttctccatccagagacacagcccactgggcttcgccagacagtctccc
ttaccccttggagcaacaagctacacctaccagcctcaatacactcaagcactgaggtcc
accccactcagccactcccactctgcatgccctacgccaaaccctctctccagacactcc
ccagccccgttcaccaaaccctcatctttttaccgaaacactccaaccagagaactcaac
ttggctcgccgtgagggcagcccgctggacctgcacaatgacatgtgccagccaccacca
atgttcaactacgccacccggctggggaggcgcagcaagagcccgcagacaatggccggc
catggtcacacctccaggcccggcagtcggctcaagcagccaatcgagcaaattcccctg
gagacagggcctcctgtggggctgtccattgaggaagtggagcggctgaatactccacgc
ccacgcaaccccagtatctgcagcgctgatcacgggcgctccagctcagaggaggactgc
cgtaggccgctgtcaagggtccgtaaccctgctgatggcatccctgccccagagtcctct
tcagaaagtgactcacatgactccttcacctgctcagagatggagtatgaccgggaaaag
ccggtgtcttacagctcccgagttcccaaactctcacaagtcaatgagtcagatgctgat
gatgaggactatggtgggaggctcaagcagaggcgatactcgagccggagggcagaaggt
gggcctggcatttcccagatgccccctactgaccagcactacaccctgccccacaaactg
ggccagcaagctgggggcttcaactgggacaatctgttgaactggggccctggttttgga
cattatgtagacgtgttcaaggacttagccttgcttcctgagaacgcagcagcaaaagac
attgaaatgaacagtggggatggctcagtgaccattctaaatgaaggagaagctgagcaa
tatgtatga
DBGET
integrated database retrieval system
