Larimichthys crocea (large yellow croaker): 104927660
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Entry
104927660 CDS
T04659
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104927660 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104927660 (dhx36)
03012 Translation factors [BR:
lco03012
]
104927660 (dhx36)
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104927660 (dhx36)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104927660 (dhx36)
Translation factors [BR:
lco03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104927660 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
HerA_C
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
104927660
NCBI-ProteinID:
XP_019125535
LinkDB
All DBs
Position
VII:complement(18586939..18613203)
Genome browser
AA seq
1085 aa
AA seq
DB search
MSHGYGGGGGRRGRRGGRGGYRDGSRERWDRGGGGGGGGSRGHSSDFDQDGGEGGGGGGG
QRDRPPPHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQPG
PQRNSWDARASTSGNWQAAANRGGHCFFDGDEPEEDKLKVEVKSEEEEEEEMGSKKATQK
SQRYFSSAVVKDEPPDTWDDDEEEQQQEEDKEEKEDKEKLRRKDKDLEFLFQEVVRDSSL
DERLKRELASKKSDTKYKEMLKFREKLPSYGKKEELVQLINSNRVLVVSGETGCGKTTQV
TQFILDDYINRGVGSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRL
PRRQGSVLYCTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLIIVKELLNLRDDL
SVILMSATLNAEKFSRYFDNCPVINIPGLTFPVEEFLLEDIVEMTRYRPQNQDRRPTWKR
GFWQGRNARPEKEEKEAEYKESWPCYARTLQGRYSDNTIQTLEMLDNDDKIDLELILALI
RHIVLSEEEGAILVFLPGWDNISSLNDLLMAQQMFRSERFVIIPLHSLMPTVNQTQVFKR
PPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETNFDTNNNISTMMAEWVSLANAKQR
KGRAGRVCPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIARFLEKAL
DPPTEQAVNLAIKNLTDLNALDRVENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVL
TIAASLSFKDPFFIPLGKEKMADMRRKHLSRNSKSDHLTIVNAFQGWEEAKQRGGRCERE
YCWDNFLSANTLQMLQNMKGQFAEHLMHAGFVSSKDPKDPKSNVNSDNEKLIKAVIVAGL
YPKVAMIRPSHSKKRPGAKVYTQADGKVCIHPKSVNAEESEFNYTWLIYHLKMRTSSIFL
YDCTEVSPFSLLFFGGDITIQKDGDQETVAVDQWIVFRSPARIANLVKSLKNELDSLLEE
KIRNPAPVDWQNRQSKDCAVITAIIDLITTQEKPTGGTKGHGRPWASAPRGQHVYFNDDD
DDDDD
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatggatacggcggcggaggtggaaggagaggcagaagaggaggtcgaggaggg
tacagggatgggagcagagagagatgggacagaggaggaggaggaggaggaggaggttca
agaggacacagttctgactttgaccaggatggaggagaaggaggaggaggaggtggagga
caacgggaccgtcctcctccacacctgaagggccgtgagattggtctgtggtatgcaaga
tacggagccgtgaggaggaaacaggctgaccggagatcgcgggcggtggtccaaatggat
gaggcccgagagcagcacatcactaagctgctgaactccgtccaaaatgatcagcctggt
ccacagagaaacagctgggatgcaagagcctctacatctggcaactggcaagcagctgcc
aatagaggtggtcattgtttctttgatggggatgagcctgaagaagataaactgaaggtc
gaggtcaaatctgaggaggaagaggaagaagaaatgggctcaaagaaagcaactcaaaaa
tcacaacgttacttctcctcggcagtcgtcaaagacgagcctccggacacgtgggatgat
gatgaagaagagcagcagcaggaggaggacaaggaggagaaggaggataaagagaaacta
agaaggaaagacaaggatctggagttcttatttcaggaagtagtccgagacagttcactg
gatgaacgcttaaagagagagctggcgagcaagaaatcagatacaaaatacaaagaaatg
ctgaaattcagggagaaactaccgtcatatgggaaaaaagaggagctggtccagctgatc
aactcgaaccgtgtcctggtggtgagtggggaaacagggtgtggaaagaccactcaagtc
acccaattcatcctggatgactacatcaatagaggcgtgggctccatgtgccgcgtggtc
tgcacgcagcctcgtcgcatcagtgccatctcggtagcagagcgtgtagcagcagagagg
gcagaaagtgtaggaaacggaaattcctgtggttaccaaatccgcctgcagagccggtta
ccacggagacaaggttcggtcctgtactgtacaacaggcattattcttcagtggctccgc
tcagacccattgttgtccagtatcagccacctggtgttggacgagatccacgagagaaac
ctgcaatctgatgttttgctcatcattgtgaaggagctactcaacctccgagacgacctc
agtgtcatcctcatgagtgccacactcaacgcggagaaattctctagatattttgacaac
tgtccagtgatcaacatccctggtttgacgttcccagtggaagaattcctacttgaagac
atagtggagatgaccaggtatcgtcctcagaatcaggaccgtcgccccacatggaagaga
ggcttttggcaggggcgcaacgccagacctgagaaggaggagaaagaggctgaatacaag
gagagctggccttgttacgcacgcacactacagggcagatactctgacaacaccattcaa
acgctggagatgttggacaacgatgataagattgacctggagctgatcctggcactgatt
cgccatattgtactcagtgaagaggaaggagctatcttggtcttcctgcctggctgggac
aacatcagcagtctcaatgacctgctcatggctcagcagatgttcagatcagaacgattc
gttatcatccctctgcattccctcatgcctacggtcaatcagacgcaggtcttcaaaaga
cctcctcctggagttagaaagattgtgattgctacgaatatagccgagaccagcatcacc
atagatgatgttgtttttgtgatagatggaggcaaaattaaggagactaactttgacacc
aacaacaacatcagcactatgatggccgagtgggtcagcctggccaatgccaaacagagg
aaaggacgcgccggcagagtgtgtccagggaagtgctatcatctgtacaatggtctcagg
gccagtctgctggatgcctatcaattacctgaaatcatgaggacgccgctggaggagctg
tgcctgcagatcaagatattgaagctcgggtctatcgctcgattcctggagaaagctttg
gaccccccaactgaacaggccgtcaacctagccatcaagaacttgacagacctgaacgcc
ctggaccgcgtggagaatctaacagcgctgggtttccacttggctcgtctacctgtggag
cctcacattggcaaactcatcctgttcggagctctgttgggctgcctcgaccccgtactc
accattgctgcttcactcagcttcaaagaccctttcttcatacccctggggaaagagaag
atggcagacatgaggaggaagcacctgtctagaaactccaagagtgaccacctcactatt
gtcaatgccttccagggctgggaggaagccaaacagcgtggtggcaggtgtgagagggag
tactgctgggacaatttcctgtctgccaatacactccagatgctgcaaaacatgaagggc
cagtttgccgagcatctaatgcatgcaggctttgtcagcagcaaggaccccaaagacccc
aaatctaacgtcaactcagacaatgagaagttaataaaggcggtgatcgtagctggtctg
tacccgaaggtggccatgatcagaccatcacacagcaaaaagaggccgggggctaaggtg
tacacccaggctgatggaaaggtgtgtatccacccgaaatctgtcaacgccgaagagagt
gagttcaactacacgtggctcatctaccacctcaagatgagaacgagcagcatcttcctg
tacgattgcaccgaggtgtctccgttctcgctgctgttcttcggaggggacatcacaatc
cagaaggacggggaccaggagaccgtggcggtggaccagtggatcgtctttagatcccca
gcacggatcgctaaccttgtcaagagcttaaagaacgagctggattctctattggaggag
aaaattcgtaaccctgctcccgtggactggcaaaaccgccagtccaaagactgcgctgtc
atcacagccattatagacctcatcaccacccaggagaagcctacaggcggcacgaaaggc
cacggcagaccgtgggcgtctgccccgagaggacaacacgtgtacttcaacgacgatgac
gacgatgacgacgattaa
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