Larimichthys crocea (large yellow croaker): 104927678
Help
Entry
104927678 CDS
T04659
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104927678
Cell adhesion molecules [BR:
lco04515
]
Cadherins
Protocadherins
104927678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
MpPF26
TMEM154
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104927678
NCBI-ProteinID:
XP_010740108
LinkDB
All DBs
Position
X:38079942..38088208
Genome browser
AA seq
1193 aa
AA seq
DB search
MKSGKMKGLFLTRILKVLAVLALATQHVNGKTLKYQIYEEQKVGTVIARLKDDVADVLAK
LPSSVSLRFRAMQRGSSSFLTVREQDGEISIRTKIDREKLCEKNLNCSIQFDVLTLPTEH
LQLFHVEVEILDINDNAPQFARAVIPIEISESAAVGARIPLDSATDPDVGENSLYSYALE
PNNNFKIDIQSRTDGAKYAELVVLRELDREVRSGYELQYTASDRGVPPRTGSTLLKISVT
DSNDNSPIFEKSSYVINLPENSPVGTLLIDLNATDADDGTNAKIVYSFSSHVSPKIMETF
KINPDSGHLTLIRRVDYEAINSYDIDVQAQDMGPNSMPAHCKILVKVVDVNDNKPDISIN
LMSSQGNGDAAYISEASPLDTFVALVRVEDLDSALNGEVECKLHGQGYFKLQRTYENNYM
ILTNVTLDREKRSEFSLTVVAEDRGTPSLSTVKHFTVHVTDENDNPPRFEKGRYEIFKSE
NNAPGAYLTSIMATDPDLDTNGQVSYSILENSVHGSSISTYVTIDPSNGAIYALRTFDRE
DVSRISFVVQAKDAGKPPLLSNATIILNILDENDNPPVIVVPQLWNFTADVPVLKFTEAG
NLVTVVRATDRDTGVNAELICSIVSGNEEGFFTIDPRTCEIKANASLENFPHEHAELTVV
VRDQGRESLSAKAVLKITWIMENHVPVMDQGESALDVSLIIIISLGAICAVLLVIMVVFA
SRCNREKKDTRHSYNCRVAESTHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHRSPSA
TPPMDRAQMGSRQNHHSRQSLNSLVTISSNHIPESFALELAHATPPVEQVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDCDMGRESPVDRLLLGEG
FSDLIHLEMHHRLHPAMRLCTDECRVLGHSDQCWMPPLSSPASSADYRNNMYIPGEESSQ
QPQIDDDQSSVDSERRKSFSTFGKESGNEEAGAGGDVAGGGGDACAAGGGAGSLLTEMNS
VFQRLLPPNIDSYAECTETSPPSSSSTTERGSGRGGNIAGNHSNNAVPQDNRRGLLPGGK
GPAYPPGVAAWAANTHYLNPGSGSVGTNHVSSSSSSSSSPSTSTSASTNGQPPHLKWLPA
MEEIPENYEEDDFEGVFHQGQGGKRSESRHEAGMDASELVHEINKLLQDVRQN
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctggaaaaatgaaaggactatttctgacaagaattttgaaagttctggctgtt
ttggcgctggcaacgcaacatgttaacggtaagacgctgaaatatcagatttatgaggag
cagaaggttggaaccgtcattgcccgtttgaaagacgatgtcgctgatgttctggctaaa
cttccgagctcagtgtcgctgcgcttcagagctatgcaaagagggagctcgtctttcctc
acggtgcgcgaacaggacggagaaatcagcatcaggaccaaaattgaccgtgagaaactc
tgcgaaaagaatctcaactgttccattcaattcgacgtgctgactctacccactgagcac
ctgcagctgtttcacgtcgaggtggaaatactggacatcaacgataacgcaccccagttc
gcccgagccgtcatccccattgagatctccgagagcgcggctgtgggtgcgcgcatcccc
ctggacagcgccacggaccccgatgtcggggaaaactcactgtactcgtatgccttagag
cccaacaacaacttcaagattgacatccagtccagaactgacggggctaaatacgcggaa
ctggtggtgctcagggagctggatcgagaggtgcgctccggttatgaacttcaatacacg
gcctctgataggggcgttccccccagaaccggttcgaccctcctcaaaattagtgttacc
gattcaaatgacaacagcccaatttttgaaaagtcatcatatgtcataaatctcccagaa
aattcacctgttggcactctgctcattgacttaaacgccactgacgcggatgacggcaca
aacgccaaaatagtctactcattcagcagtcacgtgtcccccaaaataatggagacgttc
aaaattaaccccgacagcggtcacctgaccctaatcaggcgtgtggactatgaggccatt
aactcttatgacattgatgtccaagcgcaggacatgggtccaaactccatgccagcacac
tgcaagatcctggtcaaagtggtcgacgtgaacgacaataaaccagatattagcatcaat
ctcatgtcctctcaggggaatggagacgcagcctatatatctgaggcttctcctctggac
acctttgtagctttggtgagggtggaggacttggactctgcattgaacggagaggtagag
tgtaaacttcatggtcaaggatatttcaaactgcagaggacctatgagaacaactacatg
attttgaccaacgtgactttggaccgagagaagcggtcagagttcagtctgacggtggtg
gcagaggaccgggggacccccagtctgtccaccgtcaaacacttcactgtgcacgtaacc
gatgaaaatgacaacccaccacgttttgagaaaggtcgatatgagatcttcaaatcagag
aacaatgcccccggagcatatctgacctccatcatggccactgaccctgatctagacacc
aatggacaggtgagctactccatcttggagaactctgttcatgggagttccatctccacc
tacgtcaccattgacccctctaatggtgccatctatgcactgcgtacctttgatagagag
gatgttagtcgtatctcctttgttgtgcaagccaaagatgcagggaaaccaccactgctc
agcaacgccacaattattctgaatatcctggatgagaatgacaaccctccggtcattgtg
gtaccccaactgtggaacttcactgctgatgtacctgtgttaaagttcacagaggctgga
aacttagtgactgtggtcagggcgactgatcgtgacacaggggtcaacgctgaactcatt
tgctccattgtcagtggcaacgaggagggcttcttcactattgacccaagaacctgtgaa
atcaaagctaacgccagcctggagaacttcccccatgagcacgctgagttgacggttgtg
gtccgagatcaaggaagagagagcctcagtgctaaggcggtgctgaaaatcacatggatc
atggagaaccacgtcccggtgatggaccagggcgagtctgccctagatgtctccctgatt
atcatcatatcccttggggccatctgcgccgtcctcctggtaatcatggtggtgtttgcc
tcgcgctgtaaccgggagaagaaggacacaagacactcctacaactgccgtgtagccgag
tcgacccaccaacatcaccccaagaagccctcacgccagatccacaaaggtgacatcacc
ctggtccccacggtgaacggcaccctgccaatcagagctcaccaccgctcaccttcagcc
acgcctcccatggatcgagcccagatggggagccggcagaatcaccacagccgccaatct
cttaacagcctagtgaccatctcatccaatcacattccagagagcttcgccctagaactg
gcacatgcaactccaccagtggagcaagtctcacagcttctgtccatgctccatcagggc
cagtaccagcccagacccagtttccgtggcaacaaatactcccgcagctacaggtatgca
ttacaagacatggacaagttcagcctgaaggacagtggccgtggggacagcgaggcgggg
gacagtgactgtgacatggggcgggaatcccccgtggacaggctgctgctgggggagggc
ttttctgacctgatacacctcgaaatgcaccatcgcctccacccagcaatgagactgtgc
acggatgaatgtcgcgtcctgggacactctgaccagtgctggatgccccccctctcctcc
cccgcttcctctgctgactaccgcaacaacatgtacatccccggggaggagtcctcccaa
cagccccaaatcgacgatgaccaatcctccgttgactcggagcgccgcaagagcttctcc
acttttggaaaggagtctgggaacgaagaggcaggggccgggggagatgtcgccggagga
ggcggtgatgcctgtgcagctggaggaggggctggatccctcctcacagagatgaactct
gtgttccagcggctcctcccccctaatatagactcgtacgcagagtgcactgaaacaagc
ccgccctcgtcctcatcaaccactgagagaggaagcggccgtggtggcaacattgctggt
aaccacagtaacaatgccgttcctcaggacaaccggagagggttgctgccaggtgggaaa
ggtcccgcgtaccctccaggtgtggctgcatgggcggccaatacccactatctaaatccc
ggaagtggatccgtaggaaccaaccatgtttcctcctcctcctcctcttcttcctccccc
tccacctccacttctgcctccaccaacggacagccgccacacctgaaatggctaccagcc
atggaggaaatcccagagaattacgaggaagacgattttgaaggcgtcttccatcagggt
cagggtggcaaacgcagcgagagccgccatgaggccggcatggatgctagtgagctggtc
cacgagatcaacaaactgctgcaggacgtcagacagaactaa
DBGET
integrated database retrieval system
