Larimichthys crocea (large yellow croaker): 104927690
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Entry
104927690 CDS
T04659
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104927690 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104927690 (cstf3)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104927690 (cstf3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
104927690
NCBI-ProteinID:
XP_010740129
UniProt:
A0A6G0J0W1
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Position
VIII:16273813..16284309
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AA seq
716 aa
AA seq
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MSTEGTADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAALLPETVVAPSAPALKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETVDAAVELIT
GRQPDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRSRQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagggaacagccgaccaggctgcagcagagtatattcccgagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaaccgatagataaagcaaggaagacatatgagcgacttgtcacg
cagttcccaagttctggcagattctggaaactattcattgaagccgagatcaaggctaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagttttgcacatcgac
ctgtggaaatgctacctctcatatgttcgagagaccaaaggaaagctgcccagctacaaa
gagaagatggcccaggcgtatgactttgccctggataaaattggcatggaaattatgtct
tatcagatttgggtggactacattaacttcctcaaaggagttgaggctgtgggctcttat
gcagagaaccaacggatcactgcagtacgcagggtgtaccagagaggctgtgtaaacccc
atgatcaacatcgagcagctctggagagattatagcaaatatgaagaggggatcaatgtg
cacttggccaaaaagatgattgaggatcgaagtagagactacatgaatgccagaagagtg
gcaaaggagtatgagactgtgatgaaggggctggacaggaatgcaccctcagtaccgccc
cagaactcaccacaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggaa
aaaagtaacccgctgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggtgctgggccatcatcccgacatatggtatgaggcagcacag
tacctggagcagtccagcaaactgctcgcagagaaaggggatatgaataattccaagctg
tttagtgacgaggcggccaacatctacgaacgtgccatcgggactcttctgaagaaaaac
atgctcctgtacttttcatttgctgactatgaagagagtcgcatgaaatacgagaaggtc
cacagcatctataataaactgctggccattgaagacatcgaccccacgctggtctacatt
cagtacatgaagtttgccaggagggcagagggcattaaatcaggtcgcaccatcttcaaa
aaggcccgagaggatctacgcacacgccaccacgtgtatgtgacagcagcactgatggag
tactactgcagcaaggataaatcggtggccttcaagatttttgagcttggtttgaagaaa
tatggcgacattccagagtacatactggcatacatcgattacctctcacaccttaacgag
gataacaacaccagggttctgtttgaacgtgtcctcacctcaggaagcttgtcaccagaa
aaatcaggagagatctgggctcggttcctggcttttgagagcaacataggagaccttgcc
agtattctgaaggtggagcgcagacggttcactgccttcaaggacgagtatgaaggcaaa
gaaacagccctgcttgtagatagatacaagttcatggacctgtatccatgctctgctagt
gaactcaaagcccttggatacaaggatgtgtctcgtgccaaactggcagcgctgctccca
gagactgtggtggctccctctgcacctgcactaaaggatgaagccgaccgtaaacctgag
taccccaaacctgacaccaatcagatgatccccttccagccacgtcacctcgcccctcca
ggtctacaccctgtccctggtggagttttcccagtccccccagctgctgttgtcctaatg
aagctgcttcctccgcctacgtgtttcactggcccctttgttcaagtggatgagcttatg
gaaactttcaggagatgcacacttcctgagactgttgatgctgctgtagagctgattact
ggtagacagcccgatgcgggaggggagggtaatggatccatggagaaccacgctgttgcc
aagtcactgaagaggcctaacgcagactccgacgaggaggatgacaaaggagccgtggct
ccacccatacatgacatctaccgttcacgccaacagaagaggattcgataa
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