Larimichthys crocea (large yellow croaker): 104927847
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Entry
104927847 CDS
T04659
Name
(RefSeq) transportin-2 isoform X1
KO
K18727
transportin-2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104927847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104927847
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104927847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Arm
IBN_N
TOR1L1_N
HEAT_EF3_N
TPR_IPO5
Vac14_Fab1_bd
Cnd1
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
MMS19_C
Adaptin_N
Ltn1_1st
Dopey_N
UNC45-central
INTS7_N
HEAT_MROH2B_1st
TPR_TTI1_C
DUF3689
TPR_IPO11
Caerin_1
DUF2573
Motif
Other DBs
NCBI-GeneID:
104927847
NCBI-ProteinID:
XP_019116491
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Position
X:23464590..23473558
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AA seq
891 aa
AA seq
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MEWQPDEQGLQQVLQLLKDSQSPDTATQRAVQEKLEQLNQFPDFNNYLIFVLTSLKSEDE
PTRSLSGLILKNNVKAHYQNFPPNVADFIKRECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSEDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALAGDEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEALSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLQHEGGEGEEGEDIDE
DEDDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPDWVIKESGILVL
GAIAEGCMQGMVPYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDAHLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYSQQPDQYEAPDKDFMIVALDLLSGLAEGLGGHVDT
LVARSNIMTLLFQCMQSQDTMPEVRQSSFALLGDLTKACFPHVKPCIAEFMPILGTNLNP
EFISVCNNATWAIGEICMQMGVEMQPYIAMVLNQLVEIINRPNTPKTLLENTAITIGRLG
YVCPQEVAAMLPQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAV
ASWVNPKDDLRDMFYKILHGFKEQVGEENWQQFSEQFPPLLKERLAACYGV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccagatgaacaaggtctgcagcaagtgcttcagctactcaaggactcc
cagtccccagacacagcgacacaaagagccgtgcaagaaaaactggagcaactcaaccag
tttccagatttcaacaactatctcatctttgtcctcacaagcctcaaatctgaggacgag
cccactcgctctctaagcggtctgatactgaagaacaacgttaaggctcactaccagaac
tttcctcccaacgtggctgacttcatcaagcgagaatgcctcaacaacatcggagaccct
tcgccgctcatcagagctacgatcggtatcctgatcacgaccatagcctctaaaggagag
ctgcagacctggccggagctcttgcctcagctgtgcaatctgctcaactcggaggactat
aacacctgcgagggttctttcggagcgctgcagaagatctgcgaggattcatcagagttg
ttggacagcgacgccctgaacagacctctcaacatcatgatccccaaattcctacaattt
ttcaagcactgcagccccaagatcaggtcccatgctatagcgtgtgtgaaccagttcatc
attggtcgagctcaagctctaatggataacattgacaccttcattgagagtctgtttgcg
ctggccggtgacgaggacagtgaagtgcggaagaacgtgtgcagggctctcgtcatgctg
ctggaggtccgcattgaccgtctcatcccacacatgcacagcatcatccagtacatgctg
cagcggacccaggacccggatgagaatgtggctctggaggcctgtgagttctggctgact
ctggctgaacagcccatctgtaaagaggccctgtcgggtcatttggtccaactgattcct
atcctggtgaatgggatgaaatactctgagattgacattattcttctaaagggtgacgtt
gaagaggacgaggcagttccagacagcgagcaagacatcaagcctcgcttccacaagtct
cgcacggtcactctgcagcacgaaggaggggagggcgaggagggggaggacattgatgag
gacgaggacgacgatgatgatacgctgtctgactggaacctacggaagtgttcggccgcg
gctctggacgttcttgccaacgtgtttcgtgaggagttgcttccccatctcctgcccttg
ctcaaaggcctgcttttccatcctgactgggtcatcaaggaatctggcatcctagtgctg
ggggctatcgctgagggctgtatgcaaggcatggtaccctacttgcctgagctcatcccc
cacctcatccaatgtttgtgcgacaagaaggccctggtccgctccatcgcctgctggacc
ctcagccgctatgcccactgggtggtcagccaaccccctgacgctcacctcaaacccctc
atgacagagctgctcaagcgcatactggacgggaataagagagtacaggaagcggcatgc
agcgcgtttgccaccctggaggaggaggcgtgtactgagctggtgccttacctgagcttc
atcctggacacgcttgtttttgcttttgggaagtaccagcacaagaacctgctcatcctt
tatgatgctataggaacacttgcagactctgtgggacatcatctcaaccagcctgagtac
atacagaagctgatgcctccgctgattgccaagtggaatgagctgaaagatgaagacaaa
gatctctttcctctgctggagtgtctgtcgtctgttgccacggccctgcagagcggcttc
ctcccatactgcgaacccgtctaccagcgatgtgtcaccctggtccagaagacactggct
caggccatgatgtacagtcagcagccagaccagtacgaagcacccgacaaggactttatg
atcgttgctctggatcttttaagcggcttggctgagggacttggtggccacgtggacacg
cttgtggcacgcagtaacatcatgactctgcttttccagtgcatgcagtcccaggatacg
atgcccgaagtaagacagagttcattcgctctgctgggtgacttaaccaaggcatgcttt
cctcatgtcaaaccgtgcattgctgaattcatgccaatcctcgggacaaatctgaaccca
gagttcatctcagtgtgcaacaatgctacctgggccataggagagatctgtatgcagatg
ggcgtggagatgcagccgtacatcgctatggttctgaaccagctggttgagattattaat
cgacccaacacccccaagaccctgctggagaacactgcaatcaccatcggccgactgggc
tacgtgtgtcctcaggaggttgctgccatgctgccacagtttatccgaccttggtgtaca
tctctgcggaacatcagagacaacgaagagaaagactctgccttccgcgggatttgcatg
atgattggtgtgaacccaggaggtgtcgtgcaggacttcatcttcttctgtgatgcagtg
gcctcctgggtgaatcctaaagatgatttaagagacatgttctacaagatcctgcacggc
tttaaggagcaggttggggaggagaactggcagcagttctcggagcagttccccccactg
ctgaaggagagactggcagcctgctatggcgtttag
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