Larimichthys crocea (large yellow croaker): 104927849
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Entry
104927849 CDS
T04659
Symbol
rfx1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104927849 (rfx1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Other basic domains
RF-X
104927849 (rfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
DUF3156
Spc42p
Motif
Other DBs
NCBI-GeneID:
104927849
NCBI-ProteinID:
XP_010740325
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Position
X:complement(23448983..23460508)
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AA seq
845 aa
AA seq
DB search
MATSGYSEDLQPQQANTVTIATPAATTPSSAKTAHFLPEIPPTSGTIASANQSATSSKTG
QDALCSQAPPTQAQSQKAVVLTTPTQHYVNPEIQHSAVQKSNGQGNSPQYIIVTVTEGSV
HSNDSLSDSSPPAPGVPTQVVQPVQTTQQQRSVLQAAKRIQTGHINNLQSVHINPEVEHV
YSGQVYVDGGGDTTFTTSTIRSSSYPFSDSPLYSQTPPASSSTYYEATPSSESDITGSVT
SQSVSVATAGANSGGAAAGGGGYVIQGGYVLGGGGGAGAGGGGGGGQSYSSPNSRAPPAT
VQWLCDNYEGAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGT
RGNSKYHYYGLRIKSGSPLLRLMDEQQHMAMRQQPFSQKNRIKPVQKTQGITNGTSGGLG
QQQGTALCDISAQVQQYQQFLEASRPLPDFVDVDLQDRTLPDGILIEHLKAFQTLYREHC
EAILDVMVNLQFTLVETLWKSFWRFSQSSDAESLNLHNESEKRLPKSCLVVLCKYEPVLH
WTKECDNLLYQTLVEMLIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMVRIKV
VCVGSFSQTLRRYTSLNHLAQAARAVLQNSAQINQMLSDLNRVDFTNVQEQASWVCQCED
RVVQRLEQDFKMTLQQQNSLEQWATWLDSVVSQALKPYEHNPVALPKAAKVFLLNWSFYS
SMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVALAKGVTPIAVMGEFASTIKSRI
SPDLEKEEEEDDEEEESEDETGDLVLQSSSLSAVDEEKEPMEPPAKQPRTSLNLHSLTET
HSTPT
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctggatactcagaggaccttcagcctcagcaggccaacacggtaaccata
gcaacacctgctgccaccacaccctcatcggcaaagactgcacacttcttgccggagatc
ccaccaacttctggaaccattgcatcagcgaaccaatcagccacctcctccaaaacggga
caggatgcactttgttctcaagcaccgcccacccaggcccagagccagaaggcagtggtt
ctgaccactcccacgcagcactatgtaaaccctgaaatccagcactctgcagtccagaag
agtaatggtcagggcaactcaccccagtacatcatagtaactgttacagagggctctgtt
cactccaacgacagtctgtcagactccagcccacctgcccctggtgtccctactcaggtg
gtccaaccagtgcagaccacccagcagcagagatcagtgttgcaggcagccaagaggatt
cagactggccacatcaacaacctccagtctgttcacattaacccggaggtggagcatgtg
tactctggccaggtgtatgtggatggaggaggcgacacgacttttaccacatccaccatt
cgatcgagcagctacccgttctccgactcacccctctactcccagacccctcccgcctcc
tcttccacctactacgaggccacacccagctctgagtcagacatcactggctctgtgacc
tcgcagtcggtttctgtggcaacagcaggagcaaatagcggaggagctgctgcgggcgga
gggggctatgtcattcagggaggttatgtgttaggagggggaggaggagcaggagcagga
ggaggaggaggaggaggacagagttattccagccctaactctcgtgccccacctgctacg
gtgcagtggctgtgcgacaactacgagggggcagagggggtgagtttgcctcgctgcacc
ctctactaccactacctgctgcactgtcaggagcagaaactagagcctgttaatgctgca
tcctttggcaaactcataagatctgtcttcatggggttgcgtacacggagattagggacc
agagggaactcaaagtaccactactatggtctgaggatcaaatctggttcccctctgctc
agactgatggatgaacaacagcacatggcgatgaggcagcagcctttctcacagaaaaac
aggataaaaccagttcagaagacccaggggatcaccaatgggacatcaggtgggctgggt
cagcagcagggcacggcactctgcgatatttctgcacaggtgcaacagtatcagcagttt
ctggaagcatcaaggccactgccagactttgtggatgttgatctgcaagatcgaactctg
ccggatgggatccttatagaacacctcaaggcctttcagactctctacagagaacactgt
gaggccattctggacgtgatggtcaaccttcagttcactcttgtggagacactgtggaaa
tccttctggaggttcagccagagcagtgacgcagagtcactcaacctgcacaacgagtct
gagaagcgtctgcccaaatcgtgcctggtggtgctgtgcaagtacgagccggtgctgcac
tggacgaaggagtgcgacaacctgctgtaccagactctggtggagatgctcatccctgat
gtactgagacccatccctagtgccttaactcaggccatccggaactttgccaagagtctg
gagaattggttaacaggcgccatgatgaatatcccagaagagatggttcgcataaaggtt
gtgtgtgtaggctccttctctcagacgctgcgccgctacaccagcttgaaccaccttgcc
caggcagcccgtgccgtcctccagaactctgcccagatcaaccagatgctctcagacctc
aaccgggttgatttcactaacgtacaggagcaggcatcctgggtgtgtcagtgtgaagac
cgtgttgtacagcggctggagcaggactttaaaatgactctgcagcagcaaaactctctg
gagcagtgggctacctggctggacagtgttgtctctcaggcactaaaaccctacgaacac
aaccctgtcgccctgccgaaggctgccaaggtcttcctgctcaactggtccttctacagc
tctatggtaatccgggacctcactctgcgcagcgctgccagttttggctcttttcacctg
atccgtttgctgtatgatgagtacatgtactacctgatagaacacagggtagccctggct
aaaggagtgacgcccattgcggtcatgggagaatttgccagcaccatcaagagccggatc
tctccagacctggagaaagaagaagaagaggacgatgaggaagaggagagcgaggacgag
actggagatctggtgctgcagtccagctctctgagtgcggtcgacgaggagaaggagccg
atggagccgcctgccaagcagcccaggacgagtttaaatctgcacagtctgactgagacg
cacagcacaccaacttag
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