Larimichthys crocea (large yellow croaker): 104927879
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Entry
104927879 CDS
T04659
Symbol
atrnl1
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lco04091
]
104927879 (atrnl1)
Lectins [BR:
lco04091
]
C-Type lectins
Others
104927879 (atrnl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_4
Kelch_3
Kelch_6
EGF_LMN_ATRN
Lectin_C
Kelch_2
CUB
PSI
EGF_TEN
NANM
EGF_Teneurin
EGF_2
EGF_laminin
TMEM100
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
104927879
NCBI-ProteinID:
XP_019120328
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Position
XVI:18534898..18592229
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AA seq
1378 aa
AA seq
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MDPGGKCKTKLFLFGPKLATNGDLRGINRYLVVYVLFYFVLFTHASPAKPCDKSCLSGKC
INGSCVCDRGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKTKCTWLIEGYPNAVLRLR
FNHFATECSWDHMYVYDGDSIYAPLVAVFSGLIVPEIRGNETVPEVETTSGYALLHFFSD
AAYNLTGFEIFYSINSCPNNCSSHGKCTPGNSAASRVYCECDKYWKGEACDIPYCRNNCG
SPDHGYCDLTGEKLCVCNDSWQGPDCSLTVPSTESFWVLPSVKPFGTSLARASHKAVVQE
KVMWVVGGYTFNYTSFQMILNYNLESGIWNTVPINSGPVPRYGHSLAAYQDDIYMFGGKL
EAGWGNVTDELWVFNVPSRTWQRRNPVVGPPAQAQIYAVEGHSAHSVLLDGGEAIMLVIF
GYSPIYSYVSNVQEYDLRSNTWLVPETKGAVPQGGYGHSSTYDVASSSVYVHGGYKALPA
NKYGLVDDLYRYDVNTRTWFILRESGFPRYLHSAALLSGTLLIFGGNTHNDTSLSNGAKC
FSADFLAYDIACDEWRLLPKPDLHRDVNRFGHSAVVSNGSMYVFGGFSGVLLNDVLVYRP
PSCQAFLAEEGCVKAGPGVRCIWSRGRCLPWEPSMANGSLSPAPFCPPKAATVDERCYRF
SDCASCTANTNGCQWCDDKKCISASSNCTSNVKNFTECPVRNEQVCSKLANCKSCSLNLN
CQWDQNQSECHALPAQQCSEGWSQVGEACLRINSSRESYDNAQHYCKNLNGNIASLTTSK
QVDFVLEELKKLQQQDKRLSPWVGLRKINVSYWGWEDMSPFTNSSLRWLPGEPSDSGFCA
YLEEPQVTGLRANPCTATAHGLICEKATGNPNQSTRPSCKKPCSLHTNCANCTNQAMECM
WCGSAQRCVDSTAYVISFPYGQCLEWQTGDCVAQNCSGLRTCSQCLEQPECGWCGDPSST
GKGLCMEGSYRGPMKRPVKQGQQGHAQDMSLEPGSCPKDKGYEWAFIQCPACQCNGHSTC
VNGSVCEQCRNLTTGPHCQTCMPGYHGDPTNGGKCQACKCNGHASVCQVLTGKCFCTTKG
IKGDQCQLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLIQEDDNHYTAINFMASPEQANK
NLDMSINASNNFNLNITWSVGSTAGTISGEEVPIVSKTNIKEYRDSFSCEKFTFRSNPNI
TFYVYVSNFSWPIKIQIAFSQHNNIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASR
RREQLMRERQQMASRPFASVAVALDARGEQTELFQPVVDGAPKPVAMEPCSGGKAAVLTV
LMRLPSGPSGLPPPGQSGIIVASALIDISQQKPTDFKDKSQALKNRKAHPPAHQGTCV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggaggtaaatgtaagaccaaactctttctttttggacccaaactagccacc
aacggtgatctacggggtatcaacagatacctggtggtctacgtgttgttttacttcgtg
ctgttcactcacgcctccccggcgaaaccgtgtgacaagagttgtctctctggaaaatgc
atcaacggatcatgcgtctgtgaccgaggatgggttggagatcagtgccagcactgccaa
gggaggttcaagttgacggagccctcaggatacctcacagatggtccaatcaactacaaa
tacaaaacaaagtgcacctggctcattgagggctatccaaatgcagttcttcggttaaga
tttaaccactttgctacagaatgtagttgggaccatatgtacgtctacgacggagactcg
atatatgctcctctggttgctgttttcagcggactcatcgtgccagagatacgaggaaac
gagacggttcctgaggtggagacaacttcaggctatgcactactacactttttcagcgac
gctgcctacaacttaacaggatttgaaatcttttactcgatcaactcttgtcccaacaac
tgctccagccacgggaagtgcacgcctggtaactcggccgccagcagagtgtactgtgaa
tgtgacaagtactggaaaggcgaggcctgcgacatcccatactgcaggaacaactgcggc
agcccggaccacggctactgcgacctcaccggggagaagctgtgtgtctgcaacgacagc
tggcaaggcccagactgctcgctcaccgtaccttcaacagaatccttctgggtcctaccg
agcgtcaagcccttcggcacgtcgcttgccagagcttcccataaggccgtggtgcaggaa
aaggtgatgtgggtggtgggtggctacaccttcaactacacctccttccagatgatcctc
aactacaaccttgagagcggcatctggaacacagtccccatcaacagtggccccgtgcca
agatacggccactcacttgctgcctaccaggatgacatctatatgtttggtggcaaactg
gaggccggttgggggaacgtaacagacgagctgtgggtgttcaacgtacccagccggacg
tggcagcggagaaaccccgtggtcggcccacccgcccaggctcagatttacgctgtggag
ggtcactcagcccacagcgtcctgctagacggcggcgaggccattatgctggtcatcttt
ggctactcccccatctacagctacgtcagcaacgttcaggagtacgacctgaggtccaac
acttggttagtgcctgagaccaaaggtgccgtccctcagggaggttacggccacagcagc
acgtacgacgttgccagcagtagtgtgtatgttcacggagggtataaggcgctgccggcc
aacaaatacggcctcgtcgatgacctctaccgctatgacgttaacacccggacatggttc
attctcagagagagcggctttccacgctacctgcactcggctgcgctcctcagcggcacc
ctgctcatctttggaggcaacacgcacaatgacacatcgctcagcaacggggccaagtgt
ttctctgccgatttcctcgcctatgacatcgcttgtgatgagtggaggctcctgcctaag
cctgacctgcacagagatgtcaaccgctttggtcactctgctgtggtcagcaatgggtcc
atgtacgtgttcgggggtttctctggtgtgctgctcaacgatgtgcttgtttaccgaccc
cccagctgccaggccttcttggcagaggagggctgcgtgaaggctggcccaggggtccgc
tgcatctggagcagaggccgctgtcttccctgggaacccagcatggctaatggaagcctc
agtcctgccccattctgcccccctaaagctgccacagttgacgagcgctgctaccgtttc
tcggactgtgccagctgtacggccaacaccaatgggtgccagtggtgcgatgacaagaag
tgcatctctgcctctagcaactgtacctctaacgttaagaacttcacggagtgtccagtg
cgcaacgagcaggtgtgcagcaagcttgccaactgcaagagctgctcgctgaatctcaac
tgtcagtgggaccagaatcagtcagagtgccacgctttgcccgcccagcagtgcagtgaa
ggatggagccaggtcggcgaggcctgcctgaggatcaactccagccgcgagagttatgac
aacgcccaacactactgcaagaacctcaacggaaacatcgcctcactcaccacctccaaa
caagtggactttgtcctggaggagctaaagaagctacagcaacaagacaagcggctgtct
ccctgggtcggcctgaggaaaatcaacgtgtcatactggggttgggaggacatgtcaccg
ttcaccaacagcagcctgcgctggctgcccggtgagcccagtgactctggtttctgtgcc
tacctggaggagcctcaggtgaccggtcttagagccaatccatgtacagccactgcccac
ggcctcatctgtgaaaaagccactggaaaccccaatcagagcacacgtccatcctgtaag
aagccgtgctcgctgcacaccaactgcgccaactgcaccaaccaggccatggagtgcatg
tggtgcggcagcgcgcagcgctgtgtcgactccaccgcctatgtcatttcgttcccctat
ggccagtgtctggagtggcagaccggagattgcgtggcccagaactgttcaggcctgcgg
acgtgttcccagtgcttggagcagcccgagtgtggctggtgcggagatcccagcagcacg
gggaaaggcctgtgcatggaggggtcttaccgggggccaatgaagaggccggtgaagcag
ggccagcagggccatgcccaggacatgagcctggagccgggcagctgccccaaagacaag
ggctacgagtgggccttcatccagtgccccgcgtgccagtgtaacggccacagcacgtgt
gtgaacggcagcgtgtgcgaacaatgtcgcaacctcaccaccggtcctcactgccagacc
tgcatgcctggttaccatggagacccaacaaatggtggcaagtgccaggcctgcaagtgc
aacggtcacgcgagcgtgtgccaggtgttaactggaaagtgcttctgcaccaccaagggg
atcaaaggggaccagtgccagctatgtgactcagagaaccgttaccttggcaatccactc
agaggaacctgttactacaatcttctcatcgactaccagttcaccttcagtctcatccaa
gaagatgataaccactacactgccatcaactttatggcctcacctgagcaggcaaacaag
aacctggacatgtccattaatgcatccaacaacttcaacctcaacatcacttggtcggtg
ggatcaacagctggaacaatctctggagaggaggtgcccatcgtatccaaaactaacatc
aaggaatacagagacagtttctcctgtgagaagttcacctttagaagcaaccccaatatt
accttttatgtctacgtcagtaacttctcatggcccatcaagatccagatcgccttctcc
cagcacaacaatatcatggaccttgtccagttctttgtgacgtttttcagttgcttttta
tcactactcctggtggcagcagtggtgtggaagatcaaacagacctgctgggcttcacgg
cgaagagaacaactgatgagagagcgccagcagatggccagccgtccgtttgcctcggtt
gccgttgcactggatgccaggggagaacaaacagaactgtttcagcctgtggttgacggt
gcacctaaacccgttgcgatggagccgtgctcaggagggaaagctgctgtgttgactgtc
ctcatgcgtctgccgtctgggccctcaggcttacctccaccaggacagtcaggaatcatc
gttgccagcgcgctcatagacatttcacagcagaaaccaacagattttaaggacaagtcc
caggctttaaagaaccgaaaagcccatcctccggcacatcaaggcacctgcgtctga
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integrated database retrieval system
