Larimichthys crocea (large yellow croaker): 104927927
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Entry
104927927 CDS
T04659
Symbol
rab11fip5
Name
(RefSeq) rab11 family-interacting protein 5 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104927927 (rab11fip5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104927927 (rab11fip5)
Membrane trafficking [BR:
lco04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104927927 (rab11fip5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
HH_MFP_RND
DUF4254
Motif
Other DBs
NCBI-GeneID:
104927927
NCBI-ProteinID:
XP_019131972
LinkDB
All DBs
Position
I:24874464..24886823
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AA seq
1459 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAAV
PEWNEECCFELLPGILEDGGRGAYPPGSGDLVLTVMHRVLIGLDVFLGQTIVPLDKIFQE
GMCPRDEWFKLNSKAGRKEKERGELQLTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRYAALSGSLGQPFGEEVGVAVETPDVEIAEEKRSKMKDFFKGR
LRKSSDTKSCSSLASESSVSSMASENPGPPPSLDLLSDPPSSPIYTTKVRVDTHYGETDL
AKKVLTSQHTTKALTHKRALSDEASKITTAFPRTNPAVESLKGQTMTQSKSSLCINGSHV
YDSEPPTPRISGAHPSKLVLLEKCSPLSRSLQNLTKRSEDKGSFADGRRWSFDKTKKDEK
EEEKESQASSPPIQQAQIGGQAATPGSSSPSPDKGRKLRKTLFSGGRSDSLPTKSDLNQA
ASTSEGRLRGWFGSGDSQNKPRLEVSPKVESSSDVPPPLPPRSPVPPQCSPPSATLSGLV
SPDDYNHTNPFTPSPSPSSTPISPSNPFPSRMQCNPFFEELIAEESQKSPPFASCSSSGS
SPFHYTTLLSQPCTPSPAHDVKPTNMAFIKRERPRPVARQISLPALLPKAAMPNSPNHCA
PRSMSESAGEWDDSFDAFASSRLNSPKGSLPQKQLRTSPTSSHRHNYLPVNTNNHAQELQ
VCEEEPPPLPPRRLLRNSVNEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQHGREGDSK
RNSISPDPQTSSENSDCLSINSQAYRNTTSPGLMSEEKLKKFKYEPLEDETDRWGGMLFE
QDLYGRICRGNYGQTNVNSHHLSVDAEETAGYKITSMNSGPIRVLDSEINVADLLNLSST
PPPQPDAKVVDITTTPVEQTNPPETTCINNNVSFSLTLGDLNMNVNNLDFSFIDSDGSSQ
SEVADTLKGISSLQPSEDSLASYHAETVTTPQDRFTLKDTYIPEMNSSFEIPASSNKLCK
VSPVCQDNCQDCELNNTVPHGNSSGQMAALSSQNQTSNPPDLQSKEDVPTGVDDFIKTQK
DFDDNGNPQGKIDTLNQKEPTSGVVSARFRPKGVSRQNSGSSPNNQNKSGEREFEQLLSL
VQNITRVSEGPLSYQPTKSTLSSLLLFNKQTDSLGESTKDQAHHNETNSQICSKDDTTNL
LTEKCVTGKSSDISFEDLHAKVAPRTPSKSKIGQSLQEPEPPSPSIPCALSLSADAQVTH
NPTPFCCPSIHPSSMGPSAGASTTLAVAPYTSSYSTISTTDQPLVDARHSLLPEETQPAS
NLPHLESRPHPVKPLTSSQSEKKEGRSVLEKLKSTIHPGRATHQVVAEPEKSQEVTVDNS
AQYQHLTNMELISLLLQQEMDMQKQQAASERQEAQLQKCEAELKKVKLQVRDLEDYIDNL
LLRIMEQTPTLLQVRTRHK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcactgatagatctggacgatgatcagcgatgggtgccaacacatgtgaatgtc
actgtcctccgcgcaagaggactgcgaaccaagggcaagcatggcagccgctacctctac
accatcatccaggtggggaaggagaagtacaccaccgggctggtggagaaagcggctgta
cccgagtggaacgaggagtgctgcttcgagctgctcccggggatcctggaggacggcggc
cgaggcgcataccccccggggagcggggacctggtcctcaccgttatgcaccgagtgctt
atcggacttgatgtgtttctcggtcaaaccatcgtccctcttgataagatatttcaggag
ggaatgtgtccacgagatgaatggttcaagctcaactctaaggcaggaagaaaagaaaag
gaacgaggtgaacttcagctaacagtccagttcactcgcaacaacatgacagccagcatg
ttcgacctcaccatgaaggacaaacctcgctctgcttttggcaagctcaaggatcgtgtc
acagggagaaagaggggggacgtagagtcttcctcggccattgtgccaggccgctacgcc
gccctgtcaggatccctggggcagccatttggggaggaggtcggagtggcagtggagact
ccagatgtagagatagcagaagagaaaagaagcaagatgaaagatttcttcaaaggaaga
ctgcgcaagtcatctgacaccaagtcatgctcatcactggcttcagagagtagtgtatct
tccatggccagtgaaaaccctggacctccgcccagtctggacctgctgtcagatcctccc
agctctcctatctatactactaaagtgagagtggacacccattacggagagacagattta
gctaaaaaagtgctcaccagccagcacaccacaaaggctctcactcacaagcgagccctc
agcgatgaagctagtaagatcacaacagccttccctcgaacaaatcctgcagtggagtct
ctcaagggtcagaccatgactcagtccaagtcttccttgtgtataaatggaagccacgtc
tacgactctgagccgcccactcctaggatctcaggagcccatccgtccaagttggtcctg
ctagagaagtgctccccactctctcgttccctgcagaacctcaccaagagaagtgaggac
aaaggttcctttgcggacggccgacgctggtcctttgacaagacgaagaaagacgaaaaa
gaggaagaaaaggaatctcaggcatcgtctcccccaattcaacaagctcagattgggggt
caggcagcgacgccaggttcctcctctccttcacctgacaaagggaggaagctaagaaag
acattattctctggagggaggagtgattccctaccaactaagtcagacctgaaccaagcc
gcttcaacatctgaggggcggctcagaggctggtttggctccggtgactcccagaacaaa
ccaaggctggaagtttctcctaaggtagaaagcagctcagatgtaccccctcccctccct
cctcgctcccctgtaccccctcagtgctcccctccctctgccaccctctctggtcttgtc
tcacctgatgactacaatcacaccaatcccttcaccccgtctccctctccctcctcaacc
cccatctccccttccaaccctttcccctcacgtatgcagtgcaaccccttttttgaagag
ctcatagctgaagagtcacagaagtctcctccttttgcgtcttgctcctcttctggctca
tccccctttcattacactactctgctctcccagccctgcacacccagccctgctcatgat
gttaaacctacaaatatggctttcataaagcgggaacgccccagaccggtagctagacag
atatctctccctgcattactacccaaagcagccatgcctaactccccgaaccactgtgcc
cctcgctccatgtcagagagtgcaggagaatgggacgactcatttgatgccttcgcctct
agcaggctcaactcacctaaagggagtcttcctcagaaacagctgaggaccagtccaact
tcatctcatagacataattatcttccagttaataccaataatcatgcacaagagcttcaa
gtatgtgaagaggagcctccgcctttgcctccacggagacttttaagaaattcagttaac
gagatttactccgatggctggctgcacagaggtcaagagctagctgtccacaaagaagct
tacctcctctcacaaaccggtgtagcctcgctgcaacatgggagagaaggagatagcaaa
agaaacagtatatccccagaccctcaaacgagcagcgagaactctgattgcctcagcatt
aactctcaagcatacagaaatactacttcaccaggattaatgtctgaagaaaagctcaaa
aagttcaaatatgaacctttggaagatgaaactgaccgctggggagggatgttgtttgag
caagatctgtatggacgtatatgtagaggaaactatggacaaaccaacgtaaacagtcat
catttatctgtggatgctgaagaaactgctggatataagatcacatctatgaactcagga
cctataagggttcttgacagcgagataaatgttgcagaccttttgaacttgtcatctact
cctcccccacagccggatgcaaaggtagtagatattacaaccactccagtagagcagact
aatccacctgaaaccacatgcatcaacaataacgtgtctttctcactaaccttaggagat
ctgaacatgaatgtgaacaatttagattttagttttattgattcagatggctcttctcag
tcagaggtggctgatactctcaaaggcatcagcagtttacaaccgtcagaagactcgcta
gcctcttatcatgcagagacagtgaccacgcctcaggataggttcactctgaaggacaca
tacatacctgagatgaactcttcctttgaaattcctgcatcatctaacaaactgtgcaaa
gtctctccagtatgccaagacaattgccaagattgtgaactgaataacacagtgccacat
ggcaactccagtgggcagatggctgctttgtcgtcacaaaatcaaacctctaatccaccc
gatcttcaatccaaagaagatgtacctacaggtgttgacgattttataaagacacaaaag
gactttgatgataatggaaacccacagggtaaaatagacacgcttaaccagaaggagcca
acttctggtgtggttagtgcacgttttagaccaaaaggagtgtcccgacagaacagtggt
agcagcccaaacaaccaaaacaaaagtggagagagagagtttgaacagttgttgtccctt
gttcagaatattaccagagtcagtgagggaccactgtcataccagcccactaaatcaact
ctttcttccttactgttatttaataaacagacagattccctaggagagagcaccaaagac
caagcacatcacaatgagactaattcacaaatatgttcaaaagatgacacaacaaacctt
cttacagaaaaatgtgtaacaggaaaatcctctgacatcagttttgaagaccttcatgca
aaagtagcaccaagaaccccttcaaagtcaaagattgggcaatctttgcaagagcctgaa
cccccttctccttccatcccttgtgcactctccctttcagctgatgcacaggttacgcac
aaccctacccctttctgttgcccctccatacatccctcaagcatggggcccagtgccgga
gccagcactactttggctgtggccccctacacctcctcctattctaccatctccaccact
gaccagcccctggtcgatgcacggcactcacttttgcctgaggagacacaaccagctagc
aacctgccccatctggagagcagacctcatccagtgaagccgttaacttctagccaatca
gagaagaaggaggggcgttcagttctggagaagttgaagtccaccatccaccctggacgt
gccacccaccaggttgtagcagaacctgagaagagtcaggaggtgacagtggacaactcg
gctcagtatcagcacctgaccaacatggagctgatctccctgctgctgcagcaagagatg
gacatgcagaagcagcaggcggcctccgaacggcaggaggcgcagctgcaaaagtgcgag
gctgagctgaaaaaggtcaagttacaagtccgagacctggaggactacattgataacctt
ttactgcggatcatggagcagacacccacgctgcttcaagtgcgcactaggcacaagtga
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