Larimichthys crocea (large yellow croaker): 104927977
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Entry
104927977 CDS
T04659
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03013
Nucleocytoplasmic transport
lco03015
mRNA surveillance pathway
lco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104927977
09122 Translation
03013 Nucleocytoplasmic transport
104927977
03015 mRNA surveillance pathway
104927977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104927977
03041 Spliceosome [BR:
lco03041
]
104927977
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104927977
Spliceosome [BR:
lco03041
]
Complex C
Other components
EJC/TREX
104927977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
HeH
Motif
Other DBs
NCBI-GeneID:
104927977
NCBI-ProteinID:
XP_019112789
LinkDB
All DBs
Position
X:complement(14337932..14352810)
Genome browser
AA seq
1730 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNDQEDHTEVNNSTSCP
PQAQDVTPALAEQHKPPGPSGGEGLFGAVNEGDANRNQEADVSGPPASGSVAMRIPGGEQ
RPERGSASNEAAADSDDEDSEDGEEDGDDDDWDSGARRRSLREPARVPSTRERSGASCQP
QQQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSPSTSSSGSSTS
GSRSSSPEPQRSGHAERKPGPLTLLARKMASEGAFSGAGWHGGDGEVERQDSSSPLATSF
PGRGPPEGLVSAITHTANTAGHVPFPMIPGTNQGVTGAQSPYIQVPVSVLKATATEERDR
KRENEIEREKALELERQERQRKLEEERERALALEREERERALEKERIEQQQALEREEREK
ALQRERELALERERQERELALAKEREEQEQALARERALELERQRELERQRALEEERLQRE
KEEREKREREEMEKVMELERMRALEQERKERERALEQERLERERVLEAERKEKERIEREK
ALEQERLERERLEREKALEIERLAMERAMEQQRLEMERVLEQDRLERERALEQERLERER
ALEQERLEREKAIELERMEREKALERERIEREKAQEQERLELERKERERIEREKALEQER
IEREKALEREREEKEKAEREAALEQERMVKEKAEKEKKERLEKEKKERLEREKALEQEKL
ERERALEKEKEKERALEQERLEKEKAMQKEKEEQERALEQEKERARMAEKERESHLPPSK
RGREIGLTPMPTPPPLSTGPGRKSSTDAGEQEDEDVHAPMSRSEAAESGAPVSPTPLSPL
SPFKKFRFLRDSQIQSSSTSMVIKRPRNFSDTPQPRASPVSPPTGVGERQQEGHQPSSKQ
EDPQMQTKQEVVAGTEATVSATLLQSPKKDRATSLASEDKEKAGSVKTEQAAKESAKKPK
EVDESKRPSSPDAAQRRGRDIKKEEKQARQRSSSNESSSSESDSGSSSSRSSGSSSSSQE
KTCSSSRGRREGKPDRDSSPQHRVTSEAQETPKASPCKKETSAEKSNTTADGDSHPKKLF
TEAPTREETQRKRKDSEGEKEKDKQRQVKEIAMAEPEKLPDTSEETPKAFSARKISLSSS
KSSPGTGSAEGEQESGTAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIRPCLGQEA
VVDLHPEEAVLSGAEDEERERSDQDLQIRRTVTQVVHSESQENGQKEAKRSRHEELEEDD
LQADGERAREHEEKMETSFPGAMETQSPLDTSHDVEINTVTPSDTLIRRSISQQKTGVSI
TIDDPVRTARQPSPPRGKVSSIVHISNLVRPFTLGQLKELLSRTGTLVEEGFWIDKIKSH
CYVTYCSSDEAVATRAALHGVKWPQSNPKVLSVDFCQQDELDFHKGLGAANKPAGAEEQV
AGSGRGRTSGLPSLLPERDQWAEREREMERRERARAEREWDRDKVREFGKPGEEKEGAPR
RSRSRERRRKERGKSKEKKTEKKEKAAEDPPAKLLDDLFRKTKAAPCIYWLPLTEEQFVQ
REAARAERTKEREKRRKEQEEEEEKKREEERKERMKAASGATGERSEGEKDKDRDRERER
DRDRGRDRDRERERERENDKRRDGYRRPGGSGAGGGRRSRSRSDPRERRR
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcgaagacgttaccctggacgggagaccgctccagtccctccgagtagca
gatttaaaagctgctcttgaggagagaggactcccgaaaagcggacagaagaatgctctc
attaaaagactcaagggggctctcatgttggagaatctgcagaggacctccaccgctcac
attggactgcagccaaactcccagattggtgaggaaatgagccagaacagcttcatcaag
cagtatctggctaaacaacaggagctcctgaggcagcgtctggagagagaggctcgcgaa
gcatatgaaacaaatgatcaagaggaccacacagaagtcaataacagtacctcatgtcct
cctcaagcccaggatgtcacaccagcattggctgagcagcacaagccacctggcccgtct
ggtggagagggattgtttggtgcagtaaacgagggtgatgccaaccgaaaccaggaggct
gacgtgtccggtcctcctgcttcaggctctgtggccatgcgcattcctggtggtgagcag
cggccagagaggggttctgcatccaatgaagccgcagctgacagcgacgatgaggatagt
gaggatggtgaggaggatggcgacgatgacgactgggacagcggtgctcggaggagaagc
ctgagagagccggccagagtgccctcaaccagagagaggtctggagcatcctgtcaaccc
cagcagcaacacatgccttcccttttgtcccctcagctccgccagccaacgcctcccccc
tctccacctccagagttatccttccccttgcctgacactcctaaacagagcccccctagt
ccagatgtagccccagctaggcgctcacctagtacctccagctctggttcctccaccagc
ggcagccgcagtagcagcccagagccacagaggagtggacatgccgagcgcaagcccggt
ccactgacgcttctggcacgcaagatggcgtcagaaggtgctttctcaggagcaggctgg
cacggtggcgatggggaagtcgaaaggcaggacagcagctctcccttggctacatcattt
cctggcagagggcctccagagggtctggtatcggctatcactcacacagccaacactgca
ggccatgtgccgtttcccatgattccaggcaccaaccagggtgtcaccggagcacaatcg
ccctatattcaagtacctgtgagtgtgctcaaggccactgcaacagaagagagggatagg
aagagggaaaatgagatagaaagagaaaaggccctagagctggaaaggcaagagaggcag
agaaaacttgaggaagagcgggaaagggctcttgcactggagcgagaggaaagagagaga
gctctggagaaagagagaatcgaacaacagcaggccttagaaagggaagaacgagagaag
gcattgcagagggagcgggaacttgctctagaacgagagaggcaggagagggaactggct
ttggctaaagagagggaagaacaagagcaagccttagcacgagaaagagccctggagctc
gagaggcagagggagctcgagaggcagagggccctggaagaagaacgtctgcagagagaa
aaggaggagagggagaagcgagagagagaagaaatggagaaagtgatggagttagaaaga
atgagggctttggagcaggaaaggaaagagagagaaagggctcttgagcaagagaggtta
gagagggaaagagttctggaggctgagagaaaggagaaggagaggattgagagagaaaag
gctttagagcaggaaaggttggaaagggaaaggttagagcgggagaaagccttggagata
gagagactagcaatggagagagctatggagcaacagagactagaaatggagagagttctg
gagcaagacagactagaaagggagagggctctggagcaagagagactagaaagggagaga
gctctggagcaagagagactagagagagagaaagccatcgagctggagagaatggaaaga
gagaaggccttggagcgagagagaatagaaagagaaaaagctcaagaacaagagaggtta
gagctcgagaggaaggaaagggagagaattgagagagagaaagcactggagcaagagagg
atagagagggaaaaagccctggaacgagagagggaggaaaaagagaaagcagagagagaa
gcagctctggaacaggagaggatggtgaaggaaaaggctgagaaggagaagaaagagaga
ctggagaaggagaagaaagagagactggagagggagaaagctctagagcaggaaaaactt
gaaagggagcgagccttggagaaggagaaagagaaagagagggctcttgagcaagaaagg
ttagaaaaggagaaagccatgcagaaagagaaggaggagcaggagagggccctggaacag
gagaaagagagggctaggatggctgaaaaggagagggagagtcacctccctccatccaaa
cgtggccgtgagattggtctcacccccatgcccactcctccccccctctccacagggcca
ggtagaaagtcatcgacagatgcaggagagcaggaagatgaagacgtccatgctccaatg
tcccggagtgaagcagcagaatccggtgcacccgtttcaccaacacctctgtcgcctctg
tctccattcaagaagttccggttcttaagggactcccaaattcaatcatcctcgacctcc
atggttatcaagcggccccggaacttctctgataccccccagcctcgggcctcacctgta
tccccccccactggtgttggggaacgacagcaggaaggacaccagccctcctctaaacag
gaagatccacagatgcagacaaaacaggaggttgtcgcagggactgaggccactgttagc
gccacgctgctccagagtcccaaaaaagatagggctacaagccttgcatcggaggacaaa
gaaaaagcaggttcagtgaagacggaacaggctgccaaggagtctgccaaaaaaccaaaa
gaagtggatgaaagcaagcgtccttcaagcccagatgctgcacagcgacggggaagagat
ataaagaaggaagaaaaacaagcaagacaaagatcatcgtctaatgagtcctcttcctca
gaatcggactccgggtcctcatcatctcggtcctctggctcgtcctcgtcttctcaagag
aaaacctgctccagttcaagaggtagaagggaagggaaacctgatcgagattcctcacca
cagcacagggtgacatcagaggctcaggaaactccaaaagcctccccttgcaaaaaagaa
acatctgcagagaaaagtaacacaactgctgatggagacagtcaccccaagaagctgttc
actgaagcaccaaccagagaggagacgcaaaggaagagaaaggacagcgagggagagaag
gaaaaggacaaacaaaggcaggtgaaggagattgccatggcagagccagagaagcttcca
gacactagtgaggagacaccgaaggccttctcagctcgcaagatctctcttagcagcagt
aaatcatccccgggcactggcagtgccgagggtgagcaggagtctgggaccgcggcaggt
cgcaagaggaggtggggctccagcacagctgtcactgctaagaaaccttccatcagcatc
accacagattcactcaagtctctcatcccagacattcggccgtgtctcggccaggaggca
gtagtggacctgcacccggaggaagctgtcctttctggggctgaggatgaagagagggag
cgctcggaccaggaccttcagatccgacgcactgtcacccaggtggtgcactcagaaagc
caggagaacggacagaaggaggcaaagaggagcagacacgaggagttagaggaggatgat
ctgcaggcagacggagagagagcaagggagcatgaagagaagatggagacctcatttcct
ggagccatggaaactcagtctccattagataccagccatgatgtagaaatcaacactgtg
acccccagcgacaccctcattcgtcgctccatcagccagcagaaaacaggagtttccatc
acgatcgatgaccctgtccgcacagcccggcaaccatccccacctcgaggcaaagtctcc
agcatcgttcacatcagcaacctggtgaggccgttcactctggggcagcttaaggaactt
ctcagcagaaccggcaccctggtggaagagggcttctggatcgacaaaatcaagtctcac
tgctatgtcacttactgtagctcagatgaggcagttgctacacgggcagctcttcatgga
gtgaaatggccacagagcaaccctaaagtccttagtgtagacttctgccagcaggatgag
ctggacttccacaaaggcttaggtgcagccaacaaacctgctggagcagaggaacaggtc
gctggctccggccgcggtcgaacatcgggcctgccctctctcctgccggagcgagaccag
tgggccgagcgcgagcgcgagatggagcgtcgggagagggccagagcagagcgcgagtgg
gatcgcgacaaggtcagagagtttgggaaacccggagaggagaaggagggagccccccgg
aggtcgcgctccagagagagacgacgcaaggagaggggaaagagcaaggagaagaagact
gagaagaaagagaaagcagctgaggatcctcctgcaaagcttctcgatgatctgttccgc
aaaactaaagcagctccttgcatatactggcttccactcacagaggaacagtttgtccag
cgggaagctgccagagcagagcggacaaaggagcgcgagaaacggaggaaggagcaagaa
gaggaagaggagaaaaaaagggaagaggagcgtaaggagaggatgaaggctgcaagtggt
gcaactggagagcggagtgagggtgagaaagacaaggacagagacagagagagggaaaga
gacagagaccgaggtagagacagagacagggagagggagagggagagagagaacgacaaa
cgcagggatggctaccgtaggccagggggcagcggggcaggcgggggcagacgctcgcgc
agccgcagcgacccgcgagaaaggcggcgttaa
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integrated database retrieval system
