Larimichthys crocea (large yellow croaker): 104928046
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Entry
104928046 CDS
T04659
Symbol
dcc
Name
(RefSeq) netrin receptor DCC
KO
K06765
deleted in colorectal carcinoma
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104928046 (dcc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104928046 (dcc)
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
DCC/UNC5 family
104928046 (dcc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_Rha78A_N
V-set
Fn3_VIN3
Interfer-bind
fn3_SORL1
C2-set_2
C2-set_3
Ig_5
Ig_4
Ig_ILCR1
EphA2_TM
Sp38
Fn3_SaeA_3rd
GH101_dom-5
Ig_PDGFR_d4
V-set_CD47
FAM176
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
104928046
NCBI-ProteinID:
XP_019114144
LinkDB
All DBs
Position
IV:complement(5412147..5652049)
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AA seq
1509 aa
AA seq
DB search
MELGLDGCIGDVWEVLVLRRRTGGPYLLLLLCWLLAAHPTAHASDATSSSSSSSSSLGSF
VDFTFTQEPQDTVTVRGGVLQLDCQAQSDAALGPPTITWRKDGVLLSTVVDERRQQLANG
SLLVQNVVHLRHHRPDEGEYQCLATLDGLGSIVSRTAKVTVAGPLKVVVPTESVSSYLGD
TALLRCEVSGDPMPVIRWQKNREDLPLIFDPDSRLATLPSGSLQVSRVQPPDSATYRCLA
DNPSSTRTGTDAELRVLPEPGVSRSLQFLQRPSRVSALLGTDAVLECSASGYPTPSIQWR
RGEELIQSWNKKYSLLAGSNLIIRSVTDDDSGGYSCTASNKNHNITANTELSVLVPPQFL
NYPTNTYAYESTDIELECAVTGSPPPTVRWIKNGEEVIPSDYFQIVDGSNLQILGLVKSD
EGFYQCVAENSAGSSQAMAQLLLREPVSPSPGVALPSAPRDLVPVLVSSRFVRLSWSPPE
EMGGAVQTYGIYYSQDGVERERSVNVSEPESLELTVSNLKPEESYSFRVIAYNDVGPGES
SAPLKITTKPDLQVPNRVESLQAEALSPTSIQVSWEPPSQPNGPILGYRLLWTESPSGKE
RSVEVNGNNYKMDGLNKFTEYTVRVLAINRYGPGTASEIASVTTQSDVPSAPPQNITLEV
VLSRSIKVAWQPPPRSTQNGIITAYKIKYRKTGIHGRRVLQEAIEPNNFWYLFTGLEKGT
QYSFQVAAMTANGTGPASEWYSAETPETDLDESQVPDQPSSLHVRPLPNSIIMSWTPPLS
PNILVRGYIIGYGVGSPYAETVRVDSKQRYYSIENLEPSSHYVISLKAFNNAGEGVPLYE
SAVTRSLTDPIDPSEDDLFHLFDKYPTPMPDTSTPMIPPVGVQAVALSSDSVRVSWADNS
MTKNQKSSEVRYYSVKWKTSYSTSGKYKSADTTALSHTVTDLKPNTMYEFAVMVTKGRKS
STWSMTAHATTYEAAPSSAPKDLTVISREGRPRAILISWQPPMEANGRITGYILYYTLDK
NMPIDDWLMEPITGDRLTHQVVDLNLDTVYYFRIQAKNAKGVGPLSEPAHFRTAKVEHPD
KMANDQGRGGDHAYWPSDTNLIDRSSINENPIGQMRPPHGSATPQKNSNLLVIIVVSVGA
VTMVVVVIVALICTRRSSAQQRKKRASHSASKRKGSQKDLRPPDLWIHHEEMEMKNMEKA
PSVAPSGHDSPIQSCQDLPQVAHSQSESQMGSKSSHSGADADEASSSISTLERSLAARRG
TRGKMMIPMDSQPSNTPVVSAIPVPALDSSQYPGILPSPSCGFTHNKFSLRPMPFPSLTV
DRGYTPAMPTDTSTNPLLQQQPPPQQATPLLPGSSAPPTEHVPGVGPVPGAPATVVAAAA
AEEAQAGNGRTIPTACVRPTHPLRSFTNPLLPPPMGTIDPKVYTSMMPQSSASLPKPQVK
TASLGQAGKARSPLLPVSVPTAPDLPEEGGTKLAEDSAANVYEQDDLSEQMASLEGLMKQ
LNAITGSAF
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggagctcggtttggatggatgtattggtgatgtttgggaggtgctggtgctgaggagg
aggacaggaggaccctacctgctgctgctgctctgctggctgctggctgctcaccccaca
gcgcacgcctcggatgccacctcatcttcctcctcctcctcatctagtctcggcagtttt
gtggacttcactttcactcaggagcctcaggacacagtgacagtgcgagggggtgtgctg
cagctcgactgccaggcccagtccgacgcggcgttgggacctccaaccatcacatggcga
aaggacggtgtcctgctgagcacggtggtggacgaacggcggcagcagctggctaacggc
tcactgctggtgcagaacgttgtgcatttgcggcaccaccggcccgatgagggtgaatat
cagtgcctcgctacactggacggactggggagcatcgttagccggactgccaaggtcact
gtagccggtccactgaaggtggttgtccccactgaatccgtctcctcgtacctcggcgac
accgccctgctgcgatgcgaggtctctggtgacccgatgcccgtcatccgctggcagaag
aacagggaagacctaccgctgatctttgaccctgactcccgcctggcgaccctgccgtct
ggctctctgcaggtcagccgtgtccagcccccagactcagccacgtatcgctgcctggct
gacaaccccagcagcaccaggacggggacggacgctgagctccgagtgctcccagagcct
ggggtgagcaggagcctccagttcctccagcgtccatccagagtatcggctctgctggga
accgacgccgtgctggaatgttccgcgtccggatacccgactccgagcatccagtggagg
agaggagaggaactgatccagagctggaataagaagtactctctgctggcgggcagcaat
ctgatcatcaggagtgtcactgacgacgactccggcggttacagctgtacggcgagcaac
aagaaccacaacatcactgcgaacacggagctgagtgtgctggtgcctcctcagttcctg
aactacccgaccaacacgtacgcttatgagtccaccgacatcgagctggagtgtgctgtg
acagggagcccgccgccgactgtccgctggataaagaacggagaggaagtcatccccagc
gactacttccagatagtggacggcagtaacctgcagattttgggtttggtgaagtcagac
gaaggattttatcagtgcgtggctgaaaactctgccggcagctcgcaggccatggctcaa
ctgctgctccgagagccagtgtcccccagccccggcgttgctctcccctctgccccccgc
gacttggtccctgtcctagtgtccagccgatttgtccgtctcagctggagccccccggag
gagatgggaggagctgtgcagacctatggcatttattactctcaggacggagtcgagagg
gagcggtcagtgaacgtgtcagagccggagtctttggagctgacggtctccaacctgaaa
ccagaggagagctacagcttcagggtcatcgcttacaacgacgtgggaccaggagagagc
tccgcccccctgaagatcaccaccaaacctgacctccaggttcccaacagggtggagtct
ctccaagctgaggctctgtcacctacctccatccaggtgagctgggaacctcccagccaa
ccaaacgggcccatcctgggctacagactgctgtggaccgagagcccgtccggcaaggaa
cggagtgtggaggtgaatggaaacaactacaagatggacggactcaataagttcacagag
tacacggttcgagttttggcgatcaaccgctatggaccaggcaccgcctcagagattgcc
agtgtcaccacccaatcagatgtgcccagcgctcctcctcagaacatcaccttagaggtt
gtcctgtccaggagcatcaaggtggcatggcagccacctccacgcagcacccagaacggc
atcatcactgcctacaagatcaaatacaggaagacaggaatacatggccgacgtgtactt
caagaggccatcgaacccaacaacttctggtacctgttcacaggtctagagaagggcact
cagtacagtttccaggtagcagcgatgacagccaacgggacaggtccggcaagtgagtgg
tactccgctgagacgcctgagaccgacctggatgagagtcaggtacccgaccagcccagc
tctctgcacgtcagacctctgcccaacagcatcatcatgtcctggactccacccctcagc
ccaaacatcctggttcgtggttacatcatcggctacggagtgggaagtccctacgccgag
acggtccgagtggacagcaagcagagatactactccatcgaaaacctagagccgagctca
cactatgtgatttccctgaaggcgttcaataatgccggagagggagttcctctgtacgag
agtgcggtcacacgatctctgacagaccccatagacccatctgaggatgacctcttccac
ctctttgataaataccccactcccatgccagacaccagcactcccatgatccccccggtg
ggggtccaagccgtggctctgtcctcggactcagtccgtgtctcctgggctgacaactcc
atgaccaagaaccagaagtcgtctgaggtccggtactactctgtcaagtggaagaccagt
tactccaccagtggaaaatacaagtctgcagacaccacggcactcagccacactgtcacc
gacctcaaaccgaacactatgtacgagtttgctgtcatggtcaccaaaggtcgcaagtcc
agcacctggagtatgacggcacacgccacaacgtatgaagcagctcctagctccgccccc
aaagatttgactgtgatcagtcgcgaggggcgaccccgcgccattttgatcagctggcaa
ccgccgatggaggcaaatggaagaatcacaggttacatcctgtactacacactggataag
aacatgccgatagatgactggttaatggagccgattaccggtgaccggctgacccaccag
gttgtggatctgaacctcgacacggtttattacttcaggatccaggccaagaacgccaaa
ggagtcggcccactgtctgaacccgcccacttcaggaccgccaaagtggagcatccagac
aagatggccaatgatcaaggtcgaggtggagaccacgcctactggccatctgacaccaac
ctgattgacaggagcagcatcaacgagaatcccattggtcagatgcgaccaccccatggc
agcgccacgcctcagaagaatagcaacctgctggtcatcatcgtggtttctgtgggagcg
gtcaccatggtggtcgtcgtcatcgtggcgctcatctgcacccgccgatcctccgcccag
cagaggaagaagagagcgagccacagcgccagtaagagaaagggcagccagaaggacctg
cgaccgcctgacctctggatccaccatgaggagatggagatgaagaacatggagaaagct
cccagtgttgccccctctggacacgactcgcccatccagtcctgccaggacctaccccag
gtggcacatagccaatcagagagccagatgggcagcaagagcagccactcaggagctgac
gccgacgaggcatccagcagtatctccactctggagcgctccctggctgccaggagggga
acacgaggcaaaatgatgattcctatggactcacagccgagcaacacaccggtggtcagt
gccatcccggtgccggctctggactcctctcagtatcctggtatcctgccttcaccttcc
tgcggcttcactcacaacaagttcagcctgagaccgatgcccttccccagcctgactgtg
gacagaggatacacaccagcgatgcccacggatacctctacgaatcctctcctccagcag
cagcctccaccccagcaggccactcccctcctcccaggctcctccgccccacccactgag
cacgtacccggggttggcccggtaccgggggcccctgccactgttgtcgcagctgcagcc
gccgaggaggcccaggctgggaatggccggaccatcccgacggcctgcgtgcgacccacc
cacccactgcgaagcttcaccaacccactgctgccgccacccatgggcaccattgaccct
aaggtttacacctccatgatgccgcagtccagtgcaagccttccaaagccccaggtgaag
accgcctctctcggtcaggctggtaaagcccgctcccctctgctgcccgtctcagtgccg
acggcgccagacttaccggaggagggaggaaccaaactcgcagaggattcagccgccaat
gtttacgagcaggacgacctttcggagcagatggccagtctagaagggctgatgaagcag
ctcaacgccattaccggctccgccttctaa
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