Larimichthys crocea (large yellow croaker): 104928122
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Entry
104928122 CDS
T04659
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6 isoform X1
KO
K10154
interferon regulatory factor 6
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104928122 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104928122 (irf6)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104928122 (irf6)
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104928122 (irf6)
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104928122
NCBI-ProteinID:
XP_010740648
UniProt:
A0A7T3UWH4
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Position
VI:9788148..9793020
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AA seq
491 aa
AA seq
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MSVTPRRVRLKPWLVAQVDSGRYPGLVWIDREAMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCEIPQPP
SNQGSSDAGSLTPQYEEIGEEDIPDTPESLPPYPSNGASPSPLILWSPMGSESSMPGSCP
PSNEVWPKEEPGKIWPKEEPVDVEMHPTPLNDMPPAPLPDPSMHPPSLPDALFASPETWI
SSLPMTDLEVQFQYRGKEMCPTATVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFPT
TEHIANDKQRVFTSRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPTSPNLIE
RQRKVKLFCLESFLSGVIAHQRGQTPIPPQFEINLCFGEEWPDGRPRERKLIMVQVIPVV
ARMITEMFSGDNTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWALPPGP
GLNIVQALQGQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcacccctcgtcgtgtccggctgaagccctggctggtcgctcaggtggacagt
ggacggtacccgggtctggtgtggattgaccgtgaggccatgcgcttcaggatcccatgg
aaacacgccacacgacacacaccccagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagaccgggaagttccaagagggagttgatgaacctgatcctgcaaagtggaaa
gctcagctgcgatgtgccttgaacaaaagcagagaattcaacctggtctacgatggcacc
aaagaggtccccatgaatcctttaaagatctatgatgtctgtgagatcccacagcctccc
agtaaccaagggtcttcagatgctggttctttgactccgcaatatgaagaaattggcgag
gaagatattccagatacaccagagtctctccctccatacccatccaatggtgccagcccc
tctcctctcattctgtggtctcccatgggctcagagtcctccatgccaggcagttgcccc
ccatcaaatgaggtctggcccaaagaggagcctggtaaaatctggcctaaagaggagcct
gtggatgtggagatgcaccccacacccctaaatgacatgcctcctgctcctctgcctgat
ccctcgatgcatcccccttctctacctgacgccctgtttgcctctccagaaacatggatc
agttccctcccaatgacagacctggaggtgcagttccaatacagagggaaagagatgtgt
cccacagcgaccgtcagtaacccgcagggctgcaggctgttctatggagacctcggcccc
atggtcaaccaggaggagctgttcgggcccgtgaatctggagcagctgcgctttccgacc
acagagcacattgctaatgataagcagagggttttcactagccgcctgctggatgtgatg
gatagaggtctaatcctggaggtcagcggccacgatatctatgcagtccgtctctgccag
tgtaaggtgtactggtctggaccctgtgctccaaatccaacttcaccgaatcttatagag
cgccagaggaaggtcaaactgttttgcctggagtcttttctcagtggggtgatagcccat
cagcgtgggcagacaccaatccctccacagtttgaaatcaacctgtgttttggagaggag
tggcctgatgggaggcccagagagaggaaactcatcatggttcaggttattccagtggtg
gcacgtatgattaccgagatgttttctggagacaacacacgatccttcgacagcggaagc
gttcgcctgcagatttcaatcccagatatcaaagacaacatagtgacccacctaaagcag
ctgtactgcctgctacagacccaccagggccaggacggctgggcattgccccctggccca
ggcctgaatatcgtccaggctctgcagggacagtga
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