Larimichthys crocea (large yellow croaker): 104928144
Help
Entry
104928144 CDS
T04659
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104928144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104928144
Transporters [BR:
lco02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
104928144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
104928144
NCBI-ProteinID:
XP_019124580
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MYYIPEASIRETTSCPHVIQMRHAGSMQPVCRRDAGVWHQTRSLLWKNLLIKWRTKQQSL
QELILPLLLLGLLILISTLNPHVYYGGISTMELERDDHFVKGLGYTPITNITNHIMEEVA
QEMHMQDRLEMFASEEDLENASLYEPSSYVGVVFLDSSATSYRLRFPYNQLPQPSDYTES
FANCFSSSVNCRAANYWYSGFIRLQSLIDAAIIQMQTKRSVWSEMDLNVVMMGQPGSVEV
QKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTAFWLSWGLLYAAL
VTTMSILMSIIATYTALFPNSDFFVIFFLIFLYGISSIFFSFMLTPLFKKPKFASTVGSM
LTVVFGCLSLFTVLMKDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLANGP
HPLYVPLLMLVVDCILYLLLAIYLDQVMPGEFRMRRSLVYFLKPSYWSKRRKRYVEVSSV
YDAEMKGAPGGDESIEPVSPEFRGKEAIRINNIQKVYKEKDNVVEALRGLTFDIYEGQIT
ALLGHSGAGKSTLMNILCGICPPTSGSATIYGSPVSEIADASEMKQLVGICPQFNIIFDV
LTVEEHLRIFAAIKGIPPADIDAEVTKVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIAIL
GDPKILLLDEPTAGMDPCSRHQVWTLLKSRRAGRVTVLSTHYMDEADILADRKAVISQGQ
LKCVGSSLYLKVKCGVGYHLRMSISESCDAERISSLVQQHVPKAKLSRQHEAELTFTLPF
ENMDTFPGLFSELDRQPNLGIINYGVSMTTLEDVFLRLEAEAEVNQADYSVFNREQAEDE
GDNGSLDDTDQRLLTFSDSKSDVVSGHALWRQQFSTVAWLHMLNMRRERKAFIYTLALFL
VFVAAVLVLSLVTGNIQIHSPDRQFLPIYLLKKNQAPRRYTTSLLVQNSSGSDISDFVHN
LESQNIKVEMMKHSDYMSAAPHSAAINVTGSSKGFRYSVAFNSTTVHSLPMAVNILSNAL
LRGLNGTGPIRTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTRDREIKC
RSTLRISGLVPSAYWCGQAAVDIPFYYLILSCMNIILFCFHSEDMLTSSNLTAVVLCTIG
FSPAMILFTYVFSFGFARVQSNRDFFSVISMMVCVVSASLVQLVNDIPWLTRNLHNFLCF
FNPLYPLMGCLNCITKATFLPTLYEDNFFWKNLVIAIVAPYLQCILLLFLLRWLEIHYGG
RTMKNDQFCRISSTPKPKVERNPEEGLNEDEDVQMEKARVKEALTCQSCEEKPVVVVSNL
RKQHKGRREGFSLNKTRKVATKNISFCVRKGEVLGLLGPNGAGKSTVMHMLSGDTEPTAG
QVLMGDYSTEFHQVDNNLEHVGYCPQVNPLWPRITLQEHLEIYAAIKGLKGQDVPGIIKR
VVNALELKDHLNKQAKTLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWRAI
RAAFKNHQRGAVLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGRGYSLEVKLR
EELTGLQQVALLHKEILRIFPHATRQESFATLRVYKIPMEDVKSLAKSFSQLESAKQMFN
FEEYNFSQCTLEQVFMEFAKEQENEEDEVGSLSTTFQWQRLRQDGPVSVNHTDSIVHQL
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgtattacatccctgaggccagcattagggagacgacttcttgtccacacgtcatccag
atgaggcatgctggaagtatgcagcccgtgtgcagaagagatgctggagtctggcaccaa
actagaagtcttctctggaagaacctgctcatcaaatggaggaccaagcagcagagtctt
caggaactgatcctacctctgcttctgttgggtctcctgatactcatcagcacactgaat
cctcacgtttattatggaggcatcagcaccatggagctggagcgtgacgaccacttcgtc
aaaggcctgggctacacaccgatcactaacattaccaaccacatcatggaggaggtggcc
caggagatgcacatgcaggatcgtctggagatgtttgccagcgaggaggacctggagaac
gccagcttgtacgagccttccagctacgtcggtgtcgtgttcctggacagctccgccacg
tcttacaggcttcgcttcccgtacaaccagctgccccaacccagcgactacacagaatct
tttgccaactgtttcagcagctcagtgaactgcagagcagctaattactggtactccggc
ttcatccgcctccagtccctgatcgatgcagccatcatccagatgcagacaaagcgctcg
gtgtggagtgagatggacctgaatgtcgtcatgatgggtcagccaggttctgtggaggtg
cagaaattcccccacgccctcatctccatctacctggtcctggccttcacgccgttcgtc
accttcctcattgttaacgtggcagctgagaaggagcaccgcctcaaagacaccatgacc
atgatggggctctacgacacggcgttttggttgtcatggggcctcctgtatgctgctctg
gtaaccaccatgtccatcctgatgtccatcatcgccacgtacacggccctgttcccaaac
agtgacttctttgtcatcttcttcctcatcttcctgtatggaatatcatctatctttttc
tccttcatgctgactccgttatttaagaagcccaagtttgccagcaccgtgggctccatg
ctgacggtggtgtttggctgcctgtcgctgttcaccgtgctgatgaaggacttcccacag
ccgctggtctggcttctctgcctgctctcccccagcgccttctcaatcgggattgcacag
gtggtttacctggaggctcagggagatggtgctgtgttttcctcacttgccaacggcccc
catcctctttacgtgcccttgctcatgctggttgtggactgcatcctctaccttctgttg
gctatttacctggaccaggtaatgcctggtgagttcagaatgaggcggtccttggtgtac
ttcctgaagccgtcctattggtccaaacgcagaaagcgttacgttgaagtgagctccgtg
tacgacgccgagatgaaaggcgctcctggtggggacgagtccatcgaaccagtttcacct
gagttcagaggcaaagaagccatccgcatcaataacatccagaaagtgtacaaagagaag
gacaacgtggtggaggctctgagaggtttgacctttgacatttacgagggtcagatcacg
gctctgctcggacacagcggggctgggaagtccactctcatgaacatcctgtgtggcatc
tgcccgcccaccagcggctcggcgacgatctacggctcgcctgtgtcggagatcgcagac
gcgtcagaaatgaagcagcttgtgggaatttgccctcagttcaacatcatcttcgacgtg
ctgaccgtggaagagcacctgaggatatttgccgccatcaaaggcatcccaccagcagac
atcgacgctgaggtgaccaaagtgctgaaggatctggacttggagaagatcatgactgct
caggccaagaatctgagtggaggccaaaagaggaaactctctgtgggcatcgccattctt
ggagaccctaagattctgctcctggacgagcccacagccggcatggacccctgctccaga
catcaggtgtggacgctgctgaagagccgcagagccggcagagtcaccgtcctcagcacg
cactacatggacgaagctgacatcctggctgatcgtaaagccgtgatctctcaaggacag
ctgaagtgcgtcggctcctctctgtatctgaaggtcaagtgtggtgtcggatatcatctc
agaatgtctatcagtgagtcatgtgacgctgagaggatctcgtcattggtccagcagcac
gttcccaaggcgaagttatcccgacaacacgaggccgagctgacgttcactctgcctttc
gagaacatggacacgttcccgggcctgttctcggagctcgaccgtcaacccaatctggga
attatcaactatggcgtctccatgacaacactggaggatgtttttcttcgcctggaggca
gaagctgaagtgaaccaagccgactacagcgtgtttaatcgggagcaggcggaggacgaa
ggcgacaacggctctctggatgacacggaccagcggctgctgaccttctcagacagcaag
tcggacgtcgtgtcgggtcacgctctgtggcggcagcagttcagcaccgtggcctggctg
cacatgctgaacatgcgccgggagaggaaggccttcatctacaccctggccttgttcctg
gtgttcgttgccgcggtgctcgtcctgtctctggtcacaggaaacatccagattcactct
ccagaccgtcagtttctgcccatttacctcctcaaaaagaaccaggcgccccgcagatac
accaccagcctcctggtccagaactcctcaggctctgacatctctgacttcgtccacaac
ctggagtctcagaacatcaaagtggagatgatgaagcacagcgactacatgtctgctgct
ccccacagcgctgccatcaacgtaaccggatccagcaaggggttcaggtacagtgtcgcg
ttcaacagcaccacagttcactccttgcctatggctgtcaatatactgagcaacgctctc
ctgagaggtctgaacggcaccggaccgatccgaacctggaccaaaccgtttgattatcaa
atccccgatgctacgtcctacgctctggtgtacatcgaggccatcatactgggaatgctg
gcagctgggatgccggcgtatttcgcaatggaccacactcgagacagagagatcaagtgt
cgctccacgctgcggatctctggtctcgtaccgtcggcttactggtgcggtcaggcagcc
gtggacatccccttctactacctcatcctgtcctgcatgaacatcatcctgttctgcttc
cactctgaagacatgctcacctccagcaacctcaccgctgtggtcctgtgtactatcggc
ttcagtccagccatgattctcttcacctacgtgttttctttcggcttcgcccgagtccag
agcaacagggacttcttctccgtcatctccatgatggtgtgcgtggtgtcggcctcgctg
gttcagttggtgaacgacatcccctggctgaccagaaacctgcacaacttcctgtgtttc
ttcaaccctctgtaccctctgatgggctgcctcaactgcatcaccaaggcgaccttcctc
cccactctgtacgaagataacttcttttggaagaacctggtcatcgcgatcgtagctccc
taccttcagtgcatcctgctgcttttcctgctccggtggctggagatccattacggaggg
aggacgatgaaaaacgatcagttctgcaggatctcatccacgccaaagcccaaagtggag
aggaaccctgaagaagggctgaacgaggatgaggacgttcagatggagaaggcccgagtg
aaggaggcactcacctgtcagtcctgtgaagagaaaccagtggtggttgtgagtaacctg
aggaagcagcacaaaggcagaagagaaggtttttctctgaacaagacgaggaaagtggcc
acaaagaacatctcattctgcgttcgtaaaggtgaagttcttggactgttgggacccaac
ggagccggaaagagcaccgtcatgcacatgctgtcaggcgacactgaacccactgcaggg
caggtgctcatgggggactacagtacagagtttcatcaggtggacaacaatttggagcat
gtgggctactgtccacaggtgaaccctctgtggcccaggatcactctgcaggagcacctg
gagatctacgctgccatcaagggcctgaaaggacaggacgtcccaggaatcatcaaacgt
gtggtgaacgctctggagctcaaggaccacctgaacaaacaagccaagaccctgtcagca
ggactcaagaggaagttgtgcttcgccctgagcatgatcgggaatcctcagatcgtttta
ctggacgagccgtcatcaggcatggaccccaaatctaaacagcgcatgtggagggccata
cgtgctgcgttcaagaaccatcagcgaggagccgtcctcaccacgcactacatggaggag
gcggaggccgtgtgcgaccgtgtggccatcatggtgtccggccagctgaggtgtatcggc
tccatccaacatttaaaagggaagtacgggcggggctacagtctggaggtgaagctcaga
gaggagctgacggggctccagcaggtggcgctgctgcacaaagagatccttcgaatcttc
cctcacgccacccgacaggagagctttgccacgctgagggtttacaagatccccatggag
gacgtcaaatcactggccaagtctttctctcagttagagagtgccaagcaaatgttcaac
ttcgaagagtacaacttctcccagtgcaccttagagcaggtgttcatggagtttgccaag
gagcaggagaacgaggaggacgaggtcggctccctcagcacgaccttccagtggcagcgt
ctccgtcaggacggcccggtttccgtcaaccacacagacagcatcgtgcaccagctttga
DBGET
integrated database retrieval system
