Larimichthys crocea (large yellow croaker): 104928210
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Entry
104928210 CDS
T04659
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03030
DNA replication
lco03410
Base excision repair
lco03420
Nucleotide excision repair
lco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104928210 (rfc3)
03410 Base excision repair
104928210 (rfc3)
03420 Nucleotide excision repair
104928210 (rfc3)
03430 Mismatch repair
104928210 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lco03032
]
104928210 (rfc3)
03036 Chromosome and associated proteins [BR:
lco03036
]
104928210 (rfc3)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104928210 (rfc3)
DNA replication proteins [BR:
lco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104928210 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
104928210 (rfc3)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104928210 (rfc3)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104928210 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
104928210 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
AAA_5
ABC_tran
DUF1409
Motif
Other DBs
NCBI-GeneID:
104928210
NCBI-ProteinID:
XP_010740753
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All DBs
Position
II:925471..928453
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTVVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMGTCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCNVLTSVCKKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPATDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIMKGLVTELL
SNCDGQLKTEVAHMAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatatcggccgacttcgctcggtaaactggactatcacaaa
gagcaggcgactcagctgaagaacctggttcaatgtggcgacttcccacacttgttggtg
tacggtccatccggcgcaggcaagaagactcgcatcatgtgtctgctgagggagctgtac
ggagctggggtggagaagcttcgcatagagcaccagactgttgtggccccctcaaagaag
aaaattgagattaacacaatagccagcaactaccacctggaagtcaacccaagtgatgct
ggaaaccaggaccgtgtggtgattcaagagctgattaaaactgtggctcagtctcagcag
atccagtcaagcacccagcgagagttcaaagtggtgttgctaacagaggtggacagactc
acgaaagatgcccagcacgctttgcgccgaacaatggaaaagtacatgggcacttgccgt
ctcatcctgtgctccacctccacctccaaagtcatcggcccgattcggagccgttgtctg
gctatcagagttcctctgccgagcacagaagaggtgtgtaacgtcctgacatcggtctgt
aaaaaagagggtctgctcctcccacctgagctggccaagcaaatctctgagaagtctggt
cgcaacctccgtaaagcccttttgatgtgcgaggcctgcagagtgcagcagtatccattc
tcagtggaccaagatgtcccggcgactgactgggaggtctacctcagagaaacagctaat
gccatcgtcagccagcagagccctcagaggttgttggaggtccgtgccagactgtacgag
ctgctgactcactgcatccctcctgatatcatcatgaagggtctggtgacagagttgttg
agtaactgcgatggccagctgaagacggaggtggcccacatggcagcttactatgaacac
agattacagctgggcagcaaagccatctaccaccttgaggccttcactgctaagttcatg
gccatctacaagaagttcatggaggacggcctggatgccatgatgttttga
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