Larimichthys crocea (large yellow croaker): 104928270
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Entry
104928270 CDS
T04659
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104928270 (sorcs2)
Membrane trafficking [BR:
lco04131
]
Protein recycling
Others
Others
104928270 (sorcs2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BiPBP_C
DUF6786
Motif
Other DBs
NCBI-GeneID:
104928270
NCBI-ProteinID:
XP_019126258
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All DBs
Position
XIV:complement(847826..1174151)
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AA seq
1159 aa
AA seq
DB search
MASLRPENPVPAAAHLCVFLLTASAWMALPGPVRCDSGALNRRGGEDRMFDMGGGDGGSP
PGLPTDSDEEAVGAESSPRFRRALSREKQMSLLSSSFVLKGDATHNQAMVHWTGENSSVI
LILTKYYHADSTKVLESSLWRSTDYGTTYTKLNLMPGTTIVVTSFYICPTNKKKVVLVGS
SINERDQMLFISTDEGSSFQRQPISFTPETLVFHPKEEDKLLAYCKDGRLFASTDLGRKW
TLLQERVTKDKVYWSVSGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMVTAQFLGKI
DHNSLLVQDDYIFVKVTTGNRTKHYVSYRRNEFVQMRFPKYSLPKDVQIVSTDENQVFLA
LQEWYQSDTYNLYQSDPQGVYYSIVLENVRSTKQPEENVLIDILEVRGIKGVFLANQKID
GKVTTLITYNKGRDWEPLAPPATDMNGKPISCKAPDCHLHLHLRWADNPYVSGTVHTKDS
APGLIMGAGNLGSKLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIP
LKILKFSIDEGQTWTVHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFR
QSFPRQCTESDYDSWQLTDLQGELCIMGQERSFRKRKDTAFCIKGKSYTSALTTKPCQCS
EKDFNCDYGFERSNMEEKRCFADFWHDPDSPPEDCHLGQTYESTTGYRKVISNMCEGGLN
KQQSAKQHSCPLLPPQGLQVGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQVDLGDGFR
AIYQNLTVTDEPIQHRYENPGVYKVTVKAENMAGHDEATMYIQVTAPLQEVHLEVVPIAG
RNHEINLTAVVLPTEANLTVFYWWIGDNLRPTLTLQNSLLTRFPETGEVSVTVQASNGRS
MVQDTRTVRVYDNFQVIPLSFSTNLDQFNPNIPEWREDIGQVVTKILAKITGVPQESLVT
VVKPGLPTTADLYVLPVDSKPAKRSMFVDKRIPAIVQAFNDNNVSFVVRGGLQVLVMLAD
PNAGLGLIANDSTAATGETGYHGAAGGPGVWALAVIFLISIIATGSFILYKFKSPWLRTE
DAYPPLFFRKLPGSRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGN
HSGVVLSINSRELHSYLTS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgcgccccgaaaacccggtccccgccgctgcgcacctctgcgtctttctg
ctgaccgcctcggcctggatggcactgccgggacccgtgcgctgtgacagcggggcttta
aaccggcgcggcggggaggaccgtatgtttgacatgggcggcggagatggaggctccccg
ccaggtttaccgacggacagtgacgaggaagccgtcggcgcggagagctcaccccgcttc
aggagagcactgtcccgggaaaaacaaatgtccctgctcagcagttcgttcgtgctcaaa
ggggatgcgacccacaaccaggcgatggttcactggacaggagagaacagcagcgtcatc
ctgatcctgaccaagtactaccacgctgattccaccaaggtgctggagagctcactgtgg
aggtctacagactatggcaccacctacaccaaactcaacctgatgccagggacgaccatt
gtggtgaccagcttctacatctgccccaccaacaagaaaaaggtagttctggtgggttca
tctataaacgagagggatcagatgctgttcatcagcaccgacgagggttcctccttccag
cgccagcccatctccttcaccccggagacgctcgtcttccaccccaaggaagaagacaag
ctcctggcttactgcaaagatggcaggctctttgcttctacagacctgggacgcaagtgg
actttgcttcaggagcgggtgaccaaggacaaagtctactggtcagtgtctggtgtggac
gtggatcctgatctggtgcacatggaaatgcaagatacgagtggaggttacctgtatgtt
acctgtctcatccagaactgttcggacaaaatggtgacggctcagttcctcggcaagatc
gaccacaactcgctgctggtgcaggacgactacatatttgtcaaggtgaccacagggaat
cgcaccaagcactacgtgtcctatcggcgtaatgagtttgtccagatgaggtttcccaaa
tactccctgccaaaggatgttcagatagtgagtacggacgagaaccaggtcttccttgcc
ctccaggagtggtaccagtcagacacatataacctgtaccagtcggacccccagggcgtc
tactactccattgtcctggaaaatgttcgcagcactaagcagccagaggagaatgtcctc
atcgacatacttgaggtacgtggtatcaaaggagtcttcctggccaatcagaagatcgat
ggcaaagtaacaaccctcatcacctataacaaaggacgagactgggaacccttggccccg
cctgccactgacatgaatggaaagccaatcagctgcaaagcaccggactgtcacctccac
ctccacctgcgctgggcggacaacccctacgtgtccggcactgttcacaccaaagactct
gctccaggtctcatcatgggtgctggtaaccttggttccaaactagtagagtataaggaa
gagatgtacatcacctcagactgtgggaagacatggagacaggttttcgaggaggagcat
cacatcctgtacctggaccatggtggggtgatcgttgccatcaaggacacctcaattccc
ctcaagatactcaagttcagcattgatgaaggacagacgtggactgttcacaacttcacc
agcacctccgtgttcgtcgatggactcctgagtgagccgggagatgagaccctggtcatg
actgtgttcggccacatcagctacaggtcagactgggagctggtcaaagtggacttcagg
cagtcttttccccgtcagtgtaccgagtctgactacgactcctggcagctcacagacctg
cagggagaattgtgcattatgggtcaggagcggagtttcaggaaaaggaaggacacagcg
ttctgcattaaaggaaagagctacacctcggctctcactaccaaaccctgtcagtgctcc
gagaaagacttcaactgtgactatggttttgaacgctccaacatggaggaaaaacgctgc
ttcgctgacttctggcatgatccagattcaccacctgaagactgccatctagggcaaacc
tacgagtccaccactggctacaggaaggtgatatctaacatgtgcgaggggggactaaac
aagcagcagagtgccaagcagcacagctgccctctgctgccccctcaaggactgcaggtc
ggcatcaaggggcagatgctggcggtggcacctggtgacgacatcacattcattgttcac
caggaacagggcgacaccagtagcacaaagtaccaggtggacctcggcgatgggtttcgg
gccatctaccagaacctgacggtgacagatgagcccatccagcatcgctatgaaaaccca
ggagtttacaaggtcacggtgaaggctgagaacatggcggggcacgacgaggccaccatg
tacatccaagtcacagcccctctacaggaagtccacttggaagtggttcccatcgctgga
agaaaccatgagatcaatctgacagctgtagttcttcccactgaggccaacctgactgtc
ttctattggtggataggagacaacctgcggcctacgctgactctgcagaacagccttctg
actcgtttcccggagacaggagaggtttcagtcactgtccaggcttctaacggccgatcc
atggtgcaggataccaggacagtccgagtctatgataacttccaggtcatccctctgagc
ttcagcacgaacttggaccagttcaatccaaacatcccagagtggagagaggacattggc
caggtggtcaccaaaatactggctaagatcacaggtgtccctcaggagtccctggtgacg
gtggtgaagccgggcctccccaccactgctgatctgtatgtcctccctgtggacagcaaa
ccagccaagaggagcatgtttgtcgataagcgtattccggccatcgtgcaggccttcaac
gacaacaacgtcagctttgtggtgcgaggaggtctacaggtgctggtgatgctagctgac
ccgaatgcagggctaggtctaattgctaatgactcaacagctgcaacaggagagactggc
taccacggggctgccggaggtccaggtgtttgggctctagcagtcatcttcctaatcagc
atcatcgccacaggctccttcatcctctacaaattcaaaagtccttggcttaggactgag
gatgcctatcccccgctgtttttcaggaagcttccgggcagccgcaacgtctacgcccag
atgcacaatgagaaggagcaggaaatgaccagccctgtcaatcacagtgaagacacccag
cacatcatccagggcgaggagttcattgacgacgacctggactcgcagactctaggcaac
cattcgggtgtggtcctgagcatcaactccagagaactacacagttacctgaccagctga
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