Larimichthys crocea (large yellow croaker): 104928373
Help
Entry
104928373 CDS
T04659
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104928373 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104928373 (smarcd1)
03036 Chromosome and associated proteins [BR:
lco03036
]
104928373 (smarcd1)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104928373 (smarcd1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104928373 (smarcd1)
PBAF complex
104928373 (smarcd1)
GBAF(ncBAF) complex
104928373 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104928373
NCBI-ProteinID:
XP_019113733
UniProt:
A0A6G0J448
LinkDB
All DBs
Position
VI:16545276..16562561
Genome browser
AA seq
516 aa
AA seq
DB search
MAARGGFQTAPTGGGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSGAQNHMYRSPMPG
PGYPRQGMPPSSRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNR
NQHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQK
RKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDP
RLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQ
RLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAG
LDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRA
EFYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagacggcaccgacgggtggtggtggtggaggtggagca
atgggacctggaccaccggtaccgggcgcaggaccaggaatgggtcccgggacaccttct
ggaaggatgggaccatcctccggcgcgcagaaccacatgtaccgctccccgatgcccggg
cctgggtacccgagacagggcatgcctccatctagccgtatgacaccacagggaccagca
atggggcccccaggatacggcaacagcccggtgtctcgccctgtgatgcctggcgtgatg
gacccgtctcgcaagaggcccgcaccccaacagattcagcaggtgcagcagcagaatcgc
aaccagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagagaa
ctggtcccagagtctcaggcttacatggatctgctggcttttgagaggaagctggaccag
accatcatgcgcaagaggctggatattcaggaggccctcaagaggcccattaagcaaaag
agaaaactgcggatctttatatcaaacaccttcaatcccgcaaagccggatgctgaggac
ggtgaaggcacagttgcatcatgggagctacgtgttgaggggcgtctgcttgaagatacg
gccgtgtccaagtatgaagccaccaaacagaagcggaagttttcctctttcttcaagtct
ctggtgatcgagttggacaaagacctgtatggtccagataatcaccttgtggaatggcac
aggactgccaccacccaggagactgatggtttccaggtgaagaggcccggtgatgtgggt
gttcgctgcaccgtcctgctcatgctcgactaccagccccctcagttcaagttggacccc
cggctggctcgtatgctgggtatccacacccagaccagacctgtcatcattcaggccctg
tggcagtatgtcaagacccacaaactccaagaccctcatgagcgtgagttcatcaactgt
gacaaatacctgcagcagatctttgagactcagcgaatgaagttctccgagatcccgcag
cgcttgcatgcactcttgatgcccccggagcccatcatcatcaaccatgtgatcagcgtg
gacccgaatgaccaaaagaagactgcttgctatgacattgacgtggaggtggatgacacg
ctgaagacccagatgaactccttcctgctctccacagcaagtcagcaggaaatagcagga
ctggacaataagatccatgaaaccatcgagaccattaaccagctgaagacccagagagag
ttcatgttgagttttgccagagatcctcagggctttatcaacgactggctgcagtcccag
tgcagagacctcaagaccatgacagatgttgttggaaacccagaagaagagcgaagagcg
gagttttactaccagccgtgggctcaggaggccgtttgtcgctacttctactccaaggtc
cagcagaggcgacaggagctggagcaggcgctcggcatcaggaacacctaa
DBGET
integrated database retrieval system
