Larimichthys crocea (large yellow croaker): 104928391
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Entry
104928391 CDS
T04659
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X2
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco02010
ABC transporters
lco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104928391
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104928391
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104928391
Transporters [BR:
lco02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104928391
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
104928391
NCBI-ProteinID:
XP_010740968
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All DBs
Position
XVII:28856268..28881179
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AA seq
2362 aa
AA seq
DB search
MGFFRQLFLLLWKNVTYRRRNKIQLIIELLWPLVLFVILIAVRHSHPPYKQSQCHFPNKA
LPSAGTLPWVQGIICNINNPCFHSPTPGEMVGQVGNFDNSILSRLFVDAQTLLSYSGNRS
FSGFQDLMESVRRLGERPGAWPNLPVKEYLRVNETFSTFLLTNSSLSPATVDQLLKARLN
FQVSMAGAQLQLKDIVCNASMLRRFLTVDGGEDAMNELQTQLCDVPADILQEAERLFLSQ
LDLTKFVTRDLLMANAEDLRVISQTVTSVSRQLAVLIDDFSSLSSFAEMNAAVRLLSPEN
RSSLPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDTDLDQDNNTTP
FCKSLIRGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVRQVMKEVNKTFEDLQILQELN
EVWVEVGPRIKNYMESSAEIQLLQDLLRRPEVAVLVNLRLENTSWTASRIAHFLSTPSPD
TPRQPGAPPTWLDIYNDLGHTITTLAQVTECFSLNKLEGLETEGQMVDRALELLEDRQFW
AGVVFLLPNSSSPDLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVSRILTGVQETTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIVKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSIVPFLISAELLIVLLKWGDILPYS
DPSVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNT
KHRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVEGDSYNFTTSIVMLYVDAF
IYAIAAWYIEAVFPGEYGIPKPWYFIFQMNFWAGIPLETGMPIPPAPTEHSEDHIEPEPT
NLSLGVNINNLVKIYKKGGKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRDDMDTIRGLLGVCPQHNVLFDILTVEEHVWFYGCLKGMSEAEVKAELD
TLLGDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSCFGSGYYLTVVKRE
GLETSTPSSTSISTSTSISTNKLPPLRDSESSMSEDTGLGSEASSSYLAALLSLAQHHIP
GARLVEESGREAVVNLPQTAAKDTSLAIFLCELDQRLIELGISSYGLSDSTLEEIFLRVA
EETGVDAEPEQQVGSPHRQQPSAGQRAERQHAEEPETEPQETDLLSGDGRGGIPMTGWWL
TWQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLVALLFSLIVPPFGKYPALQLQPWMY
GEQYTFFSNDAPGNPAMENLLEALLDEPGFGTNCMDKEEENNRAGPQCEKGRGGLFMRPQ
VPYTTWQMFSTGNWSRDRPSPDCQCSTEDVRRMLPDCPQGAGGLPPPQIKRLTGDILQNL
TSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGASGTQTLPHIDDVEDSVMAIRA
RYRVPQNSSLDHLLNRLPGFLAGLNSQNNVKVWYNNKGWHAMVSFVNVMNNGLLRASLPP
GPERRKHGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFVLFLIEER
VSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFISFQQQSYVSETNLPALVL
LLLFYGWSITPLMYPASFMFTVPSTAYVVLTSINLFVGINGSIATFVLELFVDEHLNEVN
RILKKVFLIFPHFCLGRGLIDMAKNQAMVDAFNRLGTKQTLDPLQWDFVGKNLFAMAAEG
VVFFIFTILLQYKFFIRFRPWWVEHEMPPLGPEDEDVTRERARVLNGKAQSDILTMINLS
KVYKAGMKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAITCGEAFLNHHSVL
TEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVTKVAQWGVKKLGLTQYA
EREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRAVV
LTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLDDTNFDPDSCPIS
PYMKNAFPSIELKERHQNVLQYQLPSHACCLARVFDVLGNNYEDLGIVDFSVSQTTLDQV
FVNFAKEQTDDLTEVVIGNRTVQTNVTVQPQPPITPPRSSKTLQQHEKSSDSKPKEGKST
KANANKVKSKEGKANGEKSSSTAMTRMPQPEETNQVSRRGSSGSNSSSGEVQGESSKHKA
GSSSKHPSALFMVASNTQDSAL
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcaggcagctcttcctcctgctctggaagaacgtcacataccgcaggagg
aacaagatccagctgatcattgagctcctctggccacttgtcctcttcgtcatcctcatc
gctgttcggcattcacatcctccttacaaacagagccaatgtcactttccaaacaaagct
ttgccatccgcaggcaccttgccctgggttcagggcattatctgcaatatcaacaacccc
tgcttccacagcccgacaccaggggagatggtgggccaagttggcaactttgacaactcc
atattgtctcgtctcttcgtcgacgcccagactcttctgtcctacagtggaaaccggagc
ttctctggctttcaggacctgatggagagtgtccgaagattgggagagagacctggagcc
tggccaaatctccccgtaaaagaatacctgcgagtcaatgagacattctccaccttcctc
ctgacgaatagcagcctgtcgcctgcgactgtggaccagttgctgaaggctcggctcaat
tttcaagtttctatggctggcgctcagctgcagctgaaagacatagtgtgtaatgcgagc
atgttgagacggtttctgacggtggatggaggagaagatgccatgaatgagcttcagact
cagctgtgtgacgtgccagccgacatcctgcaggaggccgagcgcctcttcctctctcag
ctcgaccttaccaagttcgttacgagagaccttctgatggctaacgctgaagacctccgg
gtcatcagtcagaccgtcacctcagtttctcggcagctggcagttctcattgatgatttc
tcgtctctgtccagttttgcagagatgaacgcagctgtccgtcttctgtctccggagaat
cgctcgtcactgcccagggagagttttcgtgctttttcaaggatcatgtgcggtcaccct
gaggttggcggtgagcgaatcccatcactcaactggtatgaagacaacgacataaaatcc
ttcttagggaaaaatggcactgaagacacagacctggaccaggacaacaacaccactcca
ttctgtaaaagtttgatccgagggctggagtccaaccctctgtctcgcattgtgtggcga
ggaataaaacctctgtttattggaaaactgctgtacacaccagacactcctgcagtacga
caagtcatgaaagaggtgaacaagacttttgaggacctgcagatcctccaggagctgaat
gaggtctgggtggaggttggaccacggatcaagaattacatggagagcagtgctgagatt
caactgctgcaggatttgttgaggcggccagaggtggccgtactggtcaacctgcgtttg
gagaacacatcctggacagcctcacggatcgcacatttcctgtccacaccctcgccagat
acgccaagacagcctggagcaccacccacctggctggacatctataacgacctcggccac
accatcaccactctcgcacaagtcactgagtgtttctccctgaacaagctcgaggggttg
gagactgaaggtcagatggttgatagagctctggagcttctggaggacaggcagttttgg
gccggtgtggttttcctgctgcccaactcttcatcccctgacctgccgccccatgtcacc
tacaaaatccgaatggacattgatgatgtgacccggaccaacaagatcaaagacaggttt
tgggatcctggtccagcagctgacccatttaatgacatgcgctacatttggggcggcttc
gtgtacgtccaggacctggtggaaagagctgtgagccgcatcctgaccggagttcaagaa
acaactggcatctacatccagcagatgccctacccctgctatgtggatgatgttttcctt
cgagtgctgaatcgctcactgccactgttcatgacactggcctggatctactcggtggct
atgatcgttaaaggcgtggtgtacgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctgggaacaggaacactgtggctcagctggttcatcagcagcatcgttcctttc
ctgatctctgctgaacttcttatagttctgctcaagtggggggacatccttccatacagc
gacccatccgtggtgtttttcttcctgacggcgtttgccaccgccaccatcatgcagtgt
ttcctcatcagcaccttcttctccaaagccaacctggctgctgcatgtggggggcttata
tactttggcctctacctgccctacgtactgtgtgtggcctggagagaccgcctcaacacc
aaacacagagtccttgctagttttctgtctcctgtggcctttggcttcggctgtgagtat
ttctctcagtatgaagagcaaggcgtgggcattcagtggtacaacctccgctccagccct
gtggagggagactcgtacaacttcactacctctatagtcatgctttatgtggacgccttc
atctatgccatcgcagcctggtacatcgaagcagtttttcctggtgaatatgggatcccc
aagccctggtactttatcttccagatgaacttctgggctggaattcccctggagacgggc
atgccgatcccccctgcacccacagagcatagtgaagatcacattgaaccagaacccact
aacctgtccctcggtgtgaacatcaataacctggtgaaaatatacaagaagggaggcaaa
ctggccgtcaatcacctcaacctaaagttctacgaggggcagatcacgtctttcctcggg
cacaacggagccggcaaaaccaccaccatatctgttctgactggcctgttcccacctacc
tctggcacagtgtacatcaaggggatggacatacgtgatgacatggacaccatccgggga
ttgctgggagtttgtcctcagcacaatgtcctgtttgacatattaacagttgaggagcat
gtgtggttttatggatgcctgaagggtatgtctgaagcagaggtgaaagccgagcttgac
actctgctgggtgacgttggcctgctgcacaaacgacacgaacagaccaaaaacctctct
ggtggcatgcagaggaagctctctgtggcgatagcatttgttggaggctctaaggtggtt
gtcctggatgaacccacggccggggttgatccttactcccgcagaggaatctgggatctg
ctgctcaaataccgcaaagacaggaccatcatcctgtccactcactacatggacgaggcg
gagttgctgggtgaccggatcgccatcatctcccaggggaagctgtgctgctgtggttca
ccgctctttctgaaatcctgctttggatctggctactacctcactgtggtgaagagggag
ggactggaaaccagcactcccagcagcaccagcatcagcaccagtaccagcatcagcacc
aacaagctgccccctctcagggacagtgagtcatccatgagtgaagacaccgggctggga
agtgaggcgagcagctcctaccttgcagcgttgctctctctggcacagcaccacatcccg
ggtgcgaggctggtggaggagtcggggcgcgaggcggtggtcaacctgccacagacggct
gcaaaggacaccagcctggcaatcttcctgtgtgaactggatcagaggctgatcgagctg
ggcatcagcagctacggcctgtcagacagcacactggaggagatctttttgcgagtggcg
gaggaaactggcgtggatgctgaaccagagcagcaggttggatctcctcacaggcagcag
ccatcagccgggcagagggcagagagacaacatgctgaagaaccagagacagaacctcag
gagacagacctactgagtggagatggccgaggtgggattcccatgaccggctggtggctg
acatggcagcagctgagggctctcttcatcaaacgctggctctatgctcgaaggagccgc
agaggtttcttcgctcagattgtcctgcctgctgtgtttgtgctggtcgctttgctcttc
agcctcattgtgcctccgtttggaaagtaccccgcactgcaactgcagccctggatgtac
ggagaacagtacaccttcttcagcaatgacgcgcctgggaacccggccatggagaaccta
ctggaagctctgctggacgagccaggttttggtaccaactgcatggacaaagaggaagaa
aacaatagggcgggtcctcagtgtgaaaaggggcgtggtggtctgttcatgcgaccacag
gtcccctacaccacctggcaaatgttcagcacaggcaactggagcagagacagaccctca
cctgactgtcagtgtagcacagaggacgtacgccggatgctccccgactgcccacagggg
gccggtggactgccgcctccacagattaagaggctgactggagacatcctccaaaatctg
acaagctataacatctctgattacctggtgaaaacctactctcagatcctcaagaaaagc
ttaaaaaccaagaagtgggtgaatgaattcagatacggaggcttctcccttggggccagc
ggcactcagactttacctcacatcgacgatgtcgaggactcagtaatggcaatcagggct
cgttatcgagttccacagaacagttcactggatcatctgctgaacagactgccgggtttt
ctagcaggactgaacagtcaaaacaatgtcaaggtgtggtacaataacaaaggatggcat
gccatggtgtcatttgtcaacgtgatgaacaacggcttgctgagagcgagtctgccacca
ggtccagagaggagaaaacacggcatcactgcctacaaccacccgctcaacctcaccaag
gaacaactcaccgaaatggccatgatgactacatcggtggacgttctagtttccatctgt
gtgatctttgccatgtcctttgtgccagctagctttgtcctttttctgattgaggagcga
gtcagcaaagccaaacaccttcaatttgtcagtggtgtcaaaccgatcctctactggctg
gccaacttcacctgggacatgctgaactacaccgtccctgccaccatggtggtgctgatc
ttcatcagttttcagcagcagtcatacgtctcagagaccaacctgcctgctctcgtcctc
ctgctcttgttctacggatggtccatcacccctctgatgtacccagcatcctttatgttc
accgtccccagcacagcctatgtcgttctgacctccatcaacctctttgttggaatcaat
ggcagtatcgccacctttgtcctggagctgtttgttgatgagcatctgaacgaggtgaac
aggatcctaaagaaagtgtttctcatctttccacacttctgcctgggacggggactcatt
gacatggccaaaaaccaggccatggtagacgccttcaatagactgggcacaaagcagacc
ctggaccctcttcagtgggactttgtggggaagaacctgtttgcgatggcagctgaaggt
gttgtcttcttcatcttcaccatactgctgcaatacaagttcttcattcgcttcaggccg
tggtgggtcgagcatgagatgcctcctctcggtccagaggatgaggacgtcaccagggag
agagcgagggtcctaaatggcaaagcccaatcagacattctcaccatgatcaacctgagc
aaggtttataaagcaggcatgaagccggcggtggatcgtctctgtcttgggattcctcgt
ggcgagtgttttggcctgctcggggtgaacggagcagggaagacctccacctttcgcatg
ctgaccggagacacggccatcacctgtggagaggctttccttaatcaccacagtgtgctg
acagagatggagcgagtccaccagctgatgggttactgtccacagtttgacgccatcagc
gacctgctgacgggtcgggaacatctggagctgtacgcccgcctacggggagtcccagag
gagtctgtcaccaaggtggcacagtggggcgtgaagaagctgggactgacccagtacgct
gagcgggaggctggaggctacagtggaggcaacaagagaaagctctccactgccatctct
ctcatcggggcgccgcctgttatattcctggatgagccgaccaccggcatggacccaaaa
gccaaaaggtttctgtggaactgcatcctcagcgtcaccaaagagggaagagctgtagtt
cttacatcccacagtatggaggaatgtgaggctctctgcaccagaatggccatcatggtc
aacggcagattccagtgtctcggatctgtacaacatctaaagaacaggtttggtgacggc
tacaccatcatcctccggctggatgacactaactttgacccggactcgtgtcccattagc
ccctacatgaagaatgctttccccagcatcgagctgaaggagcgtcaccagaacgtgctg
cagtaccagctgccatcacacgcctgctgcctggctcgtgtgttcgatgtgctgggcaac
aactacgaggatctgggcatcgtcgacttctctgtttcacagacaactctggaccaggtt
tttgtcaactttgccaaggagcaaactgacgacctcacagaggtggtcatcggcaacaga
acagtacagaccaacgtgaccgtccaaccacagccgccaatcacacctcctcggtcaagc
aagactctacagcagcatgagaaatcatctgacagcaaaccgaaagagggtaaatcaaca
aaggcgaacgctaacaaggtcaaatctaaagaaggcaaagctaacggagagaaaagcagc
agtacagcaatgaccagaatgcctcagccagaggagacgaatcaggtgagccgacgtggc
agcagtggatcaaacagcagtagtggtgaagttcagggagaatccagtaaacacaaagca
gggagctccagtaaacatccttctgcactctttatggtcgccagcaacacacaggacagc
gcactgtga
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integrated database retrieval system
