Larimichthys crocea (large yellow croaker): 104928412
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Entry
104928412 CDS
T04659
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03420
Nucleotide excision repair
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104928412 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
104928412 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lco03051
]
104928412 (rad23b)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104928412 (rad23b)
Proteasome [BR:
lco03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104928412 (rad23b)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104928412 (rad23b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
Dsc3_N
CUE
UBA_3
Ubiquitin_5
OTU1_UBXL
Metal_resist
CLU_N
Motif
Other DBs
NCBI-GeneID:
104928412
NCBI-ProteinID:
XP_010741001
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Position
IX:10510281..10517429
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AA seq
384 aa
AA seq
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MQITLKTLQQQTFKIDIDEEETVKTLKERIEEEKGKDHFSVSGLKLIYAGKILNDDTALK
EYKINEKNFVVVMVTKPKTASAAPSPAASAPSTTAPAAPPASSSSSETTTDTKPEERPSS
TAEPASTPVGSSEASTNTNLIDEAVSTLVTGPSYDAMVNEMMLMGYEREQVVAALRASFN
NPDRAVEYLLTGIPGRDQGPSTGPDTVAPPVSGAPAPAAPTSGISMPANTGSSPGAGGGN
PLSFLRNQPQFQVMRQLIQQNAALLPALLQEIGRENPELLQEISNHQEQFIQMLNEPNPE
AVPAGGGGGAGGVGGAGGTGGMAGDPAGGGQMSYIQVTPQEKEAIERLKALGFPEGLVIQ
AYFACEKNENLAANFLLQQNFDDD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcagataactttgaaaaccttacagcagcagacgttcaaaatcgacatcgacgaagag
gagacggtgaagacattaaaagagaggattgaagaggagaaaggaaaggaccatttttca
gtgtctggactgaagctgatatatgctggtaaaatcctcaatgatgacacagccctcaaa
gaatacaaaatcaatgagaagaactttgtggtcgtcatggtgacaaagcctaaaacagcc
tcggcagctccttcacctgccgcctcagctcccagcactacagcccctgcagcacctcct
gcctcatcgtccagctcagaaaccaccacagacaccaaaccagaggagagaccgtcctcg
accgctgaaccagcttccacccctgtcggaagctctgaggcttcaacaaacacaaaccta
attgatgaggccgtttcaactctagtgacgggcccgtcatatgacgccatggtgaacgag
atgatgctcatgggctacgagagggagcaggtggtagcagctctgagagcgagcttcaac
aacccagacagagctgtagagtacttgctcacaggtattccaggcagagatcagggccct
tcaacaggacctgatacagtggcgcctccagtgagtggcgctcctgctcctgctgcacct
acaagcggtattagcatgcccgccaacactggctcttcaccaggtgctgggggaggcaac
cccttgagttttctcagaaatcagccccagttccaagtgatgcgccaactcatccagcag
aacgccgcactgcttcctgcactgctgcaggagatcggcagggaaaaccctgagctgctg
caggagataagcaaccaccaagagcagttcatccagatgctgaatgaacccaatccagag
gcagtgccggcaggtggtggaggtggagcaggaggagtgggaggagcagggggaaccgga
gggatggcaggcgacccagctggcggaggtcaaatgagctacatccaggtcacgccacaa
gaaaaagaggccattgagaggctaaaagccttaggatttccagagggacttgttatacaa
gcctacttcgcttgtgagaagaatgaaaacttggccgccaacttccttttacaacagaac
tttgacgatgattag
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